Gene annotation
Transcriptome id Sobic.004G001200.2
Synonym Sb04g000310
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A1Z5RL05
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF182
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT1G75900 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g01140.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a006821 , Zm00025a009129 , Zm00025a018625
Brachypodium KQJ92731 , KQK11987
Barley HORVU6Hr1G001510.1 , HORVU2Hr1G107400.4 , HORVU2Hr1G107400.2 , HORVU2Hr1G107400.3
Wheat TraesCS2A02G477400 , TraesCS2D02G476600 , TraesCS2B02G500500 , TraesCS4A02G316400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G238000 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
3 Sobic.009G059100 Cupin domain containing protein, expressed -
4 Sobic.004G291500 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
5 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
6 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
8 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
9 Sobic.002G020100 chalcone synthase, putative, expressed -
10 Sobic.005G056201 - -
11 Sobic.001G427000 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
12 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
13 Sobic.009G010900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed -
14 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
15 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
16 Sobic.010G124200 expressed protein -
17 Sobic.008G084200 fasciclin domain containing protein, expressed -
18 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
19 Sobic.009G098100 T-complex protein, putative, expressed -
20 Sobic.006G025700 - -


Gene co-expression network
sample Sobic004G001200 Sobic004G001200 Sobic006G238000 Sobic006G238000 Sobic004G001200--Sobic006G238000 Sobic006G001400 Sobic006G001400 Sobic004G001200--Sobic006G001400 Sobic009G059100 Sobic009G059100 Sobic004G001200--Sobic009G059100 Sobic004G291500 Sobic004G291500 Sobic004G001200--Sobic004G291500 Sobic005G020200 Sobic005G020200 Sobic004G001200--Sobic005G020200 Sobic006G172700 Sobic006G172700 Sobic004G001200--Sobic006G172700 Sobic005G196500 Sobic005G196500 Sobic004G001200--Sobic005G196500 Sobic004G300800 Sobic004G300800 Sobic004G001200--Sobic004G300800 Sobic002G020100 Sobic002G020100 Sobic004G001200--Sobic002G020100 Sobic008G084200 Sobic008G084200 Sobic006G238000--Sobic008G084200 Sobic006G238000--Sobic004G001200 Sobic007G127600 Sobic007G127600 Sobic006G238000--Sobic007G127600 Sobic001G076500 Sobic001G076500 Sobic006G238000--Sobic001G076500 Sobic006G238000--Sobic009G059100 Sobic001G427000 Sobic001G427000 Sobic006G238000--Sobic001G427000 Sobic006G238000--Sobic006G172700 Sobic002G280500 Sobic002G280500 Sobic006G238000--Sobic002G280500 Sobic001G366500 Sobic001G366500 Sobic006G238000--Sobic001G366500 Sobic006G001400--Sobic005G196500 Sobic006G001400--Sobic004G001200 Sobic006G001400--Sobic009G059100 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G233600 Sobic006G233600 Sobic006G001400--Sobic006G233600 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic009G059100--Sobic006G025700 Sobic001G003600 Sobic001G003600 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic005G200600 Sobic005G200600 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic003G096100 Sobic003G096100 Sobic009G059100--Sobic003G096100 Sobic001G435600 Sobic001G435600 Sobic009G059100--Sobic001G435600 Sobic004G291500--Sobic004G001200 Sobic004G291500--Sobic005G196500 Sobic004G291500--Sobic006G001400 Sobic004G291500--Sobic006G233600 Sobic004G291500--Sobic002G280500 Sobic004G291500--Sobic009G059100 Sobic004G291500--Sobic006G172700 Sobic004G291500--Sobic006G238000 Sobic001G478100 Sobic001G478100 Sobic004G291500--Sobic001G478100 Sobic005G020200--Sobic003G157500 Sobic005G020200--Sobic009G059100 Sobic005G020200--Sobic005G200600 Sobic004G253800 Sobic004G253800 Sobic005G020200--Sobic004G253800 Sobic005G020200--Sobic006G001400 Sobic005G020200--Sobic005G056201 Sobic005G141000 Sobic005G141000 Sobic005G020200--Sobic005G141000 Sobic005G020200--Sobic006G025700 Sobic008G130700 Sobic008G130700 Sobic005G020200--Sobic008G130700 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic006G172700--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic006G172700--Sobic009G115050 Sobic004G060700 Sobic004G060700 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G209900 Sobic005G209900 Sobic005G196500--Sobic005G209900 Sobic010G107200 Sobic010G107200 Sobic005G196500--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic005G196500--Sobic005G227050 Sobic007G142300 Sobic007G142300 Sobic005G196500--Sobic007G142300 Sobic005G196500--Sobic004G001200 Sobic003G333000 Sobic003G333000 Sobic005G196500--Sobic003G333000 Sobic005G196500--Sobic004G291500 Sobic004G300800--Sobic009G059100 Sobic009G215600 Sobic009G215600 Sobic004G300800--Sobic009G215600 Sobic004G300800--Sobic001G366500 Sobic004G249400 Sobic004G249400 Sobic004G300800--Sobic004G249400 Sobic001G453200 Sobic001G453200 Sobic004G300800--Sobic001G453200 Sobic004G300800--Sobic006G172700 Sobic004G300800--Sobic005G200600 Sobic004G300800--Sobic002G020100 Sobic003G120500 Sobic003G120500 Sobic004G300800--Sobic003G120500 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic002G020100--Sobic004G076000 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G329500 Sobic002G329500 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600
Octagon: transcription factors


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