Gene annotation
Transcriptome id Sobic.002G190100.1
Synonym Sb02g023760
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1W0W4X5
Pfam -
Panther DB PTHR37231 PTHR37231:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G50685 : -
RAP-DB (Rice) LOC_Os10g15300.1 : expressed protein
MaizeGDB (Corn) Zm00025a013845
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G190100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G025700 - -
2 Sobic.006G263800 HAD-superfamily hydrolase subfamily IA, variant 3, putative, expressed -
3 Sobic.008G130700 expressed protein -
4 Sobic.002G242600 expressed protein -
5 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18
6 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
7 Sobic.004G253800 - -
8 Sobic.009G059100 Cupin domain containing protein, expressed -
9 Sobic.001G120000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed -
10 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
11 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
12 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
13 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
14 Sobic.009G212000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@S1 RNA binding domain containing protein, expressed K02945: RP-S1, small subunit ribosomal protein S1
15 Sobic.003G383500 rhodanese-like, putative, expressed -
16 Sobic.002G064400 expressed protein -
17 Sobic.006G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@PPR repeat domain containing protein, putative, expressed -
18 Sobic.002G305700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@2Fe-2S iron-sulfur cluster binding domain containing protein, expressed -
19 Sobic.003G030900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G142400 RIO1 family protein, expressed -


Gene co-expression network
sample Sobic002G190100 Sobic002G190100 Sobic006G025700 Sobic006G025700 Sobic002G190100--Sobic006G025700 Sobic006G263800 Sobic006G263800 Sobic002G190100--Sobic006G263800 Sobic008G130700 Sobic008G130700 Sobic002G190100--Sobic008G130700 Sobic002G242600 Sobic002G242600 Sobic002G190100--Sobic002G242600 Sobic001G027600 Sobic001G027600 Sobic002G190100--Sobic001G027600 Sobic004G044000 Sobic004G044000 Sobic002G190100--Sobic004G044000 Sobic004G253800 Sobic004G253800 Sobic002G190100--Sobic004G253800 Sobic009G059100 Sobic009G059100 Sobic002G190100--Sobic009G059100 Sobic001G120000 Sobic001G120000 Sobic002G190100--Sobic001G120000 Sobic003G157500 Sobic003G157500 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic002G020100 Sobic002G020100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic001G003600 Sobic001G003600 Sobic006G025700--Sobic001G003600 Sobic006G025700--Sobic002G190100 Sobic001G435600 Sobic001G435600 Sobic006G025700--Sobic001G435600 Sobic004G109000 Sobic004G109000 Sobic006G025700--Sobic004G109000 Sobic003G096100 Sobic003G096100 Sobic006G025700--Sobic003G096100 Sobic007G116100 Sobic007G116100 Sobic006G263800--Sobic007G116100 Sobic006G263800--Sobic002G190100 Sobic002G140000 Sobic002G140000 Sobic006G263800--Sobic002G140000 Sobic001G281500 Sobic001G281500 Sobic006G263800--Sobic001G281500 Sobic005G022800 Sobic005G022800 Sobic006G263800--Sobic005G022800 Sobic001G099000 Sobic001G099000 Sobic006G263800--Sobic001G099000 Sobic010G027200 Sobic010G027200 Sobic006G263800--Sobic010G027200 Sobic006G237100 Sobic006G237100 Sobic006G263800--Sobic006G237100 Sobic006G263800--Sobic001G120000 Sobic007G090415 Sobic007G090415 Sobic008G130700--Sobic007G090415 Sobic008G130700--Sobic002G190100 Sobic008G130700--Sobic006G025700 Sobic008G130700--Sobic003G157500 Sobic003G176200 Sobic003G176200 Sobic008G130700--Sobic003G176200 Sobic005G020200 Sobic005G020200 Sobic008G130700--Sobic005G020200 Sobic005G141000 Sobic005G141000 Sobic008G130700--Sobic005G141000 Sobic008G008500 Sobic008G008500 Sobic008G130700--Sobic008G008500 Sobic001G215300 Sobic001G215300 Sobic008G130700--Sobic001G215300 Sobic002G242600--Sobic004G044000 Sobic007G013400 Sobic007G013400 Sobic002G242600--Sobic007G013400 Sobic003G030900 Sobic003G030900 Sobic002G242600--Sobic003G030900 Sobic003G383500 Sobic003G383500 Sobic002G242600--Sobic003G383500 Sobic009G001500 Sobic009G001500 Sobic002G242600--Sobic009G001500 Sobic002G242600--Sobic002G190100 Sobic002G242600--Sobic001G027600 Sobic001G475600 Sobic001G475600 Sobic002G242600--Sobic001G475600 Sobic006G248200 Sobic006G248200 Sobic002G242600--Sobic006G248200 Sobic001G453300 Sobic001G453300 Sobic001G027600--Sobic001G453300 Sobic001G427000 Sobic001G427000 Sobic001G027600--Sobic001G427000 Sobic001G076500 Sobic001G076500 Sobic001G027600--Sobic001G076500 Sobic001G027600--Sobic004G044000 Sobic004G317900 Sobic004G317900 Sobic001G027600--Sobic004G317900 Sobic001G383900 Sobic001G383900 Sobic001G027600--Sobic001G383900 Sobic003G295800 Sobic003G295800 Sobic001G027600--Sobic003G295800 Sobic004G191200 Sobic004G191200 Sobic001G027600--Sobic004G191200 Sobic006G280050 Sobic006G280050 Sobic001G027600--Sobic006G280050 Sobic004G044000--Sobic001G027600 Sobic004G044000--Sobic001G383900 Sobic004G044000--Sobic006G280050 Sobic004G044000--Sobic009G001500 Sobic004G044000--Sobic003G030900 Sobic004G044000--Sobic007G013400 Sobic004G044000--Sobic002G242600 Sobic004G044000--Sobic001G076500 Sobic007G034500 Sobic007G034500 Sobic004G044000--Sobic007G034500 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic004G253800--Sobic003G157500 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic004G253800--Sobic006G025700 Sobic004G253800--Sobic009G059100 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic004G253800--Sobic006G114300 Sobic006G172700 Sobic006G172700 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic009G059100--Sobic006G025700 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic009G059100--Sobic005G200600 Sobic005G056201 Sobic005G056201 Sobic009G059100--Sobic005G056201 Sobic009G059100--Sobic003G096100 Sobic009G059100--Sobic001G435600 Sobic001G120000--Sobic004G044000 Sobic001G120000--Sobic004G191200 Sobic002G190800 Sobic002G190800 Sobic001G120000--Sobic002G190800 Sobic001G120000--Sobic006G263800 Sobic001G120000--Sobic002G190100 Sobic004G017200 Sobic004G017200 Sobic001G120000--Sobic004G017200 Sobic002G305700 Sobic002G305700 Sobic001G120000--Sobic002G305700 Sobic001G120000--Sobic001G027600 Sobic001G255400 Sobic001G255400 Sobic001G120000--Sobic001G255400
Octagon: transcription factors


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