Gene annotation
Transcriptome id Sobic.002G141100.1
Synonym Sb02g012990
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt C5X6Q5
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF269
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT2G42990 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os09g04624.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a018155
Brachypodium KQJ86943 , KQJ86942
Barley HORVU5Hr1G049650.1 , HORVU5Hr1G049650.2 , HORVU0Hr1G012390.1 , HORVU0Hr1G012390.3 , HORVU0Hr1G012390.2
Wheat TraesCS5D02G169100 , TraesCS5D02G169100 , TraesCS5B02G161700 , TraesCS5A02G164200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.005G200600 dirigent, putative, expressed -
3 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
4 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
5 Sobic.002G416950 - -
6 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.007G009600 expressed protein -
8 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
9 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
12 Sobic.002G415300 - -
13 Sobic.001G435600 - -
14 Sobic.009G215600 expressed protein -
15 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
16 Sobic.007G127600 transferase family protein, putative, expressed -
17 Sobic.002G351000 fasciclin domain containing protein, expressed -
18 Sobic.002G415400 - -
19 Sobic.008G123600 nucleoside diphosphate kinase, putative, expressed K00940: ndk, nucleoside-diphosphate kinase
20 Sobic.009G119400 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@glycosyl hydrolases family 17, putative, expressed -


Gene co-expression network
sample Sobic002G141100 Sobic002G141100 Sobic001G541300 Sobic001G541300 Sobic002G141100--Sobic001G541300 Sobic005G200600 Sobic005G200600 Sobic002G141100--Sobic005G200600 Sobic007G170800 Sobic007G170800 Sobic002G141100--Sobic007G170800 Sobic004G060700 Sobic004G060700 Sobic002G141100--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic002G141100--Sobic002G416950 Sobic006G238100 Sobic006G238100 Sobic002G141100--Sobic006G238100 Sobic007G009600 Sobic007G009600 Sobic002G141100--Sobic007G009600 Sobic003G114200 Sobic003G114200 Sobic002G141100--Sobic003G114200 Sobic001G379300 Sobic001G379300 Sobic002G141100--Sobic001G379300 Sobic001G541300--Sobic002G141100 Sobic001G541300--Sobic003G114200 Sobic001G541300--Sobic007G170800 Sobic001G541300--Sobic002G416950 Sobic001G541300--Sobic004G060700 Sobic001G541300--Sobic006G238100 Sobic004G249400 Sobic004G249400 Sobic001G541300--Sobic004G249400 Sobic001G541300--Sobic001G379300 Sobic001G541300--Sobic007G009600 Sobic005G200600--Sobic006G238100 Sobic005G200600--Sobic002G141100 Sobic005G200600--Sobic004G060700 Sobic005G200600--Sobic002G416950 Sobic009G059100 Sobic009G059100 Sobic005G200600--Sobic009G059100 Sobic005G200600--Sobic004G249400 Sobic005G200600--Sobic007G009600 Sobic005G200600--Sobic001G541300 Sobic005G200600--Sobic001G379300 Sobic007G170800--Sobic004G060700 Sobic007G170800--Sobic003G114200 Sobic007G170800--Sobic007G009600 Sobic007G170800--Sobic002G416950 Sobic008G163200 Sobic008G163200 Sobic007G170800--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic007G170800--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic007G170800--Sobic002G415300 Sobic007G170800--Sobic001G541300 Sobic007G170800--Sobic001G379300 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic004G060700--Sobic007G009600 Sobic004G060700--Sobic008G163200 Sobic002G415400 Sobic002G415400 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic004G060700--Sobic006G238100 Sobic004G060700--Sobic001G379300 Sobic002G416950--Sobic004G060700 Sobic002G416950--Sobic001G379300 Sobic002G416950--Sobic002G415300 Sobic002G416950--Sobic006G238100 Sobic002G416950--Sobic007G009600 Sobic002G416950--Sobic001G435600 Sobic002G416950--Sobic008G163200 Sobic002G416950--Sobic007G170800 Sobic002G416950--Sobic002G415400 Sobic006G238100--Sobic001G379300 Sobic006G238100--Sobic002G416950 Sobic006G238100--Sobic004G060700 Sobic001G255300 Sobic001G255300 Sobic006G238100--Sobic001G255300 Sobic006G238100--Sobic005G200600 Sobic006G238100--Sobic007G009600 Sobic006G238100--Sobic002G415300 Sobic006G238100--Sobic008G163200 Sobic006G238100--Sobic002G415400 Sobic007G009600--Sobic004G060700 Sobic007G009600--Sobic002G416950 Sobic007G009600--Sobic007G170800 Sobic007G009600--Sobic001G379300 Sobic007G009600--Sobic006G238100 Sobic007G009600--Sobic008G163200 Sobic007G009600--Sobic002G415300 Sobic007G009600--Sobic001G435600 Sobic007G009600--Sobic002G415400 Sobic003G114200--Sobic007G170800 Sobic007G127600 Sobic007G127600 Sobic003G114200--Sobic007G127600 Sobic003G114200--Sobic001G541300 Sobic003G114200--Sobic002G141100 Sobic003G114200--Sobic004G060700 Sobic003G114200--Sobic002G416950 Sobic003G114200--Sobic008G163200 Sobic003G114200--Sobic007G009600 Sobic007G185100 Sobic007G185100 Sobic003G114200--Sobic007G185100 Sobic001G379300--Sobic006G238100 Sobic001G379300--Sobic002G416950 Sobic001G379300--Sobic001G255300 Sobic004G328900 Sobic004G328900 Sobic001G379300--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic001G379300--Sobic003G317800 Sobic001G379300--Sobic004G060700 Sobic001G379300--Sobic007G009600 Sobic001G379300--Sobic008G163200 Sobic007G069500 Sobic007G069500 Sobic001G379300--Sobic007G069500
Octagon: transcription factors


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