Gene annotation
Transcriptome id Sobic.004G300800.1
Synonym ALDH3F1, Sb04g033420
Functional annotation aldehyde dehydrogenase, putative, expressed
UniProt C5XS38
Pfam PF00171
Panther DB PTHR11699 PTHR11699:SF195
NCBI CDD -
KEGG Orthology K00128; aldehyde dehydrogenase (NAD+)
Gene Ontology GO:0016491; oxidoreductase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT4G36250 : aldehyde dehydrogenase 3F1
RAP-DB (Rice) LOC_Os02g43194.1 : aldehyde dehydrogenase, putative, expressed
MaizeGDB (Corn) Zm00025a020938 , Zm00025a056618
Brachypodium KQJ83836 , KQJ83837 , KQK00542
Barley HORVU2Hr1G092530.9 , HORVU6Hr1G061220.12 , HORVU2Hr1G092530.16 , HORVU2Hr1G092530.14 , HORVU2Hr1G092530.13 , HORVU2Hr1G092530.10 , HORVU6Hr1G061220.9 , HORVU6Hr1G061220.1 , HORVU6Hr1G061220.5 , HORVU6Hr1G061220.4 , HORVU6Hr1G061220.7 , HORVU6Hr1G061220.6 , HORVU2Hr1G092530.7 , HORVU2Hr1G092530.6 , HORVU2Hr1G092530.5 , HORVU2Hr1G092530.4 , HORVU2Hr1G092530.3 , HORVU2Hr1G092530.2 , HORVU2Hr1G092530.1 , HORVU6Hr1G061220.10 , HORVU6Hr1G061220.13 , HORVU2Hr1G092530.8 , HORVU2Hr1G092530.15 , HORVU2Hr1G092530.12 , HORVU2Hr1G092530.11 , HORVU2Hr1G092540.1
Wheat TraesCS6D02G222000 , TraesCS2B02G406900 , TraesCS2A02G388900 , TraesCS6B02G284900 , TraesCS2D02G386700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G059100 Cupin domain containing protein, expressed -
2 Sobic.009G215600 expressed protein -
3 Sobic.001G366500 cytochrome P450, putative, expressed -
4 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
5 Sobic.001G453200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.005G200600 dirigent, putative, expressed -
8 Sobic.002G020100 chalcone synthase, putative, expressed -
9 Sobic.003G120500 transmembrane protein 136, putative, expressed -
10 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
12 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
13 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.006G060500 expressed protein -
15 Sobic.007G127600 transferase family protein, putative, expressed -
16 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
17 Sobic.006G238000 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
20 Sobic.006G025700 - -


Gene co-expression network
sample Sobic004G300800 Sobic004G300800 Sobic009G059100 Sobic009G059100 Sobic004G300800--Sobic009G059100 Sobic009G215600 Sobic009G215600 Sobic004G300800--Sobic009G215600 Sobic001G366500 Sobic001G366500 Sobic004G300800--Sobic001G366500 Sobic004G249400 Sobic004G249400 Sobic004G300800--Sobic004G249400 Sobic001G453200 Sobic001G453200 Sobic004G300800--Sobic001G453200 Sobic006G172700 Sobic006G172700 Sobic004G300800--Sobic006G172700 Sobic005G200600 Sobic005G200600 Sobic004G300800--Sobic005G200600 Sobic002G020100 Sobic002G020100 Sobic004G300800--Sobic002G020100 Sobic003G120500 Sobic003G120500 Sobic004G300800--Sobic003G120500 Sobic009G059100--Sobic006G172700 Sobic003G157500 Sobic003G157500 Sobic009G059100--Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic009G059100--Sobic006G025700 Sobic001G003600 Sobic001G003600 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic009G059100--Sobic005G200600 Sobic005G056201 Sobic005G056201 Sobic009G059100--Sobic005G056201 Sobic003G096100 Sobic003G096100 Sobic009G059100--Sobic003G096100 Sobic001G435600 Sobic001G435600 Sobic009G059100--Sobic001G435600 Sobic002G141100 Sobic002G141100 Sobic009G215600--Sobic002G141100 Sobic008G163200 Sobic008G163200 Sobic009G215600--Sobic008G163200 Sobic004G038300 Sobic004G038300 Sobic009G215600--Sobic004G038300 Sobic002G209800 Sobic002G209800 Sobic009G215600--Sobic002G209800 Sobic002G416950 Sobic002G416950 Sobic009G215600--Sobic002G416950 Sobic009G215600--Sobic004G300800 Sobic004G060700 Sobic004G060700 Sobic009G215600--Sobic004G060700 Sobic001G379300 Sobic001G379300 Sobic009G215600--Sobic001G379300 Sobic002G415300 Sobic002G415300 Sobic009G215600--Sobic002G415300 Sobic001G366500--Sobic003G096100 Sobic001G366500--Sobic001G003600 Sobic007G127600 Sobic007G127600 Sobic001G366500--Sobic007G127600 Sobic007G170800 Sobic007G170800 Sobic001G366500--Sobic007G170800 Sobic001G366500--Sobic001G435600 Sobic001G366500--Sobic006G172700 Sobic001G366500--Sobic004G060700 Sobic003G058600 Sobic003G058600 Sobic001G366500--Sobic003G058600 Sobic009G115050 Sobic009G115050 Sobic001G366500--Sobic009G115050 Sobic004G249400--Sobic001G453200 Sobic001G541300 Sobic001G541300 Sobic004G249400--Sobic001G541300 Sobic004G249400--Sobic002G141100 Sobic004G249400--Sobic005G200600 Sobic002G207900 Sobic002G207900 Sobic004G249400--Sobic002G207900 Sobic004G249400--Sobic007G127600 Sobic006G238100 Sobic006G238100 Sobic004G249400--Sobic006G238100 Sobic004G249400--Sobic003G120500 Sobic003G114200 Sobic003G114200 Sobic004G249400--Sobic003G114200 Sobic001G453200--Sobic004G249400 Sobic001G453200--Sobic002G207900 Sobic001G453200--Sobic003G120500 Sobic001G453200--Sobic002G209800 Sobic001G453200--Sobic003G114200 Sobic001G453200--Sobic007G127600 Sobic001G453200--Sobic001G541300 Sobic001G453200--Sobic006G238100 Sobic001G453200--Sobic005G200600 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic006G172700--Sobic004G076000 Sobic006G172700--Sobic009G115050 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic005G200600--Sobic006G238100 Sobic005G200600--Sobic002G141100 Sobic005G200600--Sobic004G060700 Sobic005G200600--Sobic002G416950 Sobic005G200600--Sobic009G059100 Sobic005G200600--Sobic004G249400 Sobic007G009600 Sobic007G009600 Sobic005G200600--Sobic007G009600 Sobic005G200600--Sobic001G541300 Sobic005G200600--Sobic001G379300 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic002G020100--Sobic004G076000 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G329500 Sobic002G329500 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600 Sobic004G036100 Sobic004G036100 Sobic003G120500--Sobic004G036100 Sobic003G120500--Sobic001G453200 Sobic003G069200 Sobic003G069200 Sobic003G120500--Sobic003G069200 Sobic003G120500--Sobic004G249400 Sobic004G044200 Sobic004G044200 Sobic003G120500--Sobic004G044200 Sobic003G120500--Sobic002G207900 Sobic003G120500--Sobic002G209800 Sobic005G218201 Sobic005G218201 Sobic003G120500--Sobic005G218201 Sobic010G255600 Sobic010G255600 Sobic003G120500--Sobic010G255600
Octagon: transcription factors


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