Gene annotation
Transcriptome id Sobic.004G291500.1
Synonym Sb04g032620
Functional annotation LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
UniProt C5Y1G2
Pfam PF00234
Panther DB PTHR31731 PTHR31731:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G12520 : Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
RAP-DB (Rice) LOC_Os02g44320.1 : LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
MaizeGDB (Corn) Zm00025a052000 , Zm00025a021415 , Zm00025a003292 , Zm00025a000126 , Zm00025a052004
Brachypodium -
Barley HORVU4Hr1G087780.9 , HORVU1Hr1G053590.1 , HORVU1Hr1G053740.1 , HORVU4Hr1G087780.10 , HORVU4Hr1G087800.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
2 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
3 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
4 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
5 Sobic.002G280500 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.009G059100 Cupin domain containing protein, expressed -
7 Sobic.006G172700 LTPL122 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
8 Sobic.006G238000 LTPL128 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
10 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
11 Sobic.010G124200 expressed protein -
12 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.005G056201 - -
14 Sobic.001G188600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Rf1, mitochondrial precursor, putative, expressed -
15 Sobic.002G020100 chalcone synthase, putative, expressed -
16 Sobic.002G190800 expressed protein -
17 Sobic.009G098100 T-complex protein, putative, expressed -
18 Sobic.003G136400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peptidyl-prolyl cis-trans isomerase, putative, expressed K03768: PPIB, peptidyl-prolyl cis-trans isomerase B (cyclophilin B)
19 Sobic.001G389600 expressed protein -
20 Sobic.005G209900 expressed protein -


Gene co-expression network
sample Sobic004G291500 Sobic004G291500 Sobic004G001200 Sobic004G001200 Sobic004G291500--Sobic004G001200 Sobic005G196500 Sobic005G196500 Sobic004G291500--Sobic005G196500 Sobic006G001400 Sobic006G001400 Sobic004G291500--Sobic006G001400 Sobic006G233600 Sobic006G233600 Sobic004G291500--Sobic006G233600 Sobic002G280500 Sobic002G280500 Sobic004G291500--Sobic002G280500 Sobic009G059100 Sobic009G059100 Sobic004G291500--Sobic009G059100 Sobic006G172700 Sobic006G172700 Sobic004G291500--Sobic006G172700 Sobic006G238000 Sobic006G238000 Sobic004G291500--Sobic006G238000 Sobic001G478100 Sobic001G478100 Sobic004G291500--Sobic001G478100 Sobic004G001200--Sobic006G238000 Sobic004G001200--Sobic006G001400 Sobic004G001200--Sobic009G059100 Sobic004G001200--Sobic004G291500 Sobic005G020200 Sobic005G020200 Sobic004G001200--Sobic005G020200 Sobic004G001200--Sobic006G172700 Sobic004G001200--Sobic005G196500 Sobic004G300800 Sobic004G300800 Sobic004G001200--Sobic004G300800 Sobic002G020100 Sobic002G020100 Sobic004G001200--Sobic002G020100 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G209900 Sobic005G209900 Sobic005G196500--Sobic005G209900 Sobic010G107200 Sobic010G107200 Sobic005G196500--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic005G196500--Sobic005G227050 Sobic007G142300 Sobic007G142300 Sobic005G196500--Sobic007G142300 Sobic005G196500--Sobic004G001200 Sobic003G333000 Sobic003G333000 Sobic005G196500--Sobic003G333000 Sobic005G196500--Sobic004G291500 Sobic006G001400--Sobic005G196500 Sobic006G001400--Sobic004G001200 Sobic006G001400--Sobic009G059100 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G001400--Sobic006G233600 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic006G233600--Sobic005G196500 Sobic006G233600--Sobic010G107200 Sobic006G233600--Sobic001G478100 Sobic006G233600--Sobic005G209900 Sobic006G032800 Sobic006G032800 Sobic006G233600--Sobic006G032800 Sobic006G233600--Sobic006G001400 Sobic006G233600--Sobic007G142300 Sobic009G154100 Sobic009G154100 Sobic006G233600--Sobic009G154100 Sobic007G012800 Sobic007G012800 Sobic006G233600--Sobic007G012800 Sobic002G280500--Sobic006G238000 Sobic002G280500--Sobic004G291500 Sobic008G084200 Sobic008G084200 Sobic002G280500--Sobic008G084200 Sobic001G379100 Sobic001G379100 Sobic002G280500--Sobic001G379100 Sobic002G280500--Sobic009G059100 Sobic002G025300 Sobic002G025300 Sobic002G280500--Sobic002G025300 Sobic002G280500--Sobic010G124200 Sobic002G280500--Sobic006G172700 Sobic002G280500--Sobic004G001200 Sobic009G059100--Sobic006G172700 Sobic009G059100--Sobic003G157500 Sobic006G025700 Sobic006G025700 Sobic009G059100--Sobic006G025700 Sobic001G003600 Sobic001G003600 Sobic009G059100--Sobic001G003600 Sobic009G059100--Sobic002G020100 Sobic005G200600 Sobic005G200600 Sobic009G059100--Sobic005G200600 Sobic009G059100--Sobic005G056201 Sobic003G096100 Sobic003G096100 Sobic009G059100--Sobic003G096100 Sobic001G435600 Sobic001G435600 Sobic009G059100--Sobic001G435600 Sobic006G172700--Sobic001G003600 Sobic006G172700--Sobic009G059100 Sobic006G172700--Sobic002G020100 Sobic001G127700 Sobic001G127700 Sobic006G172700--Sobic001G127700 Sobic006G172700--Sobic005G056201 Sobic004G076000 Sobic004G076000 Sobic006G172700--Sobic004G076000 Sobic009G115050 Sobic009G115050 Sobic006G172700--Sobic009G115050 Sobic004G060700 Sobic004G060700 Sobic006G172700--Sobic004G060700 Sobic006G172700--Sobic003G096100 Sobic006G238000--Sobic008G084200 Sobic006G238000--Sobic004G001200 Sobic007G127600 Sobic007G127600 Sobic006G238000--Sobic007G127600 Sobic001G076500 Sobic001G076500 Sobic006G238000--Sobic001G076500 Sobic006G238000--Sobic009G059100 Sobic001G427000 Sobic001G427000 Sobic006G238000--Sobic001G427000 Sobic006G238000--Sobic006G172700 Sobic006G238000--Sobic002G280500 Sobic001G366500 Sobic001G366500 Sobic006G238000--Sobic001G366500 Sobic001G389600 Sobic001G389600 Sobic001G478100--Sobic001G389600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic002G403000 Sobic002G403000 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic001G478100--Sobic005G196500 Sobic001G478100--Sobic007G142300 Sobic010G165100 Sobic010G165100 Sobic001G478100--Sobic010G165100
Octagon: transcription factors


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