Gene annotation
Transcriptome id Sobic.006G025700.1
Synonym
Functional annotation -
UniProt A0A1B6PJM6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
2 Sobic.009G059100 Cupin domain containing protein, expressed -
3 Sobic.002G020100 chalcone synthase, putative, expressed -
4 Sobic.004G253800 - -
5 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G435600 - -
8 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
9 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
10 Sobic.008G130700 expressed protein -
11 Sobic.005G056201 - -
12 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.009G098100 T-complex protein, putative, expressed -
15 Sobic.005G200600 dirigent, putative, expressed -
16 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
17 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
18 Sobic.006G114300 pentatricopeptide, putative, expressed -
19 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
20 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P


Gene co-expression network
sample Sobic006G025700 Sobic006G025700 Sobic003G157500 Sobic003G157500 Sobic006G025700--Sobic003G157500 Sobic009G059100 Sobic009G059100 Sobic006G025700--Sobic009G059100 Sobic002G020100 Sobic002G020100 Sobic006G025700--Sobic002G020100 Sobic004G253800 Sobic004G253800 Sobic006G025700--Sobic004G253800 Sobic001G003600 Sobic001G003600 Sobic006G025700--Sobic001G003600 Sobic002G190100 Sobic002G190100 Sobic006G025700--Sobic002G190100 Sobic001G435600 Sobic001G435600 Sobic006G025700--Sobic001G435600 Sobic004G109000 Sobic004G109000 Sobic006G025700--Sobic004G109000 Sobic003G096100 Sobic003G096100 Sobic006G025700--Sobic003G096100 Sobic003G157500--Sobic006G025700 Sobic003G157500--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic003G157500--Sobic005G020200 Sobic003G157500--Sobic004G253800 Sobic003G157500--Sobic002G020100 Sobic005G056201 Sobic005G056201 Sobic003G157500--Sobic005G056201 Sobic003G157500--Sobic001G003600 Sobic005G200600 Sobic005G200600 Sobic003G157500--Sobic005G200600 Sobic003G157500--Sobic004G109000 Sobic006G172700 Sobic006G172700 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic009G059100--Sobic006G025700 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic009G059100--Sobic003G096100 Sobic009G059100--Sobic001G435600 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic002G020100--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G329500 Sobic002G329500 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600 Sobic004G253800--Sobic005G200600 Sobic004G253800--Sobic003G157500 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic004G253800--Sobic006G025700 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic004G253800--Sobic006G114300 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic005G110436 Sobic005G110436 Sobic001G003600--Sobic005G110436 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic002G190100--Sobic004G253800 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic002G415300 Sobic002G415300 Sobic001G435600--Sobic002G415300 Sobic002G415400 Sobic002G415400 Sobic001G435600--Sobic002G415400 Sobic004G060700 Sobic004G060700 Sobic001G435600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic001G435600--Sobic002G416950 Sobic001G435600--Sobic009G115050 Sobic001G435600--Sobic002G329500 Sobic008G163200 Sobic008G163200 Sobic001G435600--Sobic008G163200 Sobic001G435600--Sobic001G003600 Sobic007G170800 Sobic007G170800 Sobic001G435600--Sobic007G170800 Sobic004G109000--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic004G109000--Sobic007G211100 Sobic004G109000--Sobic006G114300 Sobic003G383500 Sobic003G383500 Sobic004G109000--Sobic003G383500 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic004G109000--Sobic006G025700 Sobic007G013400 Sobic007G013400 Sobic004G109000--Sobic007G013400 Sobic001G215300 Sobic001G215300 Sobic004G109000--Sobic001G215300 Sobic003G096100--Sobic001G003600 Sobic003G096100--Sobic006G172700 Sobic001G366500 Sobic001G366500 Sobic003G096100--Sobic001G366500 Sobic003G096100--Sobic009G059100 Sobic003G096100--Sobic001G435600 Sobic003G096100--Sobic003G058600 Sobic003G074600 Sobic003G074600 Sobic003G096100--Sobic003G074600 Sobic003G096100--Sobic002G020100 Sobic003G096100--Sobic005G110436
Octagon: transcription factors


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