Gene annotation
Transcriptome id Sobic.004G243400.1
Synonym Sb04g028410
Functional annotation copper methylamine oxidase precursor, putative, expressed
UniProt C5XZ69
Pfam PF02727 PF02728 PF01179
Panther DB PTHR10638 PTHR10638:SF37
NCBI CDD -
KEGG Orthology K00276; AOC3, AOC2, primary-amine oxidase
Gene Ontology GO:0009308; amine metabolic process GO:0008131primary amine oxidase activity GO:0005507copper ion binding


Orthologs (automatic annotation)
TAIR AT1G31690 : Copper amine oxidase family protein
RAP-DB (Rice) LOC_Os06g23114.1 : copper methylamine oxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a014956
Brachypodium KQK15622
Barley HORVU0Hr1G009050.1 , HORVU4Hr1G074620.11 , HORVU4Hr1G074620.10 , HORVU4Hr1G074620.12 , HORVU4Hr1G074520.1 , HORVU4Hr1G074620.8 , HORVU4Hr1G074620.3 , HORVU4Hr1G074620.2 , HORVU4Hr1G074620.5 , HORVU4Hr1G074620.4 , HORVU4Hr1G074620.7 , HORVU4Hr1G074620.6 , HORVU4Hr1G074530.3 , HORVU4Hr1G074530.5 , HORVU4Hr1G074530.4 , HORVU4Hr1G074530.6 , HORVU4Hr1G074620.9
Wheat TraesCS4D02G281700 , TraesCS4B02G282700 , TraesCS4A02G020900
Populus -


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cDNA sequences
Sobic.004G243400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
2 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
3 Sobic.009G144200 glycosyl transferase, putative, expressed -
4 Sobic.001G405000 MRH1, putative, expressed -
5 Sobic.003G098600 expressed protein -
6 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.003G176200 - -
8 Sobic.004G044100 expressed protein -
9 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
10 Sobic.006G060500 expressed protein -
11 Sobic.003G042100 MAR-binding filament-like protein 1, putative, expressed -
12 Sobic.003G420800 glycerol-3-phosphate dehydrogenase, putative, expressed K00006: glycerol-3-phosphate dehydrogenase (NAD+)
13 Sobic.008G130700 expressed protein -
14 Sobic.008G190500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plasma membrane ATPase, putative, expressed K01535: PMA1, H+-transporting ATPase
15 Sobic.007G090415 - -
16 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
17 Sobic.002G396200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptide deformylase, putative, expressed K01462: PDF, peptide deformylase
18 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
19 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
20 Sobic.002G033700 AIR9 protein, putative, expressed -


