Gene annotation
Transcriptome id Sobic.008G151100.1
Synonym
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1Z5R6Z1
Pfam PF00564 PF07714
Panther DB PTHR23257 PTHR23257:SF491
NCBI CDD KOG0192; Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G16270 : Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
RAP-DB (Rice) LOC_Os12g40279.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a004537 , Zm00025a004544 , Zm00025a043174 , Zm00025a023950 , Zm00025a053750
Brachypodium KQJ86017 , KQJ86019 , KQJ86018 , KQJ86020
Barley HORVU5Hr1G016840.12 , HORVU5Hr1G016840.10 , HORVU5Hr1G016840.11 , HORVU5Hr1G016840.14 , HORVU5Hr1G016840.1 , HORVU5Hr1G016840.2 , HORVU5Hr1G016840.3 , HORVU5Hr1G016840.4 , HORVU5Hr1G016840.5 , HORVU5Hr1G016840.6 , HORVU5Hr1G016840.7 , HORVU5Hr1G016840.8 , HORVU5Hr1G016840.9 , HORVU5Hr1G016840.13 , HORVU5Hr1G016840.15
Wheat TraesCS5A02G063200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5B02G069200 , TraesCS5A02G063200 , TraesCS5A02G063200 , TraesCS5A02G063200 , TraesCS5A02G063200 , TraesCS5A02G063200 , TraesCS5A02G063200 , TraesCS5D02G074400 , TraesCS5D02G074400 , TraesCS5D02G074400 , TraesCS5D02G074400 , TraesCS5D02G074400 , TraesCS5D02G074400 , TraesCS5D02G074400 , TraesCS5D02G074400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G198800 myosin, putative, expressed K10357: myosin V
2 Sobic.001G381600 phospholipid-transporting ATPase, putative, expressed K14802: DRS2, phospholipid-transporting ATPase
3 Sobic.001G212300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myosin-2 heavy chain, non muscle, putative, expressed -
4 Sobic.003G191700 ELF3 protein, putative, expressed K12125: protein EARLY FLOWERING 3
5 Sobic.009G238000 suppressor of phythchrome A, putative, expressed K16240: protein suppressor of PHYA-105 1
6 Sobic.005G045000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed K09480: digalactosyldiacylglycerol synthase
7 Sobic.010G097600 OsLIM - LIM domain protein, putative actin-binding protein and transcription factor, expressed -
8 Sobic.003G229300 NLI interacting factor-like phosphatase, putative, expressed K17616: CTD small phosphatase-like protein 2
9 Sobic.007G198300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
10 Sobic.006G002300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.006G185100 ranBP1 domain containing protein, expressed K14295: NUP50, nuclear pore complex protein Nup50
12 Sobic.008G168300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@tentative name(PubMedID : 31536532)@nuclear transcription factor Y subunit, putative, expressed K08064: NFYA, nuclear transcription factor Y, alpha
13 Sobic.001G534700 plus-3 domain containing protein, putative, expressed -
14 Sobic.005G100700 mRNA-capping enzyme, putative, expressed -
15 Sobic.002G325300 acyltransferase, putative, expressed K13506: GPAT3_4, AGPAT9, glycerol-3-phosphate O-acyltransferase 3/4
16 Sobic.004G281800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@myb-like DNA-binding domain containing protein, expressed -
17 Sobic.003G155100 suppressor of Mek, putative, expressed K17491: SMEK, protein phosphatase 4 regulatory subunit 3
18 Sobic.004G341900 lecithine cholesterol acyltransferase, putative, expressed -
19 Sobic.004G355700 C2 domain containing protein, putative, expressed -
20 Sobic.001G220300 serine/threonine-protein phosphatase 2A regulatory subunit B subunitbeta, putative, expressed K11583: serine/threonine-protein phosphatase 2A regulatory subunit B''


Gene co-expression network
sample Sobic008G151100 Sobic008G151100 Sobic003G198800 Sobic003G198800 Sobic008G151100--Sobic003G198800 Sobic001G381600 Sobic001G381600 Sobic008G151100--Sobic001G381600 Sobic001G212300 Sobic001G212300 Sobic008G151100--Sobic001G212300 Sobic003G191700 Sobic003G191700 Sobic008G151100--Sobic003G191700 Sobic009G238000 Sobic009G238000 Sobic008G151100--Sobic009G238000 Sobic005G045000 Sobic005G045000 Sobic008G151100--Sobic005G045000 Sobic010G097600 Sobic010G097600 Sobic008G151100--Sobic010G097600 Sobic003G229300 Sobic003G229300 Sobic008G151100--Sobic003G229300 Sobic007G198300 Sobic007G198300 Sobic008G151100--Sobic007G198300 Sobic001G534700 Sobic001G534700 