Gene annotation
Transcriptome id Sobic.008G163200.2,Sobic.008G163200.7,Sobic.008G163200.5,Sobic.008G163200.4,Sobic.008G163200.6,Sobic.008G163200.3,Sobic.008G163200.1
Synonym SCPL19, Sb08g020950, SNG2
Functional annotation OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed
UniProt A0A1B6PE27 , A0A1Z5R719 , A0A1Z5R726 , A0A1B6PE25 , A0A1Z5R7Z1 , A0A1B6PE17 , A0A1Z5R868
Pfam PF00450
Panther DB PTHR11802 PTHR11802:SF100
NCBI CDD KOG1282; Serine carboxypeptidases (lysosomal cathepsin A)
KEGG Orthology K16296; serine carboxypeptidase-like clade I
Gene Ontology GO:0006508; proteolysis GO:0004185serine-type carboxypeptidase activity


Orthologs (automatic annotation)
TAIR AT5G09640 : serine carboxypeptidase-like 16,serine carboxypeptidase-like 19
RAP-DB (Rice) LOC_Os02g46260.2,LOC_Os02g46260.1 : OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU7Hr1G025800.1 , HORVU7Hr1G025800.4 , HORVU7Hr1G025800.5 , HORVU7Hr1G025800.7 , HORVU7Hr1G025800.2 , HORVU7Hr1G025800.3 , HORVU7Hr1G025800.8 , HORVU7Hr1G025800.9 , HORVU7Hr1G025800.6 , HORVU7Hr1G025800.16 , HORVU7Hr1G025800.17 , HORVU7Hr1G025800.14 , HORVU7Hr1G025800.15 , HORVU7Hr1G025800.12 , HORVU7Hr1G025800.13 , HORVU7Hr1G025800.10 , HORVU7Hr1G025800.11 , HORVU7Hr1G025800.18 , HORVU7Hr1G025800.19 , HORVU7Hr1G025800.25 , HORVU7Hr1G025800.24 , HORVU7Hr1G025800.23 , HORVU7Hr1G025800.22 , HORVU7Hr1G025800.21 , HORVU7Hr1G025800.20
Wheat TraesCS7D02G120800 , TraesCS7B02G021500 , TraesCS7B02G021500 , TraesCS2A02G412300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G415300 - -
2 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
3 Sobic.002G415400 - -
4 Sobic.002G416950 - -
5 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
6 Sobic.003G068300 transferase family protein, putative, expressed -
7 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
9 Sobic.001G435600 - -
10 Sobic.007G009600 expressed protein -
11 Sobic.004G328900 expressed protein -
12 Sobic.003G317800 lysM domain containing protein, putative -
13 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.009G206000 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
15 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
16 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.001G541300 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
18 Sobic.003G114200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycerol-3-phosphate acyltransferase, putative, expressed K13508: glycerol-3-phosphate acyltransferase
19 Sobic.009G115050 - -
20 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase


Gene co-expression network
sample Sobic008G163200 Sobic008G163200 Sobic002G415300 Sobic002G415300 Sobic008G163200--Sobic002G415300 Sobic004G060700 Sobic004G060700 Sobic008G163200--Sobic004G060700 Sobic002G415400 Sobic002G415400 Sobic008G163200--Sobic002G415400 Sobic002G416950 Sobic002G416950 Sobic008G163200--Sobic002G416950 Sobic007G170800 Sobic007G170800 Sobic008G163200--Sobic007G170800 Sobic003G068300 Sobic003G068300 Sobic008G163200--Sobic003G068300 Sobic001G379300 Sobic001G379300 Sobic008G163200--Sobic001G379300 Sobic001G255300 Sobic001G255300 Sobic008G163200--Sobic001G255300 Sobic001G435600 Sobic001G435600 Sobic008G163200--Sobic001G435600 Sobic002G415300--Sobic002G415400 Sobic002G415300--Sobic004G060700 Sobic002G415300--Sobic008G163200 Sobic002G415300--Sobic001G435600 Sobic002G415300--Sobic003G068300 Sobic002G415300--Sobic002G416950 Sobic009G115050 Sobic009G115050 Sobic002G415300--Sobic009G115050 Sobic002G329500 Sobic002G329500 Sobic002G415300--Sobic002G329500 Sobic002G415300--Sobic007G170800 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic007G009600 Sobic007G009600 Sobic004G060700--Sobic007G009600 Sobic004G060700--Sobic008G163200 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic006G238100 Sobic006G238100 Sobic004G060700--Sobic006G238100 Sobic004G060700--Sobic001G379300 Sobic002G415400--Sobic002G415300 Sobic002G415400--Sobic001G435600 Sobic002G415400--Sobic004G060700 Sobic002G415400--Sobic003G068300 Sobic002G415400--Sobic008G163200 Sobic002G415400--Sobic009G115050 Sobic002G415400--Sobic002G416950 Sobic002G415400--Sobic002G329500 Sobic002G415400--Sobic006G238100 Sobic002G416950--Sobic004G060700 Sobic002G416950--Sobic001G379300 Sobic002G416950--Sobic002G415300 Sobic002G416950--Sobic006G238100 Sobic002G416950--Sobic007G009600 Sobic002G416950--Sobic001G435600 Sobic002G416950--Sobic008G163200 Sobic002G416950--Sobic007G170800 Sobic002G416950--Sobic002G415400 Sobic007G170800--Sobic004G060700 Sobic003G114200 Sobic003G114200 Sobic007G170800--Sobic003G114200 Sobic007G170800--Sobic007G009600 Sobic007G170800--Sobic002G416950 Sobic007G170800--Sobic008G163200 Sobic007G170800--Sobic001G435600 Sobic007G170800--Sobic002G415300 Sobic001G541300 Sobic001G541300 Sobic007G170800--Sobic001G541300 Sobic007G170800--Sobic001G379300 Sobic003G068300--Sobic002G415300 Sobic003G068300--Sobic002G415400 Sobic003G068300--Sobic008G163200 Sobic003G068300--Sobic001G255300 Sobic009G206000 Sobic009G206000 Sobic003G068300--Sobic009G206000 Sobic003G068300--Sobic004G060700 Sobic003G068300--Sobic006G238100 Sobic003G068300--Sobic002G416950 Sobic004G328900 Sobic004G328900 Sobic003G068300--Sobic004G328900 Sobic001G379300--Sobic006G238100 Sobic001G379300--Sobic002G416950 Sobic001G379300--Sobic001G255300 Sobic001G379300--Sobic004G328900 Sobic003G317800 Sobic003G317800 Sobic001G379300--Sobic003G317800 Sobic001G379300--Sobic004G060700 Sobic001G379300--Sobic007G009600 Sobic001G379300--Sobic008G163200 Sobic007G069500 Sobic007G069500 Sobic001G379300--Sobic007G069500 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic001G255300--Sobic008G163200 Sobic001G255300--Sobic002G416950 Sobic003G007800 Sobic003G007800 Sobic001G255300--Sobic003G007800 Sobic008G189500 Sobic008G189500 Sobic001G255300--Sobic008G189500 Sobic001G255300--Sobic003G068300 Sobic001G435600--Sobic002G415300 Sobic001G435600--Sobic002G415400 Sobic001G435600--Sobic004G060700 Sobic001G435600--Sobic002G416950 Sobic001G435600--Sobic009G115050 Sobic001G435600--Sobic002G329500 Sobic001G435600--Sobic008G163200 Sobic001G003600 Sobic001G003600 Sobic001G435600--Sobic001G003600 Sobic001G435600--Sobic007G170800
Octagon: transcription factors


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