Gene annotation
Transcriptome id Sobic.003G096100.1
Synonym Sb03g008060
Functional annotation auxin-induced protein 5NG4, putative, expressed
UniProt C5XEA2
Pfam PF00892
Panther DB PTHR31218 PTHR31218:SF62
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane GO:0016020membrane


Orthologs (automatic annotation)
TAIR AT1G75500 : Walls Are Thin 1
RAP-DB (Rice) LOC_Os01g02870.1 : auxin-induced protein 5NG4, putative, expressed
MaizeGDB (Corn) Zm00025a023719
Brachypodium KQK02427
Barley HORVU3Hr1G002710.7 , HORVU3Hr1G002710.6 , HORVU3Hr1G002710.5 , HORVU3Hr1G002710.4 , HORVU3Hr1G002710.3 , HORVU3Hr1G002710.2 , HORVU3Hr1G002710.1 , HORVU3Hr1G002710.9 , HORVU3Hr1G002710.8
Wheat TraesCS3B02G026700 , TraesCS3D02G027300 , TraesCS3A02G019600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.001G366500 cytochrome P450, putative, expressed -
4 Sobic.009G059100 Cupin domain containing protein, expressed -
5 Sobic.001G435600 - -
6 Sobic.003G058600 cytochrome P450, putative, expressed -
7 Sobic.003G074600 Lecithin: cholesterol acyltransferase family protein (At)(PubMedID : 27208977)@lecithin:cholesterol acyltransferase, putative, expressed K06129: lysophospholipase III
8 Sobic.002G020100 chalcone synthase, putative, expressed -
9 Sobic.005G110436 - -
10 Sobic.009G115050 - -
11 Sobic.004G105800 peroxidase precursor, putative, expressed K00430: peroxidase
12 Sobic.001G394250 - -
13 Sobic.001G127700 possible lysine decarboxylase domain containing protein, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
14 Sobic.004G076000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein peroxiredoxin-5 (Os)(PubMedID : 27208977)@peroxiredoxin, putative, expressed -
15 Sobic.007G170800 Fatty acyl CoA reductase 1 FAR1 (At)(PubMedID : 27208977)@male sterility protein 2, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
16 Sobic.002G020000 wax synthase, putative, expressed -
17 Sobic.006G025700 - -
18 Sobic.002G329500 Beta amylase BAM (Zm)(PubMedID : 27208977)@beta-amylase, putative, expressed K01177: beta-amylase
19 Sobic.004G060700 male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
20 Sobic.005G056201 - -


Gene co-expression network
sample Sobic003G096100 Sobic003G096100 Sobic001G003600 Sobic001G003600 Sobic003G096100--Sobic001G003600 Sobic006G172700 Sobic006G172700 Sobic003G096100--Sobic006G172700 Sobic001G366500 Sobic001G366500 Sobic003G096100--Sobic001G366500 Sobic009G059100 Sobic009G059100 Sobic003G096100--Sobic009G059100 Sobic001G435600 Sobic001G435600 Sobic003G096100--Sobic001G435600 Sobic003G058600 Sobic003G058600 Sobic003G096100--Sobic003G058600 Sobic003G074600 Sobic003G074600 Sobic003G096100--Sobic003G074600 Sobic002G020100 Sobic002G020100 Sobic003G096100--Sobic002G020100 Sobic005G110436 Sobic005G110436 Sobic003G096100--Sobic005G110436 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic009G115050 Sobic009G115050 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic004G076000 Sobic004G076000 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic002G329500 Sobic002G329500 Sobic001G003600--Sobic002G329500 Sobic001G003600--Sobic003G058600 Sobic001G003600--Sobic005G110436 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic005G056201 Sobic005G056201 Sobic006G172700--Sobic005G056201 Sobic006G172700--Sobic004G076000 Sobic006G172700--Sobic009G115050 Sobic004G060700 Sobic004G060700 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic001G366500--Sobic003G096100 Sobic001G366500--Sobic001G003600 Sobic007G127600 Sobic007G127600 Sobic001G366500--Sobic007G127600 Sobic007G170800 Sobic007G170800 Sobic001G366500--Sobic007G170800 Sobic001G366500--Sobic001G435600 Sobic001G366500--Sobic006G172700 Sobic001G366500--Sobic004G060700 Sobic001G366500--Sobic003G058600 Sobic001G366500--Sobic009G115050 Sobic009G059100--Sobic006G172700 Sobic003G157500 Sobic003G157500 Sobic009G059100--Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic009G059100--Sobic006G025700 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic005G200600 Sobic005G200600 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic009G059100--Sobic003G096100 Sobic009G059100--Sobic001G435600 Sobic002G415300 Sobic002G415300 Sobic001G435600--Sobic002G415300 Sobic002G415400 Sobic002G415400 Sobic001G435600--Sobic002G415400 Sobic001G435600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic001G435600--Sobic002G416950 Sobic001G435600--Sobic009G115050 Sobic001G435600--Sobic002G329500 Sobic008G163200 Sobic008G163200 Sobic001G435600--Sobic008G163200 Sobic001G435600--Sobic001G003600 Sobic001G435600--Sobic007G170800 Sobic003G058600--Sobic004G060700 Sobic003G058600--Sobic001G003600 Sobic003G058600--Sobic001G435600 Sobic003G058600--Sobic009G115050 Sobic007G009600 Sobic007G009600 Sobic003G058600--Sobic007G009600 Sobic003G058600--Sobic002G329500 Sobic003G058600--Sobic006G172700 Sobic003G058600--Sobic002G415400 Sobic003G058600--Sobic002G415300 Sobic003G074600--Sobic001G003600 Sobic003G074600--Sobic004G076000 Sobic003G074600--Sobic009G115050 Sobic003G074600--Sobic002G329500 Sobic003G074600--Sobic003G096100 Sobic003G074600--Sobic005G110436 Sobic003G074600--Sobic001G435600 Sobic003G074600--Sobic006G172700 Sobic003G074600--Sobic001G127700 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic002G020100--Sobic004G076000 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600 Sobic005G110436--Sobic009G115050 Sobic005G110436--Sobic001G003600 Sobic005G110436--Sobic004G076000 Sobic005G110436--Sobic002G329500 Sobic002G351000 Sobic002G351000 Sobic005G110436--Sobic002G351000 Sobic005G110436--Sobic001G127700 Sobic002G020000 Sobic002G020000 Sobic005G110436--Sobic002G020000 Sobic001G394250 Sobic001G394250 Sobic005G110436--Sobic001G394250 Sobic005G110436--Sobic006G172700
Octagon: transcription factors


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