Sobic003G198800--Sobic001G534700 Sobic009G074400 Sobic009G074400 Sobic003G198800--Sobic009G074400 Sobic003G275700 Sobic003G275700 Sobic003G198800--Sobic003G275700 Sobic006G257800 Sobic006G257800 Sobic003G198800--Sobic006G257800 Sobic003G155100 Sobic003G155100 Sobic003G198800--Sobic003G155100 Sobic001G128300 Sobic001G128300 Sobic003G198800--Sobic001G128300 Sobic001G481900 Sobic001G481900 Sobic003G198800--Sobic001G481900 Sobic003G198800--Sobic008G151100 Sobic002G411600 Sobic002G411600 Sobic003G198800--Sobic002G411600 Sobic001G381600--Sobic008G151100 Sobic009G201300 Sobic009G201300 Sobic001G381600--Sobic009G201300 Sobic001G381600--Sobic007G198300 Sobic006G002300 Sobic006G002300 Sobic001G381600--Sobic006G002300 Sobic003G115900 Sobic003G115900 Sobic001G381600--Sobic003G115900 Sobic001G381600--Sobic001G212300 Sobic009G038900 Sobic009G038900 Sobic001G381600--Sobic009G038900 Sobic001G381600--Sobic003G198800 Sobic001G381600--Sobic003G155100 Sobic001G212300--Sobic008G151100 Sobic001G212300--Sobic003G191700 Sobic001G212300--Sobic009G038900 Sobic004G042200 Sobic004G042200 Sobic001G212300--Sobic004G042200 Sobic004G355700 Sobic004G355700 Sobic001G212300--Sobic004G355700 Sobic001G212300--Sobic001G381600 Sobic003G313300 Sobic003G313300 Sobic001G212300--Sobic003G313300 Sobic001G212300--Sobic007G198300 Sobic001G374100 Sobic001G374100 Sobic001G212300--Sobic001G374100 Sobic003G191700--Sobic004G042200 Sobic003G191700--Sobic003G313300 Sobic006G133900 Sobic006G133900 Sobic003G191700--Sobic006G133900 Sobic003G191700--Sobic003G229300 Sobic003G017100 Sobic003G017100 Sobic003G191700--Sobic003G017100 Sobic003G191700--Sobic009G038900 Sobic003G191700--Sobic007G198300 Sobic003G191700--Sobic003G155100 Sobic010G002700 Sobic010G002700 Sobic003G191700--Sobic010G002700 Sobic010G004300 Sobic010G004300 Sobic009G238000--Sobic010G004300 Sobic009G026500 Sobic009G026500 Sobic009G238000--Sobic009G026500 Sobic009G238000--Sobic001G534700 Sobic009G238000--Sobic003G191700 Sobic005G100700 Sobic005G100700 Sobic009G238000--Sobic005G100700 Sobic009G238000--Sobic008G151100 Sobic001G365900 Sobic001G365900 Sobic009G238000--Sobic001G365900 Sobic001G290100 Sobic001G290100 Sobic009G238000--Sobic001G290100 Sobic002G008900 Sobic002G008900 Sobic009G238000--Sobic002G008900 Sobic005G045000--Sobic003G313300 Sobic001G305600 Sobic001G305600 Sobic005G045000--Sobic001G305600 Sobic001G468700 Sobic001G468700 Sobic005G045000--Sobic001G468700 Sobic005G045000--Sobic003G017100 Sobic004G028500 Sobic004G028500 Sobic005G045000--Sobic004G028500 Sobic005G045000--Sobic003G191700 Sobic004G347800 Sobic004G347800 Sobic005G045000--Sobic004G347800 Sobic005G045000--Sobic008G151100 Sobic008G168300 Sobic008G168300 Sobic005G045000--Sobic008G168300 Sobic006G048600 Sobic006G048600 Sobic010G097600--Sobic006G048600 Sobic010G013800 Sobic010G013800 Sobic010G097600--Sobic010G013800 Sobic008G188900 Sobic008G188900 Sobic010G097600--Sobic008G188900 Sobic010G097600--Sobic008G151100 Sobic001G205200 Sobic001G205200 Sobic010G097600--Sobic001G205200 Sobic004G341900 Sobic004G341900 Sobic010G097600--Sobic004G341900 Sobic001G486300 Sobic001G486300 Sobic010G097600--Sobic001G486300 Sobic005G023900 Sobic005G023900 Sobic010G097600--Sobic005G023900 Sobic010G097600--Sobic005G045000 Sobic003G229300--Sobic003G191700 Sobic010G176200 Sobic010G176200 Sobic003G229300--Sobic010G176200 Sobic003G229300--Sobic006G133900 Sobic003G229300--Sobic004G042200 Sobic001G169900 Sobic001G169900 Sobic003G229300--Sobic001G169900 Sobic008G115900 Sobic008G115900 Sobic003G229300--Sobic008G115900 Sobic003G229300--Sobic007G198300 Sobic003G262200 Sobic003G262200 Sobic003G229300--Sobic003G262200 Sobic003G222900 Sobic003G222900 Sobic003G229300--Sobic003G222900 Sobic001G375100 Sobic001G375100 Sobic007G198300--Sobic001G375100 Sobic007G198300--Sobic003G155100 Sobic008G130100 Sobic008G130100 Sobic007G198300--Sobic008G130100 Sobic007G198300--Sobic003G191700 Sobic007G198300--Sobic009G038900 Sobic007G198300--Sobic003G229300 Sobic006G219600 Sobic006G219600 Sobic007G198300--Sobic006G219600 Sobic007G198300--Sobic006G133900 Sobic007G198300--Sobic001G381600
Octagon: transcription factors


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