Gene annotation
Transcriptome id Sobic.004G038300.1
Synonym Sb04g003300, CAS1
Functional annotation cycloartenol synthase, putative, expressed
UniProt C5XUK6
Pfam PF00432 PF13243
Panther DB PTHR11764 PTHR11764:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0003824; catalytic activity


Orthologs (automatic annotation)
TAIR AT2G07050 : cycloartenol synthase 1
RAP-DB (Rice) LOC_Os11g35710.1 : cycloartenol synthase, putative, expressed
MaizeGDB (Corn) Zm00025a018949
Brachypodium PNT65840 , KQJ95492 , PNT65839
Barley HORVU6Hr1G019940.3 , HORVU6Hr1G019940.2 , HORVU6Hr1G019940.1 , HORVU6Hr1G019940.4 , HORVU6Hr1G020020.1 , HORVU6Hr1G020020.3 , HORVU6Hr1G020020.4 , HORVU6Hr1G020020.5 , HORVU6Hr1G020020.6
Wheat TraesCS4A02G496400 , TraesCS6B02G139500 , TraesCS7D02G173700 , TraesCS6D02G099900 , TraesCS7A02G001700 , TraesCS6A02G111400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G317800 lysM domain containing protein, putative -
2 Sobic.001G255300 Protein tyrosine decarboxylase 4 (OS)(PubMedID : 27208977)@decarboxylase, putative, expressed K01592: tyrosine decarboxylase
3 Sobic.004G328900 expressed protein -
4 Sobic.002G128600 lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
5 Sobic.001G379300 peroxidase precursor, putative, expressed K00430: peroxidase
6 Sobic.005G190800 Cyclopropane-fatty-acyl-phospholipid synthase, putative, expressed K05928: tocopherol O-methyltransferase
7 Sobic.006G238100 LTPL126 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.002G209800 ZOS9-11 - C2H2 zinc finger protein, expressed -
9 Sobic.003G007800 phosphorylase domain containing protein, putative, expressed -
10 Sobic.005G218600 NBS-LRR disease resistance protein, putative, expressed -
11 Sobic.002G416950 - -
12 Sobic.009G215600 expressed protein -
13 Sobic.003G068300 transferase family protein, putative, expressed -
14 Sobic.008G163200 OsSCP9 - Putative Serine Carboxypeptidase homologue, expressed K16296: serine carboxypeptidase-like clade I
15 Sobic.008G189500 similar to Secretory acid phosphatase - Pfam Calcineurin-like phosphoesterase(PubMedID : 24655390)@similar to Secretory acid phosphatase - Pfam Calcineurin -like phosphoesterase(PubMedID : 24655390)@Ser/Thr protein phosphatase family protein, putative, expressed -
16 Sobic.007G069500 expressed protein -
17 Sobic.004G249400 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
18 Sobic.005G029400 strictosidine synthase, putative, expressed -
19 Sobic.009G206000 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
20 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase


Gene co-expression network
sample Sobic004G038300 Sobic004G038300 Sobic003G317800 Sobic003G317800 Sobic004G038300--Sobic003G317800 Sobic001G255300 Sobic001G255300 Sobic004G038300--Sobic001G255300 Sobic004G328900 Sobic004G328900 Sobic004G038300--Sobic004G328900 Sobic002G128600 Sobic002G128600 Sobic004G038300--Sobic002G128600 Sobic001G379300 Sobic001G379300 Sobic004G038300--Sobic001G379300 Sobic005G190800 Sobic005G190800 Sobic004G038300--Sobic005G190800 Sobic006G238100 Sobic006G238100 Sobic004G038300--Sobic006G238100 Sobic002G209800 Sobic002G209800 Sobic004G038300--Sobic002G209800 Sobic003G007800 Sobic003G007800 Sobic004G038300--Sobic003G007800 Sobic003G317800--Sobic004G328900 Sobic003G317800--Sobic002G128600 Sobic003G317800--Sobic001G379300 Sobic003G317800--Sobic001G255300 Sobic008G163200 Sobic008G163200 Sobic003G317800--Sobic008G163200 Sobic003G317800--Sobic004G038300 Sobic002G416950 Sobic002G416950 Sobic003G317800--Sobic002G416950 Sobic003G317800--Sobic003G007800 Sobic007G069500 Sobic007G069500 Sobic003G317800--Sobic007G069500 Sobic001G255300--Sobic001G379300 Sobic001G255300--Sobic004G328900 Sobic001G255300--Sobic006G238100 Sobic001G255300--Sobic003G317800 Sobic001G255300--Sobic008G163200 Sobic001G255300--Sobic002G416950 Sobic001G255300--Sobic003G007800 Sobic008G189500 Sobic008G189500 Sobic001G255300--Sobic008G189500 Sobic003G068300 Sobic003G068300 Sobic001G255300--Sobic003G068300 Sobic004G328900--Sobic003G317800 Sobic004G328900--Sobic001G255300 Sobic004G328900--Sobic001G379300 Sobic004G328900--Sobic008G163200 Sobic004G328900--Sobic002G416950 Sobic004G328900--Sobic002G128600 Sobic004G328900--Sobic006G238100 Sobic004G328900--Sobic003G007800 Sobic004G328900--Sobic003G068300 Sobic006G227000 Sobic006G227000 Sobic002G128600--Sobic006G227000 Sobic002G128600--Sobic003G317800 Sobic002G128600--Sobic007G069500 Sobic002G128600--Sobic005G190800 Sobic001G249500 Sobic001G249500 Sobic002G128600--Sobic001G249500 Sobic002G128600--Sobic004G328900 Sobic002G128600--Sobic001G379300 Sobic002G128600--Sobic001G255300 Sobic002G128600--Sobic003G007800 Sobic001G379300--Sobic006G238100 Sobic001G379300--Sobic002G416950 Sobic001G379300--Sobic001G255300 Sobic001G379300--Sobic004G328900 Sobic001G379300--Sobic003G317800 Sobic004G060700 Sobic004G060700 Sobic001G379300--Sobic004G060700 Sobic007G009600 Sobic007G009600 Sobic001G379300--Sobic007G009600 Sobic001G379300--Sobic008G163200 Sobic001G379300--Sobic007G069500 Sobic006G175700 Sobic006G175700 Sobic005G190800--Sobic006G175700 Sobic005G190800--Sobic002G128600 Sobic005G190800--Sobic003G007800 Sobic005G190800--Sobic006G227000 Sobic005G190800--Sobic001G249500 Sobic005G190800--Sobic003G317800 Sobic005G190800--Sobic004G038300 Sobic005G190800--Sobic004G328900 Sobic005G190800--Sobic007G069500 Sobic006G238100--Sobic001G379300 Sobic006G238100--Sobic002G416950 Sobic006G238100--Sobic004G060700 Sobic006G238100--Sobic001G255300 Sobic005G200600 Sobic005G200600 Sobic006G238100--Sobic005G200600 Sobic006G238100--Sobic007G009600 Sobic002G415300 Sobic002G415300 Sobic006G238100--Sobic002G415300 Sobic006G238100--Sobic008G163200 Sobic002G415400 Sobic002G415400 Sobic006G238100--Sobic002G415400 Sobic002G209800--Sobic004G038300 Sobic002G209800--Sobic006G238100 Sobic004G249400 Sobic004G249400 Sobic002G209800--Sobic004G249400 Sobic009G215600 Sobic009G215600 Sobic002G209800--Sobic009G215600 Sobic002G209800--Sobic001G255300 Sobic005G218600 Sobic005G218600 Sobic002G209800--Sobic005G218600 Sobic002G209800--Sobic005G200600 Sobic002G209800--Sobic001G379300 Sobic002G141100 Sobic002G141100 Sobic002G209800--Sobic002G141100 Sobic003G007800--Sobic008G189500 Sobic003G007800--Sobic001G255300 Sobic003G007800--Sobic005G190800 Sobic003G007800--Sobic006G175700 Sobic003G007800--Sobic004G328900 Sobic003G007800--Sobic003G317800 Sobic003G007800--Sobic002G128600 Sobic005G029400 Sobic005G029400 Sobic003G007800--Sobic005G029400 Sobic003G007800--Sobic004G038300
Octagon: transcription factors


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