Gene annotation
Transcriptome id Sobic.005G118400.1
Synonym Sb05g017160
Functional annotation expressed protein
UniProt A0A1B6PRW6
Pfam -
Panther DB PTHR36330 PTHR36330:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G55280 : Lipase/lipooxygenase, PLAT/LH2 family protein
RAP-DB (Rice) LOC_Os11g29900.1 : expressed protein
MaizeGDB (Corn) Zm00025a029722
Brachypodium PNT63636 , PNT63634 , PNT63635 , KQJ88506
Barley HORVU2Hr1G028540.6 , HORVU2Hr1G028540.4 , HORVU2Hr1G028540.2 , HORVU2Hr1G028540.13 , HORVU2Hr1G028540.12
Wheat TraesCS2B02G183700 , TraesCS2A02G158000 , TraesCS2D02G164400
Populus -


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cDNA sequences
Sobic.005G118400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G002700 expressed protein -
2 Sobic.005G068700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD kinase, putative, expressed K00858: ppnK, NAD+ kinase
3 Sobic.001G378100 relA-SpoT like protein RSH1, putative, expressed -
4 Sobic.001G540600 expressed protein -
5 Sobic.003G185900 protein phosphatase 2C, putative, expressed -
6 Sobic.001G504400 expressed protein -
7 Sobic.008G033000 CAAX amino terminal protease family protein, putative, expressed K07052: uncharacterized protein
8 Sobic.001G530900 expressed protein -
9 Sobic.002G056500 with no lysine (K) kinase 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@STE_PAK_Ste20_Slob_Wnk.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K08867: WNK, WNK lysine deficient protein kinase
10 Sobic.005G101200 ELMO/CED-12 family protein, putative, expressed -
11 Sobic.001G258200 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.009G121000 expressed protein -
13 Sobic.010G153201 - -
14 Sobic.010G043800 uncharacterized protein ycf45, putative, expressed -
15 Sobic.002G206300 tsi1-interacting protein TSIP1, putative, expressed -
16 Sobic.003G017100 ABC transporter, ATP-binding protein, putative, expressed -
17 Sobic.001G359300 cytochrome P450, putative, expressed -
18 Sobic.003G220100 - -
19 Sobic.010G125833 - -
20 Sobic.001G169900 seed maturation protein PM23, putative, expressed -


