Gene annotation
Transcriptome id Sobic.009G010900.1
Synonym Sb09g001130
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
NAD dependent epimerase/dehydratase family protein, putative, expressed
UniProt C5YYG4
Pfam PF13460
Panther DB PTHR14194 PTHR14194:SF78
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G37660 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os05g01970.3 : NAD dependent epimerase/dehydratase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a038270
Brachypodium KQK08043
Barley HORVU1Hr1G004430.8 , HORVU1Hr1G004430.9 , HORVU1Hr1G004430.6 , HORVU1Hr1G004430.4 , HORVU1Hr1G004430.5 , HORVU1Hr1G004430.3 , HORVU1Hr1G004430.7 , HORVU1Hr1G004430.2 , HORVU1Hr1G004430.10 , HORVU1Hr1G004430.11 , HORVU1Hr1G004430.12
Wheat TraesCS1B02G037100 , TraesCS1D02G030600 , TraesCS1A02G030100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P
2 Sobic.004G168500 peroxiredoxin, putative, expressed K03386: PRDX2_4, peroxiredoxin 2/4
3 Sobic.007G222600 fasciclin domain containing protein, expressed -
4 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
5 Sobic.003G202300 S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
6 Sobic.008G084200 fasciclin domain containing protein, expressed -
7 Sobic.010G233800 ribosomal protein L24, putative, expressed K02895: RP-L24, MRPL24, large subunit ribosomal protein L24
8 Sobic.001G094200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@calcium homeostasis regulator CHoR1, putative, expressed -
9 Sobic.006G238000 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G406400 PPR repeat domain containing protein, putative, expressed -
11 Sobic.001G427000 ribosomal protein L4, putative, expressed K02926: RP-L4, MRPL4, large subunit ribosomal protein L4
12 Sobic.001G076500 ribosomal protein, putative, expressed K02996: RP-S9, MRPS9, small subunit ribosomal protein S9
13 Sobic.008G058500 cytochrome P450, putative, expressed -
14 Sobic.010G072900 peroxiredoxin, putative, expressed K03564: BCP, PRXQ, thioredoxin-dependent peroxiredoxin
15 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
16 Sobic.002G285450 - -
17 Sobic.007G127600 transferase family protein, putative, expressed -
18 Sobic.004G353900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase/ transition metal ion binding protein, putative, expressed -
19 Sobic.004G300800 aldehyde dehydrogenase, putative, expressed K00128: aldehyde dehydrogenase (NAD+)
20 Sobic.006G268200 protochlorophyllide reductase A, chloroplast precursor, putative, expressed K00218: protochlorophyllide reductase


Gene co-expression network
sample Sobic009G010900 Sobic009G010900 Sobic008G030000 Sobic008G030000 Sobic009G010900--Sobic008G030000 Sobic004G168500 Sobic004G168500 Sobic009G010900--Sobic004G168500 Sobic007G222600 Sobic007G222600 Sobic009G010900--Sobic007G222600 Sobic004G001200 Sobic004G001200 Sobic009G010900--Sobic004G001200 Sobic003G202300 Sobic003G202300 Sobic009G010900--Sobic003G202300 Sobic008G084200 Sobic008G084200 Sobic009G010900--Sobic008G084200 Sobic010G233800 Sobic010G233800 Sobic009G010900--Sobic010G233800 Sobic001G094200 Sobic001G094200 Sobic009G010900--Sobic001G094200 Sobic006G238000 Sobic006G238000 Sobic009G010900--Sobic006G238000 Sobic003G295800 Sobic003G295800 Sobic008G030000--Sobic003G295800 Sobic009G098100 Sobic009G098100 Sobic008G030000--Sobic009G098100 Sobic009G001500 Sobic009G001500 Sobic008G030000--Sobic009G001500 Sobic003G383600 Sobic003G383600 Sobic008G030000--Sobic003G383600 Sobic001G453300 Sobic001G453300 Sobic008G030000--Sobic001G453300 Sobic001G357200 Sobic001G357200 Sobic008G030000--Sobic001G357200 Sobic007G185100 Sobic007G185100 