Gene annotation
Transcriptome id Sobic.009G059100.1
Synonym GLP3A, ATGER3, GLP3, Sb09g004970, GER3, GLP3B
Functional annotation Cupin domain containing protein, expressed
UniProt C5Z116
Pfam PF07883
Panther DB PTHR31238 PTHR31238:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20630 : germin 3
RAP-DB (Rice) LOC_Os08g35760.1 : Cupin domain containing protein, expressed
MaizeGDB (Corn) Zm00025a042896
Brachypodium PNT68238
Barley HORVU2Hr1G012460.3 , HORVU2Hr1G012460.2 , HORVU7Hr1G036720.1 , HORVU7Hr1G036720.3 , HORVU7Hr1G036720.2
Wheat -
Populus -


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cDNA sequences
Sobic.009G059100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
3 Sobic.006G025700 - -
4 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.002G020100 chalcone synthase, putative, expressed -
6 Sobic.005G200600 dirigent, putative, expressed -
7 Sobic.005G056201 - -
8 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
9 Sobic.001G435600 - -
10 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
12 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
13 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
14 Sobic.004G253800 - -
15 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
16 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
17 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
18 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
19 Sobic.009G098100 T-complex protein, putative, expressed -
20 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic009G059100 Sobic009G059100 Sobic006G172700 Sobic006G172700 Sobic009G059100--Sobic006G172700 Sobic003G157500 Sobic003G157500 Sobic009G059100--Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic009G059100--Sobic006G025700 Sobic001G003600 Sobic001G003600 Sobic009G059100--Sobic001G003600 Sobic002G020100 Sobic002G020100 Sobic009G059100--Sobic002G020100 Sobic005G200600 Sobic005G200600 Sobic009G059100--Sobic005G200600 Sobic005G056201 Sobic005G056201 Sobic009G059100--Sobic005G056201 Sobic003G096100 Sobic003G096100 Sobic009G059100--Sobic003G096100 Sobic001G435600 Sobic001G435600 Sobic009G059100--Sobic001G435600 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic006G172700--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic006G172700--Sobic009G115050 Sobic004G060700 Sobic004G060700 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic003G157500--Sobic006G025700 Sobic003G157500--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic003G157500--Sobic005G020200 Sobic004G253800 Sobic004G253800 Sobic003G157500--Sobic004G253800 Sobic003G157500--Sobic002G020100 Sobic003G157500--Sobic005G056201 Sobic003G157500--Sobic001G003600 Sobic003G157500--Sobic005G200600 Sobic004G109000 Sobic004G109000 Sobic003G157500--Sobic004G109000 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic006G025700--Sobic001G003600 Sobic002G190100 Sobic002G190100 Sobic006G025700--Sobic002G190100 Sobic006G025700--Sobic001G435600 Sobic006G025700--Sobic004G109000 Sobic006G025700--Sobic003G096100 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic002G329500 Sobic002G329500 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic005G110436 Sobic005G110436 Sobic001G003600--Sobic005G110436 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic002G020100--Sobic004G076000 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600 Sobic006G238100 Sobic006G238100 Sobic005G200600--Sobic006G238100 Sobic002G141100 Sobic002G141100 Sobic005G200600--Sobic002G141100 Sobic005G200600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic005G200600--Sobic002G416950 Sobic005G200600--Sobic009G059100 Sobic004G249400 Sobic004G249400 Sobic005G200600--Sobic004G249400 Sobic007G009600 Sobic007G009600 Sobic005G200600--Sobic007G009600 Sobic001G541300 Sobic001G541300 Sobic005G200600--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic005G200600--Sobic001G379300 Sobic005G056201--Sobic006G172700 Sobic005G056201--Sobic002G020100 Sobic005G056201--Sobic001G003600 Sobic005G056201--Sobic009G059100 Sobic005G056201--Sobic004G076000 Sobic005G056201--Sobic003G157500 Sobic005G056201--Sobic003G096100 Sobic005G056201--Sobic005G020200 Sobic005G056201--Sobic006G025700 Sobic003G096100--Sobic001G003600 Sobic003G096100--Sobic006G172700 Sobic001G366500 Sobic001G366500 Sobic003G096100--Sobic001G366500 Sobic003G096100--Sobic009G059100 Sobic003G096100--Sobic001G435600 Sobic003G096100--Sobic003G058600 Sobic003G074600 Sobic003G074600 Sobic003G096100--Sobic003G074600 Sobic003G096100--Sobic002G020100 Sobic003G096100--Sobic005G110436 Sobic002G415300 Sobic002G415300 Sobic001G435600--Sobic002G415300 Sobic002G415400 Sobic002G415400 Sobic001G435600--Sobic002G415400 Sobic001G435600--Sobic004G060700 Sobic001G435600--Sobic002G416950 Sobic001G435600--Sobic009G115050 Sobic001G435600--Sobic002G329500 Sobic008G163200 Sobic008G163200 Sobic001G435600--Sobic008G163200 Sobic001G435600--Sobic001G003600 Sobic007G170800 Sobic007G170800 Sobic001G435600--Sobic007G170800
Octagon: transcription factors


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