Gene annotation
Transcriptome id Sobic.003G068300.2,Sobic.003G068300.1
Synonym HCT, Sb03g005810
Functional annotation transferase family protein, putative, expressed
UniProt C5XPC5 , C5XPD4
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF16
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G48930 : HXXXD-type acyl-transferase family protein,hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
RAP-DB (Rice) LOC_Os08g43040.1,LOC_Os08g43040.2 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a023429 , Zm00025a023433 , Zm00025a023432
Brachypodium -
Barley -
Wheat TraesCS6D02G025800 , TraesCS6A02G022100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G415300 - -
2 Sobic.002G415400 - -
3 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
4 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
5 Sobic.009G206000 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
6 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
7 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G416950 - -
9 Sobic.004G328900 expressed protein -
10 Sobic.001G435600 - -
11 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
13 Sobic.003G317800 lysM domain containing protein, putative -
14 Sobic.004G019300 terpene synthase, putative, expressed K15086: (3S)-linalool synthase
15 Sobic.004G038300 cycloartenol synthase, putative, expressed -
16 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
17 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
18 Sobic.009G115050 - -
19 Sobic.005G212400 Leucine Rich Repeat family protein, expressed -
20 Sobic.002G141100 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G068300 Sobic003G068300 Sobic002G415300 Sobic002G415300 Sobic003G068300--Sobic002G415300 Sobic002G415400 Sobic002G415400 Sobic003G068300--Sobic002G415400 Sobic008G163200 Sobic008G163200 Sobic003G068300--Sobic008G163200 Sobic001G255300 Sobic001G255300 Sobic003G068300--Sobic001G255300 Sobic009G206000 Sobic009G206000 Sobic003G068300--Sobic009G206000 Sobic004G060700 Sobic004G060700 Sobic003G068300--Sobic004G060700 Sobic006G238100 Sobic006G238100 Sobic003G068300--Sobic006G238100 Sobic002G416950 Sobic002G416950 Sobic003G068300--Sobic002G416950 Sobic004G328900 Sobic004G328900 Sobic003G068300--Sobic004G328900 Sobic002G415300--Sobic002G415400 Sobic002G415300--Sobic004G060700 Sobic002G415300--Sobic008G163200 Sobic001G435600 Sobic001G435600 Sobic002G415300--Sobic001G435600 Sobic002G415300--Sobic003G068300 Sobic002G415300--Sobic002G416950 Sobic009G115050 Sobic009G115050 Sobic002G415300--Sobic009G115050 Sobic002G329500 Sobic002G329500 Sobic002G415300--Sobic002G329500 Sobic007G170800 Sobic007G170800 Sobic002G415300--Sobic007G170800 Sobic002G415400--Sobic002G415300 Sobic002G415400--Sobic001G435600 Sobic002G415400--Sobic004G060700 Sobic002G415400--Sobic003G068300 Sobic002G415400--Sobic008G163200 Sobic002G415400--Sobic009G115050 Sobic002G415400--Sobic002G416950 Sobic002G415400--Sobic002G329500 Sobic002G415400--Sobic006G238100 Sobic008G163200--Sobic002G415300 Sobic008G163200--Sobic004G060700 Sobic008G163200--Sobic002G415400 Sobic008G163200--Sobic002G416950 Sobic008G163200--Sobic007G170800 Sobic008G163200--Sobic003G068300 Sobic001G379300 Sobic001G379300 Sobic008G163200--Sobic001G379300 Sobic008G163200--Sobic001G255300 Sobic008G163200--Sobic001G435600 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic001G255300--Sobic006G238100 Sobic003G317800 Sobic003G317800 Sobic001G255300--Sobic003G317800 Sobic001G255300--Sobic008G163200 Sobic001G255300--Sobic002G416950 Sobic003G007800 Sobic003G007800 Sobic001G255300--Sobic003G007800 Sobic008G189500 Sobic008G189500 Sobic001G255300--Sobic008G189500 Sobic001G255300--Sobic003G068300 Sobic009G206000--Sobic003G068300 Sobic009G206000--Sobic006G238100 Sobic009G206000--Sobic002G415300 Sobic009G206000--Sobic008G163200 Sobic009G206000--Sobic002G415400 Sobic009G206000--Sobic004G060700 Sobic009G206000--Sobic002G416950 Sobic009G206000--Sobic001G255300 Sobic009G206000--Sobic001G379300 Sobic004G060700--Sobic002G416950 Sobic004G060700--Sobic002G415300 Sobic004G060700--Sobic007G170800 Sobic007G009600 Sobic007G009600 Sobic004G060700--Sobic007G009600 Sobic004G060700--Sobic008G163200 Sobic004G060700--Sobic002G415400 Sobic004G060700--Sobic001G435600 Sobic004G060700--Sobic006G238100 Sobic004G060700--Sobic001G379300 Sobic006G238100--Sobic001G379300 Sobic006G238100--Sobic002G416950 Sobic006G238100--Sobic004G060700 Sobic006G238100--Sobic001G255300 Sobic005G200600 Sobic005G200600 Sobic006G238100--Sobic005G200600 Sobic006G238100--Sobic007G009600 Sobic006G238100--Sobic002G415300 Sobic006G238100--Sobic008G163200 Sobic006G238100--Sobic002G415400 Sobic002G416950--Sobic004G060700 Sobic002G416950--Sobic001G379300 Sobic002G416950--Sobic002G415300 Sobic002G416950--Sobic006G238100 Sobic002G416950--Sobic007G009600 Sobic002G416950--Sobic001G435600 Sobic002G416950--Sobic008G163200 Sobic002G416950--Sobic007G170800 Sobic002G416950--Sobic002G415400 Sobic004G328900--Sobic003G317800 Sobic004G328900--Sobic001G255300 Sobic004G328900--Sobic001G379300 Sobic004G328900--Sobic008G163200 Sobic004G328900--Sobic002G416950 Sobic002G128600 Sobic002G128600 Sobic004G328900--Sobic002G128600 Sobic004G328900--Sobic006G238100 Sobic004G328900--Sobic003G007800 Sobic004G328900--Sobic003G068300
Octagon: transcription factors


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