Gene co-expression network
sample Sobic005G118400 Sobic005G118400 Sobic010G002700 Sobic010G002700 Sobic005G118400--Sobic010G002700 Sobic005G068700 Sobic005G068700 Sobic005G118400--Sobic005G068700 Sobic001G378100 Sobic001G378100 Sobic005G118400--Sobic001G378100 Sobic001G540600 Sobic001G540600 Sobic005G118400--Sobic001G540600 Sobic003G185900 Sobic003G185900 Sobic005G118400--Sobic003G185900 Sobic001G504400 Sobic001G504400 Sobic005G118400--Sobic001G504400 Sobic008G033000 Sobic008G033000 Sobic005G118400--Sobic008G033000 Sobic001G530900 Sobic001G530900 Sobic005G118400--Sobic001G530900 Sobic002G056500 Sobic002G056500 Sobic005G118400--Sobic002G056500 Sobic003G017100 Sobic003G017100 Sobic010G002700--Sobic003G017100 Sobic001G169900 Sobic001G169900 Sobic010G002700--Sobic001G169900 Sobic010G002700--Sobic005G118400 Sobic010G043800 Sobic010G043800 Sobic010G002700--Sobic010G043800 Sobic010G002700--Sobic001G378100 Sobic007G136200 Sobic007G136200 Sobic010G002700--Sobic007G136200 Sobic003G276300 Sobic003G276300 Sobic010G002700--Sobic003G276300 Sobic001G198100 Sobic001G198100 Sobic010G002700--Sobic001G198100 Sobic010G002700--Sobic001G530900 Sobic001G258200 Sobic001G258200 Sobic005G068700--Sobic001G258200 Sobic005G101200 Sobic005G101200 Sobic005G068700--Sobic005G101200 Sobic005G068700--Sobic003G185900 Sobic005G068700--Sobic002G056500 Sobic008G129900 Sobic008G129900 Sobic005G068700--Sobic008G129900 Sobic005G068700--Sobic008G033000 Sobic001G217900 Sobic001G217900 Sobic005G068700--Sobic001G217900 Sobic002G390100 Sobic002G390100 Sobic005G068700--Sobic002G390100 Sobic002G206300 Sobic002G206300 Sobic005G068700--Sobic002G206300 Sobic003G073800 Sobic003G073800 Sobic001G378100--Sobic003G073800 Sobic001G378100--Sobic001G217900 Sobic001G378100--Sobic001G504400 Sobic001G077300 Sobic001G077300 Sobic001G378100--Sobic001G077300 Sobic001G378100--Sobic001G540600 Sobic001G536700 Sobic001G536700 Sobic001G378100--Sobic001G536700 Sobic006G232600 Sobic006G232600 Sobic001G378100--Sobic006G232600 Sobic009G170200 Sobic009G170200 Sobic001G378100--Sobic009G170200 Sobic001G378100--Sobic001G258200 Sobic001G540600--Sobic001G378100 Sobic001G540600--Sobic001G217900 Sobic001G540600--Sobic001G077300 Sobic001G540600--Sobic009G170200 Sobic001G540600--Sobic002G206300 Sobic010G231300 Sobic010G231300 Sobic001G540600--Sobic010G231300 Sobic004G179400 Sobic004G179400 Sobic001G540600--Sobic004G179400 Sobic009G207900 Sobic009G207900 Sobic001G540600--Sobic009G207900 Sobic001G540600--Sobic003G073800 Sobic003G185900--Sobic008G033000 Sobic003G185900--Sobic001G504400 Sobic003G185900--Sobic001G258200 Sobic010G067100 Sobic010G067100 Sobic003G185900--Sobic010G067100 Sobic007G105500 Sobic007G105500 Sobic003G185900--Sobic007G105500 Sobic004G215800 Sobic004G215800 Sobic003G185900--Sobic004G215800 Sobic003G185900--Sobic005G068700 Sobic009G038701 Sobic009G038701 Sobic003G185900--Sobic009G038701 Sobic003G036200 Sobic003G036200 Sobic003G185900--Sobic003G036200 Sobic001G504400--Sobic002G206300 Sobic007G103400 Sobic007G103400 Sobic001G504400--Sobic007G103400 Sobic001G504400--Sobic009G038701 Sobic001G504400--Sobic003G185900 Sobic001G504400--Sobic001G258200 Sobic010G125833 Sobic010G125833 Sobic001G504400--Sobic010G125833 Sobic001G504400--Sobic008G033000 Sobic001G180200 Sobic001G180200 Sobic001G504400--Sobic001G180200 Sobic001G504400--Sobic001G378100 Sobic008G033000--Sobic003G185900 Sobic008G033000--Sobic008G129900 Sobic008G033000--Sobic001G258200 Sobic008G033000--Sobic001G504400 Sobic008G033000--Sobic001G217900 Sobic008G033000--Sobic010G125833 Sobic008G033000--Sobic002G206300 Sobic008G033000--Sobic004G215800 Sobic008G033000--Sobic009G038701 Sobic001G530900--Sobic010G002700 Sobic009G215500 Sobic009G215500 Sobic001G530900--Sobic009G215500 Sobic001G530900--Sobic001G378100 Sobic007G185700 Sobic007G185700 Sobic001G530900--Sobic007G185700 Sobic001G530900--Sobic005G118400 Sobic005G084500 Sobic005G084500 Sobic001G530900--Sobic005G084500 Sobic003G332700 Sobic003G332700 Sobic001G530900--Sobic003G332700 Sobic001G465700 Sobic001G465700 Sobic001G530900--Sobic001G465700 Sobic003G217700 Sobic003G217700 Sobic001G530900--Sobic003G217700 Sobic002G056500--Sobic005G068700 Sobic002G056500--Sobic008G129900 Sobic002G056500--Sobic005G101200 Sobic002G056500--Sobic001G258200 Sobic003G314000 Sobic003G314000 Sobic002G056500--Sobic003G314000 Sobic001G359300 Sobic001G359300 Sobic002G056500--Sobic001G359300 Sobic002G056500--Sobic010G231300 Sobic002G056500--Sobic007G105500 Sobic002G056500--Sobic003G036200
Octagon: transcription factors


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