Gene co-expression network
sample Sobic004G243400 Sobic004G243400 Sobic001G021500 Sobic001G021500 Sobic004G243400--Sobic001G021500 Sobic009G055900 Sobic009G055900 Sobic004G243400--Sobic009G055900 Sobic009G144200 Sobic009G144200 Sobic004G243400--Sobic009G144200 Sobic001G405000 Sobic001G405000 Sobic004G243400--Sobic001G405000 Sobic003G098600 Sobic003G098600 Sobic004G243400--Sobic003G098600 Sobic002G003200 Sobic002G003200 Sobic004G243400--Sobic002G003200 Sobic003G176200 Sobic003G176200 Sobic004G243400--Sobic003G176200 Sobic004G044100 Sobic004G044100 Sobic004G243400--Sobic004G044100 Sobic008G008500 Sobic008G008500 Sobic004G243400--Sobic008G008500 Sobic001G021500--Sobic004G243400 Sobic002G377300 Sobic002G377300 Sobic001G021500--Sobic002G377300 Sobic001G021500--Sobic009G055900 Sobic003G165800 Sobic003G165800 Sobic001G021500--Sobic003G165800 Sobic008G190500 Sobic008G190500 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic010G123300 Sobic010G123300 Sobic001G021500--Sobic010G123300 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic009G144200--Sobic004G243400 Sobic007G001900 Sobic007G001900 Sobic009G144200--Sobic007G001900 Sobic008G064601 Sobic008G064601 Sobic009G144200--Sobic008G064601 Sobic009G144200--Sobic009G055900 Sobic009G144200--Sobic001G021500 Sobic003G134900 Sobic003G134900 Sobic009G144200--Sobic003G134900 Sobic009G144200--Sobic008G190500 Sobic004G168700 Sobic004G168700 Sobic009G144200--Sobic004G168700 Sobic010G126100 Sobic010G126100 Sobic009G144200--Sobic010G126100 Sobic001G405000--Sobic009G055900 Sobic001G405000--Sobic002G003200 Sobic001G405000--Sobic004G243400 Sobic003G071400 Sobic003G071400 Sobic001G405000--Sobic003G071400 Sobic008G163000 Sobic008G163000 Sobic001G405000--Sobic008G163000 Sobic001G275600 Sobic001G275600 Sobic001G405000--Sobic001G275600 Sobic002G201100 Sobic002G201100 Sobic001G405000--Sobic002G201100 Sobic001G405000--Sobic002G377300 Sobic001G405000--Sobic004G168700 Sobic003G098600--Sobic004G243400 Sobic004G203900 Sobic004G203900 Sobic003G098600--Sobic004G203900 Sobic003G098600--Sobic001G021500 Sobic003G098600--Sobic009G055900 Sobic003G098600--Sobic004G168700 Sobic003G098600--Sobic001G405000 Sobic003G098600--Sobic003G071400 Sobic007G166600 Sobic007G166600 Sobic003G098600--Sobic007G166600 Sobic001G099100 Sobic001G099100 Sobic003G098600--Sobic001G099100 Sobic003G352800 Sobic003G352800 Sobic002G003200--Sobic003G352800 Sobic009G153800 Sobic009G153800 Sobic002G003200--Sobic009G153800 Sobic004G344200 Sobic004G344200 Sobic002G003200--Sobic004G344200 Sobic002G003200--Sobic001G405000 Sobic008G059800 Sobic008G059800 Sobic002G003200--Sobic008G059800 Sobic006G001000 Sobic006G001000 Sobic002G003200--Sobic006G001000 Sobic009G162500 Sobic009G162500 Sobic002G003200--Sobic009G162500 Sobic001G066900 Sobic001G066900 Sobic002G003200--Sobic001G066900 Sobic002G003200--Sobic008G163000 Sobic008G130700 Sobic008G130700 Sobic003G176200--Sobic008G130700 Sobic007G123200 Sobic007G123200 Sobic003G176200--Sobic007G123200 Sobic001G275800 Sobic001G275800 Sobic003G176200--Sobic001G275800 Sobic007G090415 Sobic007G090415 Sobic003G176200--Sobic007G090415 Sobic005G121500 Sobic005G121500 Sobic003G176200--Sobic005G121500 Sobic009G102800 Sobic009G102800 Sobic003G176200--Sobic009G102800 Sobic003G029300 Sobic003G029300 Sobic003G176200--Sobic003G029300 Sobic003G176200--Sobic008G008500 Sobic004G151900 Sobic004G151900 Sobic003G176200--Sobic004G151900 Sobic004G044100--Sobic008G008500 Sobic003G042100 Sobic003G042100 Sobic004G044100--Sobic003G042100 Sobic006G178800 Sobic006G178800 Sobic004G044100--Sobic006G178800 Sobic003G333000 Sobic003G333000 Sobic004G044100--Sobic003G333000 Sobic004G044100--Sobic007G123200 Sobic004G044100--Sobic004G243400 Sobic004G044100--Sobic003G029300 Sobic004G044100--Sobic008G143600 Sobic004G044100--Sobic007G090415 Sobic002G064400 Sobic002G064400 Sobic008G008500--Sobic002G064400 Sobic009G083300 Sobic009G083300 Sobic008G008500--Sobic009G083300 Sobic008G008500--Sobic007G123200 Sobic008G008500--Sobic008G130700 Sobic002G190100 Sobic002G190100 Sobic008G008500--Sobic002G190100 Sobic008G008500--Sobic007G090415 Sobic001G142400 Sobic001G142400 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic008G008500--Sobic006G060500
Octagon: transcription factors


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