Sobic008G030000--Sobic007G185100 Sobic001G383900 Sobic001G383900 Sobic008G030000--Sobic001G383900 Sobic007G013400 Sobic007G013400 Sobic008G030000--Sobic007G013400 Sobic004G168500--Sobic001G453300 Sobic001G427000 Sobic001G427000 Sobic004G168500--Sobic001G427000 Sobic003G246400 Sobic003G246400 Sobic004G168500--Sobic003G246400 Sobic001G076500 Sobic001G076500 Sobic004G168500--Sobic001G076500 Sobic001G027600 Sobic001G027600 Sobic004G168500--Sobic001G027600 Sobic004G168500--Sobic010G233800 Sobic003G256200 Sobic003G256200 Sobic004G168500--Sobic003G256200 Sobic004G168500--Sobic001G383900 Sobic004G168500--Sobic008G030000 Sobic007G222600--Sobic009G010900 Sobic001G127700 Sobic001G127700 Sobic007G222600--Sobic001G127700 Sobic006G238100 Sobic006G238100 Sobic007G222600--Sobic006G238100 Sobic007G170800 Sobic007G170800 Sobic007G222600--Sobic007G170800 Sobic003G114200 Sobic003G114200 Sobic007G222600--Sobic003G114200 Sobic007G127600 Sobic007G127600 Sobic007G222600--Sobic007G127600 Sobic004G060700 Sobic004G060700 Sobic007G222600--Sobic004G060700 Sobic001G541300 Sobic001G541300 Sobic007G222600--Sobic001G541300 Sobic006G172700 Sobic006G172700 Sobic007G222600--Sobic006G172700 Sobic004G001200--Sobic006G238000 Sobic006G001400 Sobic006G001400 Sobic004G001200--Sobic006G001400 Sobic009G059100 Sobic009G059100 Sobic004G001200--Sobic009G059100 Sobic004G291500 Sobic004G291500 Sobic004G001200--Sobic004G291500 Sobic005G020200 Sobic005G020200 Sobic004G001200--Sobic005G020200 Sobic004G001200--Sobic006G172700 Sobic005G196500 Sobic005G196500 Sobic004G001200--Sobic005G196500 Sobic004G300800 Sobic004G300800 Sobic004G001200--Sobic004G300800 Sobic002G020100 Sobic002G020100 Sobic004G001200--Sobic002G020100 Sobic004G191200 Sobic004G191200 Sobic003G202300--Sobic004G191200 Sobic003G202300--Sobic008G030000 Sobic003G202300--Sobic001G453300 Sobic003G202300--Sobic004G168500 Sobic009G212000 Sobic009G212000 Sobic003G202300--Sobic009G212000 Sobic003G202300--Sobic001G027600 Sobic003G202300--Sobic001G094200 Sobic004G317900 Sobic004G317900 Sobic003G202300--Sobic004G317900 Sobic003G202300--Sobic007G185100 Sobic008G084200--Sobic006G238000 Sobic008G084200--Sobic001G076500 Sobic008G084200--Sobic007G127600 Sobic004G231800 Sobic004G231800 Sobic008G084200--Sobic004G231800 Sobic002G020000 Sobic002G020000 Sobic008G084200--Sobic002G020000 Sobic008G084200--Sobic010G233800 Sobic008G084200--Sobic001G427000 Sobic001G366500 Sobic001G366500 Sobic008G084200--Sobic001G366500 Sobic002G415400 Sobic002G415400 Sobic008G084200--Sobic002G415400 Sobic010G233800--Sobic001G076500 Sobic010G233800--Sobic001G453300 Sobic010G233800--Sobic004G317900 Sobic010G233800--Sobic001G427000 Sobic003G393800 Sobic003G393800 Sobic010G233800--Sobic003G393800 Sobic010G233800--Sobic003G246400 Sobic010G233800--Sobic001G027600 Sobic010G233800--Sobic007G185100 Sobic004G116100 Sobic004G116100 Sobic010G233800--Sobic004G116100 Sobic001G094200--Sobic003G256200 Sobic001G094200--Sobic003G246400 Sobic001G094200--Sobic010G233800 Sobic001G094200--Sobic004G191200 Sobic001G094200--Sobic001G453300 Sobic001G191000 Sobic001G191000 Sobic001G094200--Sobic001G191000 Sobic001G094200--Sobic001G427000 Sobic001G094200--Sobic001G076500 Sobic001G411300 Sobic001G411300 Sobic001G094200--Sobic001G411300 Sobic006G238000--Sobic008G084200 Sobic006G238000--Sobic004G001200 Sobic006G238000--Sobic007G127600 Sobic006G238000--Sobic001G076500 Sobic006G238000--Sobic009G059100 Sobic006G238000--Sobic001G427000 Sobic006G238000--Sobic006G172700 Sobic002G280500 Sobic002G280500 Sobic006G238000--Sobic002G280500 Sobic006G238000--Sobic001G366500
Octagon: transcription factors


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