Gene annotation
Transcriptome id Sobic.004G253800.3,Sobic.004G253800.2
Synonym
Functional annotation -
UniProt A0A1Z5RP58
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a006215
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G200600 dirigent, putative, expressed -
2 Sobic.003G157500 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
3 Sobic.005G020200 myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
4 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
5 Sobic.006G025700 - -
6 Sobic.009G059100 Cupin domain containing protein, expressed -
7 Sobic.009G001500 peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
8 Sobic.001G357200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed K11294: NCL, nucleolin
9 Sobic.006G114300 pentatricopeptide, putative, expressed -
10 Sobic.001G069500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@GTP-binding protein, putative, expressed K06942: ribosome-binding ATPase
11 Sobic.008G030000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@elongation factor P, putative, expressed K02356: elongation factor P
12 Sobic.010G219500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, FKBP-type, putative, expressed K01802: peptidylprolyl isomerase
13 Sobic.009G098100 T-complex protein, putative, expressed -
14 Sobic.001G383900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
15 Sobic.004G044000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1303, putative, expressed -
16 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
17 Sobic.003G295800 ribosomal protein L13, putative, expressed K02871: RP-L13, MRPL13, large subunit ribosomal protein L13
18 Sobic.007G013400 ribosome recycling factor, putative, expressed K02838: frr, MRRF, ribosome recycling factor
19 Sobic.002G190100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G027600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ribosomal L18p/L5e family protein, putative, expressed K02881: RP-L18, MRPL18, large subunit ribosomal protein L18


Gene co-expression network
sample Sobic004G253800 Sobic004G253800 Sobic005G200600 Sobic005G200600 Sobic004G253800--Sobic005G200600 Sobic003G157500 Sobic003G157500 Sobic004G253800--Sobic003G157500 Sobic005G020200 Sobic005G020200 Sobic004G253800--Sobic005G020200 Sobic001G188600 Sobic001G188600 Sobic004G253800--Sobic001G188600 Sobic006G025700 Sobic006G025700 Sobic004G253800--Sobic006G025700 Sobic009G059100 Sobic009G059100 Sobic004G253800--Sobic009G059100 Sobic009G001500 Sobic009G001500 Sobic004G253800--Sobic009G001500 Sobic001G357200 Sobic001G357200 Sobic004G253800--Sobic001G357200 Sobic006G114300 Sobic006G114300 Sobic004G253800--Sobic006G114300 Sobic006G238100 Sobic006G238100 Sobic005G200600--Sobic006G238100 Sobic002G141100 Sobic002G141100 Sobic005G200600--Sobic002G141100 Sobic004G060700 Sobic004G060700 Sobic005G200600--Sobic004G060700 Sobic002G416950 Sobic002G416950 Sobic005G200600--Sobic002G416950 Sobic005G200600--Sobic009G059100 Sobic004G249400 Sobic004G249400 Sobic005G200600--Sobic004G249400 Sobic007G009600 Sobic007G009600 Sobic005G200600--Sobic007G009600 Sobic001G541300 Sobic001G541300 Sobic005G200600--Sobic001G541300 Sobic001G379300 Sobic001G379300 Sobic005G200600--Sobic001G379300 Sobic003G157500--Sobic006G025700 Sobic003G157500--Sobic009G059100 Sobic003G157500--Sobic005G020200 Sobic003G157500--Sobic004G253800 Sobic002G020100 Sobic002G020100 Sobic003G157500--Sobic002G020100 Sobic005G056201 Sobic005G056201 Sobic003G157500--Sobic005G056201 Sobic001G003600 Sobic001G003600 Sobic003G157500--Sobic001G003600 Sobic003G157500--Sobic005G200600 Sobic004G109000 Sobic004G109000 Sobic003G157500--Sobic004G109000 Sobic005G020200--Sobic003G157500 Sobic005G020200--Sobic009G059100 Sobic005G020200--Sobic005G200600 Sobic005G020200--Sobic004G253800 Sobic006G001400 Sobic006G001400 Sobic005G020200--Sobic006G001400 Sobic005G020200--Sobic005G056201 Sobic005G141000 Sobic005G141000 Sobic005G020200--Sobic005G141000 Sobic005G020200--Sobic006G025700 Sobic008G130700 Sobic008G130700 Sobic005G020200--Sobic008G130700 Sobic001G069500 Sobic001G069500 Sobic001G188600--Sobic001G069500 Sobic001G188600--Sobic006G114300 Sobic001G188600--Sobic001G357200 Sobic009G098100 Sobic009G098100 Sobic001G188600--Sobic009G098100 Sobic010G012900 Sobic010G012900 Sobic001G188600--Sobic010G012900 Sobic001G188600--Sobic004G109000 Sobic007G211100 Sobic007G211100 Sobic001G188600--Sobic007G211100 Sobic001G188600--Sobic004G253800 Sobic008G030000 Sobic008G030000 Sobic001G188600--Sobic008G030000 Sobic006G025700--Sobic003G157500 Sobic006G025700--Sobic009G059100 Sobic006G025700--Sobic002G020100 Sobic006G025700--Sobic004G253800 Sobic006G025700--Sobic001G003600 Sobic002G190100 Sobic002G190100 Sobic006G025700--Sobic002G190100 Sobic001G435600 Sobic001G435600 Sobic006G025700--Sobic001G435600 Sobic006G025700--Sobic004G109000 Sobic003G096100 Sobic003G096100 Sobic006G025700--Sobic003G096100 Sobic006G172700 Sobic006G172700 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic009G059100--Sobic006G025700 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic009G059100--Sobic003G096100 Sobic009G059100--Sobic001G435600 Sobic007G013400 Sobic007G013400 Sobic009G001500--Sobic007G013400 Sobic003G383500 Sobic003G383500 Sobic009G001500--Sobic003G383500 Sobic003G295800 Sobic003G295800 Sobic009G001500--Sobic003G295800 Sobic004G044200 Sobic004G044200 Sobic009G001500--Sobic004G044200 Sobic004G044000 Sobic004G044000 Sobic009G001500--Sobic004G044000 Sobic003G383600 Sobic003G383600 Sobic009G001500--Sobic003G383600 Sobic009G001500--Sobic007G211100 Sobic009G001500--Sobic008G030000 Sobic001G383900 Sobic001G383900 Sobic009G001500--Sobic001G383900 Sobic001G357200--Sobic001G188600 Sobic001G357200--Sobic006G114300 Sobic001G357200--Sobic010G012900 Sobic001G357200--Sobic009G001500 Sobic001G357200--Sobic008G030000 Sobic007G034500 Sobic007G034500 Sobic001G357200--Sobic007G034500 Sobic008G123600 Sobic008G123600 Sobic001G357200--Sobic008G123600 Sobic001G357200--Sobic001G069500 Sobic001G357200--Sobic003G383500 Sobic006G114300--Sobic001G188600 Sobic006G114300--Sobic001G357200 Sobic006G114300--Sobic004G109000 Sobic006G114300--Sobic001G069500 Sobic006G114300--Sobic010G012900 Sobic006G114300--Sobic003G383500 Sobic006G114300--Sobic004G253800 Sobic006G114300--Sobic007G211100 Sobic006G114300--Sobic007G013400
Octagon: transcription factors


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