Gene annotation
Transcriptome id Sobic.003G157500.3,Sobic.003G157500.2,Sobic.003G157500.1
Synonym Sb03g013730
Functional annotation oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
UniProt A0A1W0VXI4 , A0A1W0VXK0 , C5XJV2
Pfam PF03171
Panther DB PTHR10209 PTHR10209:SF163
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT1G52820 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os08g32170.1,LOC_Os08g32160.1 : oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G157500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G025700 - -
2 Sobic.009G059100 Cupin domain containing protein, expressed -
3 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.004G253800 - -
5 Sobic.002G020100 chalcone synthase, putative, expressed -
6 Sobic.005G056201 - -
7 Sobic.001G003600 GDSL-like lipase/acylhydrolase, putative, expressed -
8 Sobic.005G200600 dirigent, putative, expressed -
9 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
10 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.008G130700 expressed protein -
12 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
13 Sobic.003G096100 auxin-induced protein 5NG4, putative, expressed -
14 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
15 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.009G098100 T-complex protein, putative, expressed -
17 Sobic.001G435600 - -
18 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
19 Sobic.006G114300 pentatricopeptide, putative, expressed -
20 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18


Gene co-expression network
sample Sobic003G157500 Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic003G157500--Sobic006G025700 Sobic009G059100 Sobic009G059100 Sobic003G157500--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic003G157500--Sobic005G020200 Sobic004G253800 Sobic004G253800 Sobic003G157500--Sobic004G253800 Sobic002G020100 Sobic002G020100 Sobic003G157500--Sobic002G020100 Sobic005G056201 Sobic005G056201 Sobic003G157500--Sobic005G056201 Sobic001G003600 Sobic001G003600 Sobic003G157500--Sobic001G003600 Sobic005G200600 Sobic005G200600 Sobic003G157500--Sobic005G200600 Sobic004G109000 Sobic004G109000 Sobic003G157500--Sobic004G109000 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic006G025700--Sobic001G003600 Sobic002G190100 Sobic002G190100 Sobic006G025700--Sobic002G190100 Sobic001G435600 Sobic001G435600 Sobic006G025700--Sobic001G435600 Sobic006G025700--Sobic004G109000 Sobic003G096100 Sobic003G096100 Sobic006G025700--Sobic003G096100 Sobic006G172700 Sobic006G172700 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic009G059100--Sobic006G025700 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic009G059100--Sobic003G096100 Sobic009G059100--Sobic001G435600 Sobic005G020200--Sobic003G157500 Sobic005G020200--Sobic009G059100 Sobic005G020200--Sobic005G200600 Sobic005G020200--Sobic004G253800 Sobic006G001400 Sobic006G001400 Sobic005G020200--Sobic006G001400 Sobic005G020200--Sobic005G056201 Sobic005G141000 Sobic005G141000 Sobic005G020200--Sobic005G141000 Sobic005G020200--Sobic006G025700 Sobic008G130700 Sobic008G130700 Sobic005G020200--Sobic008G130700 Sobic004G253800--Sobic005G200600 Sobic004G253800--Sobic003G157500 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic004G253800--Sobic006G025700 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic004G253800--Sobic006G114300 Sobic002G020100--Sobic001G003600 Sobic002G020100--Sobic006G172700 Sobic002G020100--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic002G020100--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic002G020100--Sobic009G115050 Sobic002G020100--Sobic009G059100 Sobic002G329500 Sobic002G329500 Sobic002G020100--Sobic002G329500 Sobic009G098100 Sobic009G098100 Sobic002G020100--Sobic009G098100 Sobic002G020100--Sobic001G435600 Sobic005G056201--Sobic006G172700 Sobic005G056201--Sobic002G020100 Sobic005G056201--Sobic001G003600 Sobic005G056201--Sobic009G059100 Sobic005G056201--Sobic004G076000 Sobic005G056201--Sobic003G157500 Sobic005G056201--Sobic003G096100 Sobic005G056201--Sobic005G020200 Sobic005G056201--Sobic006G025700 Sobic001G003600--Sobic006G172700 Sobic001G003600--Sobic002G020100 Sobic001G003600--Sobic009G115050 Sobic001G003600--Sobic003G096100 Sobic001G003600--Sobic004G076000 Sobic001G003600--Sobic001G435600 Sobic001G003600--Sobic002G329500 Sobic003G058600 Sobic003G058600 Sobic001G003600--Sobic003G058600 Sobic005G110436 Sobic005G110436 Sobic001G003600--Sobic005G110436 Sobic006G238100 Sobic006G238100 Sobic005G200600--Sobic006G238100 Sobic002G141100 Sobic002G141100 Sobic005G200600--Sobic002G141100 Sobic004G060700 Sobic004G060700 Sobic005G200600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic005G200600--Sobic002G416950 Sobic005G200600--Sobic009G059100 Sobic004G249400 Sobic004G249400 Sobic005G200600--Sobic004G249400 Sobic007G009600 Sobic007G009600 Sobic005G200600--Sobic007G009600 Sobic001G541300 Sobic001G541300 Sobic005G200600--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic005G200600--Sobic001G379300 Sobic004G109000--Sobic001G188600 Sobic007G211100 Sobic007G211100 Sobic004G109000--Sobic007G211100 Sobic004G109000--Sobic006G114300 Sobic003G383500 Sobic003G383500 Sobic004G109000--Sobic003G383500 Sobic004G109000--Sobic009G059100 Sobic001G069500 Sobic001G069500 Sobic004G109000--Sobic001G069500 Sobic004G109000--Sobic006G025700 Sobic007G013400 Sobic007G013400 Sobic004G109000--Sobic007G013400 Sobic001G215300 Sobic001G215300 Sobic004G109000--Sobic001G215300
Octagon: transcription factors


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