Gene annotation
Transcriptome id Sobic.002G285450.1
Synonym -
Functional annotation -
UniProt A0A1W0W635
Pfam PF02519
Panther DB PTHR31175
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009733; response to auxin


Orthologs (automatic annotation)
TAIR AT1G29500 : SAUR-like auxin-responsive protein family
RAP-DB (Rice) LOC_Os09g37480.1 : OsSAUR53 - Auxin-responsive SAUR gene family member, expressed
MaizeGDB (Corn) Zm00025a047988
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G019900 gibberellin receptor GID1L2, putative, expressed -
2 Sobic.002G406400 PPR repeat domain containing protein, putative, expressed -
3 Sobic.009G157000 glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
4 Sobic.002G283800 AIG2-like family domain containing protein, expressed -
5 Sobic.004G132400 lectin-like receptor kinase, putative, expressed -
6 Sobic.001G516800 signal recognition particle 43 kDa protein, chloroplast precursor, putative, expressed K12271: SRP43, signal recognition particle 43 kDa protein
7 Sobic.009G010900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed -
8 Sobic.001G030200 transcription termination factor nusG family protein, expressed -
9 Sobic.007G139000 ZF-HD protein dimerisation region containing protein, expressed -
10 Sobic.010G208000 ribosomal protein L35, putative, expressed K02916: RP-L35, MRPL35, large subunit ribosomal protein L35
11 Sobic.001G147400 Ferredoxin(PubMedID : 26186930)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed K02639: ferredoxin
12 Sobic.006G111500 expressed protein -
13 Sobic.010G072900 peroxiredoxin, putative, expressed K03564: BCP, PRXQ, thioredoxin-dependent peroxiredoxin
14 Sobic.003G132300 MYB family transcription factor, putative, expressed -
15 Sobic.007G222600 fasciclin domain containing protein, expressed -
16 Sobic.001G397900 "Controlling grain color, orthologous to the maize p1"(PubMedID : 20585750)@"induction of chs, chi, dfr, f3'h 3-deoxyanthocyanidins biosynthesis responsive genes "(PubMedID : 25647576)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.003G202300 S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
18 Sobic.006G268200 protochlorophyllide reductase A, chloroplast precursor, putative, expressed K00218: protochlorophyllide reductase
19 Sobic.010G207700 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -
20 Sobic.003G111600 expressed protein -


