Gene annotation
Transcriptome id Sobic.007G090415.1
Synonym -
Functional annotation -
UniProt A0A1Z5R8R8
Pfam PF12695
Panther DB PTHR17630 PTHR17630:SF56
NCBI CDD KOG3043; Predicted hydrolase related to dienelactone hydrolase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G23600 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os08g14109.1 : retrotransposon protein, putative, Ty1-copia subclass, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G130700 expressed protein -
2 Sobic.001G275800 peptide transporter PTR2, putative, expressed -
3 Sobic.005G141000 plant protein of unknown function domain containing protein, expressed -
4 Sobic.005G203600 - -
5 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
7 Sobic.007G123200 heavy metal-associated domain containing protein, expressed -
8 Sobic.008G008500 protein phosphatase 2c, putative, expressed -
9 Sobic.001G215300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed -
10 Sobic.006G060500 expressed protein -
11 Sobic.003G176200 - -
12 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
13 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
14 Sobic.006G025700 - -
15 Sobic.001G142400 RIO1 family protein, expressed -
16 Sobic.003G029300 lachrymatory factor synthase, putative, expressed -
17 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
18 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
19 Sobic.001G229500 cytochrome P450, putative, expressed -
20 Sobic.006G060700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@basic proline-rich protein, putative, expressed -


Gene co-expression network
sample Sobic007G090415 Sobic007G090415 Sobic008G130700 Sobic008G130700 Sobic007G090415--Sobic008G130700 Sobic001G275800 Sobic001G275800 Sobic007G090415--Sobic001G275800 Sobic005G141000 Sobic005G141000 Sobic007G090415--Sobic005G141000 Sobic005G203600 Sobic005G203600 Sobic007G090415--Sobic005G203600 Sobic002G190100 Sobic002G190100 Sobic007G090415--Sobic002G190100 Sobic005G020200 Sobic005G020200 Sobic007G090415--Sobic005G020200 Sobic007G123200 Sobic007G123200 Sobic007G090415--Sobic007G123200 Sobic008G008500 Sobic008G008500 Sobic007G090415--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic007G090415--Sobic001G215300 Sobic008G130700--Sobic007G090415 Sobic008G130700--Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic008G130700--Sobic006G025700 Sobic003G157500 Sobic003G157500 Sobic008G130700--Sobic003G157500 Sobic003G176200 Sobic003G176200 Sobic008G130700--Sobic003G176200 Sobic008G130700--Sobic005G020200 Sobic008G130700--Sobic005G141000 Sobic008G130700--Sobic008G008500 Sobic008G130700--Sobic001G215300 Sobic001G275800--Sobic005G203600 Sobic001G275800--Sobic007G090415 Sobic001G275800--Sobic007G123200 Sobic001G229500 Sobic001G229500 Sobic001G275800--Sobic001G229500 Sobic001G275800--Sobic008G130700 Sobic001G275800--Sobic005G020200 Sobic005G218100 Sobic005G218100 Sobic001G275800--Sobic005G218100 Sobic001G275800--Sobic003G176200 Sobic006G001400 Sobic006G001400 Sobic001G275800--Sobic006G001400 Sobic002G065400 Sobic002G065400 Sobic005G141000--Sobic002G065400 Sobic005G141000--Sobic005G020200 Sobic005G141000--Sobic001G229500 Sobic004G038300 Sobic004G038300 Sobic005G141000--Sobic004G038300 Sobic002G209800 Sobic002G209800 Sobic005G141000--Sobic002G209800 Sobic005G141000--Sobic007G090415 Sobic005G190800 Sobic005G190800 Sobic005G141000--Sobic005G190800 Sobic005G218201 Sobic005G218201 Sobic005G141000--Sobic005G218201 Sobic005G141000--Sobic008G130700 Sobic005G203600--Sobic001G275800 Sobic005G203600--Sobic007G090415 Sobic005G203600--Sobic005G020200 Sobic005G203600--Sobic008G130700 Sobic005G203600--Sobic006G001400 Sobic005G203600--Sobic002G190100 Sobic005G203600--Sobic001G229500 Sobic005G203600--Sobic007G123200 Sobic005G121500 Sobic005G121500 Sobic005G203600--Sobic005G121500 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic005G020200--Sobic003G157500 Sobic005G020200--Sobic009G059100 Sobic005G200600 Sobic005G200600 Sobic005G020200--Sobic005G200600 Sobic005G020200--Sobic004G253800 Sobic005G020200--Sobic006G001400 Sobic005G056201 Sobic005G056201 Sobic005G020200--Sobic005G056201 Sobic005G020200--Sobic005G141000 Sobic005G020200--Sobic006G025700 Sobic005G020200--Sobic008G130700 Sobic003G029300 Sobic003G029300 Sobic007G123200--Sobic003G029300 Sobic007G123200--Sobic003G176200 Sobic007G123200--Sobic001G275800 Sobic007G123200--Sobic008G008500 Sobic007G123200--Sobic007G090415 Sobic005G227050 Sobic005G227050 Sobic007G123200--Sobic005G227050 Sobic004G151900 Sobic004G151900 Sobic007G123200--Sobic004G151900 Sobic007G123200--Sobic008G130700 Sobic001G358900 Sobic001G358900 Sobic007G123200--Sobic001G358900 Sobic002G064400 Sobic002G064400 Sobic008G008500--Sobic002G064400 Sobic009G083300 Sobic009G083300 Sobic008G008500--Sobic009G083300 Sobic008G008500--Sobic007G123200 Sobic008G008500--Sobic008G130700 Sobic008G008500--Sobic002G190100 Sobic008G008500--Sobic007G090415 Sobic001G142400 Sobic001G142400 Sobic008G008500--Sobic001G142400 Sobic003G071600 Sobic003G071600 Sobic008G008500--Sobic003G071600 Sobic006G060500 Sobic006G060500 Sobic008G008500--Sobic006G060500 Sobic004G109000 Sobic004G109000 Sobic001G215300--Sobic004G109000 Sobic001G215300--Sobic001G142400 Sobic001G215300--Sobic002G064400 Sobic001G215300--Sobic002G190100 Sobic001G215300--Sobic008G130700 Sobic001G236800 Sobic001G236800 Sobic001G215300--Sobic001G236800 Sobic001G188600 Sobic001G188600 Sobic001G215300--Sobic001G188600 Sobic001G215300--Sobic007G090415 Sobic006G114300 Sobic006G114300 Sobic001G215300--Sobic006G114300
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.