Gene co-expression network
sample Sobic002G285450 Sobic002G285450 Sobic002G019900 Sobic002G019900 Sobic002G285450--Sobic002G019900 Sobic002G406400 Sobic002G406400 Sobic002G285450--Sobic002G406400 Sobic009G157000 Sobic009G157000 Sobic002G285450--Sobic009G157000 Sobic002G283800 Sobic002G283800 Sobic002G285450--Sobic002G283800 Sobic004G132400 Sobic004G132400 Sobic002G285450--Sobic004G132400 Sobic001G516800 Sobic001G516800 Sobic002G285450--Sobic001G516800 Sobic009G010900 Sobic009G010900 Sobic002G285450--Sobic009G010900 Sobic001G030200 Sobic001G030200 Sobic002G285450--Sobic001G030200 Sobic007G139000 Sobic007G139000 Sobic002G285450--Sobic007G139000 Sobic002G019900--Sobic001G030200 Sobic002G019900--Sobic002G285450 Sobic010G208000 Sobic010G208000 Sobic002G019900--Sobic010G208000 Sobic002G019900--Sobic001G516800 Sobic002G019900--Sobic007G139000 Sobic003G111600 Sobic003G111600 Sobic002G019900--Sobic003G111600 Sobic004G016700 Sobic004G016700 Sobic002G019900--Sobic004G016700 Sobic001G460700 Sobic001G460700 Sobic002G019900--Sobic001G460700 Sobic002G019900--Sobic002G406400 Sobic002G406400--Sobic002G285450 Sobic003G202300 Sobic003G202300 Sobic002G406400--Sobic003G202300 Sobic001G094200 Sobic001G094200 Sobic002G406400--Sobic001G094200 Sobic010G072900 Sobic010G072900 Sobic002G406400--Sobic010G072900 Sobic002G406400--Sobic009G010900 Sobic002G406400--Sobic001G516800 Sobic004G191200 Sobic004G191200 Sobic002G406400--Sobic004G191200 Sobic002G406400--Sobic001G030200 Sobic002G406400--Sobic002G019900 Sobic006G111500 Sobic006G111500 Sobic009G157000--Sobic006G111500 Sobic009G157000--Sobic002G285450 Sobic004G123600 Sobic004G123600 Sobic009G157000--Sobic004G123600 Sobic009G157000--Sobic007G139000 Sobic009G157000--Sobic002G283800 Sobic003G191800 Sobic003G191800 Sobic009G157000--Sobic003G191800 Sobic004G310700 Sobic004G310700 Sobic009G157000--Sobic004G310700 Sobic009G157000--Sobic002G406400 Sobic009G157000--Sobic004G132400 Sobic010G136900 Sobic010G136900 Sobic002G283800--Sobic010G136900 Sobic002G283800--Sobic001G516800 Sobic002G101800 Sobic002G101800 Sobic002G283800--Sobic002G101800 Sobic002G283800--Sobic002G285450 Sobic002G283800--Sobic007G139000 Sobic002G283800--Sobic004G132400 Sobic002G283800--Sobic003G191800 Sobic001G147400 Sobic001G147400 Sobic002G283800--Sobic001G147400 Sobic002G283800--Sobic003G111600 Sobic004G132400--Sobic001G147400 Sobic003G132300 Sobic003G132300 Sobic004G132400--Sobic003G132300 Sobic003G211500 Sobic003G211500 Sobic004G132400--Sobic003G211500 Sobic004G132400--Sobic002G285450 Sobic004G132400--Sobic002G283800 Sobic004G132400--Sobic001G516800 Sobic004G204500 Sobic004G204500 Sobic004G132400--Sobic004G204500 Sobic008G147101 Sobic008G147101 Sobic004G132400--Sobic008G147101 Sobic006G229300 Sobic006G229300 Sobic004G132400--Sobic006G229300 Sobic001G516800--Sobic010G208000 Sobic001G516800--Sobic002G283800 Sobic001G516800--Sobic001G030200 Sobic001G516800--Sobic001G147400 Sobic004G034500 Sobic004G034500 Sobic001G516800--Sobic004G034500 Sobic002G088200 Sobic002G088200 Sobic001G516800--Sobic002G088200 Sobic001G516800--Sobic002G019900 Sobic001G543500 Sobic001G543500 Sobic001G516800--Sobic001G543500 Sobic009G179800 Sobic009G179800 Sobic001G516800--Sobic009G179800 Sobic008G030000 Sobic008G030000 Sobic009G010900--Sobic008G030000 Sobic004G168500 Sobic004G168500 Sobic009G010900--Sobic004G168500 Sobic007G222600 Sobic007G222600 Sobic009G010900--Sobic007G222600 Sobic004G001200 Sobic004G001200 Sobic009G010900--Sobic004G001200 Sobic009G010900--Sobic003G202300 Sobic008G084200 Sobic008G084200 Sobic009G010900--Sobic008G084200 Sobic010G233800 Sobic010G233800 Sobic009G010900--Sobic010G233800 Sobic009G010900--Sobic001G094200 Sobic006G238000 Sobic006G238000 Sobic009G010900--Sobic006G238000 Sobic001G030200--Sobic010G208000 Sobic001G030200--Sobic002G019900 Sobic004G066300 Sobic004G066300 Sobic001G030200--Sobic004G066300 Sobic001G030200--Sobic001G516800 Sobic004G353900 Sobic004G353900 Sobic001G030200--Sobic004G353900 Sobic008G131200 Sobic008G131200 Sobic001G030200--Sobic008G131200 Sobic001G030200--Sobic004G016700 Sobic001G030200--Sobic004G034500 Sobic004G072000 Sobic004G072000 Sobic001G030200--Sobic004G072000 Sobic007G139000--Sobic003G191800 Sobic005G102200 Sobic005G102200 Sobic007G139000--Sobic005G102200 Sobic001G137200 Sobic001G137200 Sobic007G139000--Sobic001G137200 Sobic010G152700 Sobic010G152700 Sobic007G139000--Sobic010G152700 Sobic007G139000--Sobic002G101800 Sobic007G139000--Sobic003G111600 Sobic001G483700 Sobic001G483700 Sobic007G139000--Sobic001G483700 Sobic002G285525 Sobic002G285525 Sobic007G139000--Sobic002G285525 Sobic010G014900 Sobic010G014900 Sobic007G139000--Sobic010G014900
Octagon: transcription factors


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