Gene annotation
Transcriptome id Sobic.001G389600.1
Synonym Sb01g036930
Functional annotation expressed protein
UniProt C5X1T4
Pfam PF00560 PF07714
Panther DB PTHR27000 PTHR27000:SF197
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10020 : Leucine-rich receptor-like protein kinase family protein
RAP-DB (Rice) LOC_Os03g20450.1 : expressed protein
MaizeGDB (Corn) Zm00025a052486 , Zm00025a019933
Brachypodium -
Barley HORVU4Hr1G052110.10 , HORVU4Hr1G052110.9 , HORVU4Hr1G052110.8 , HORVU4Hr1G052110.3 , HORVU4Hr1G052110.2 , HORVU4Hr1G052110.1 , HORVU4Hr1G052110.7 , HORVU4Hr1G052110.6 , HORVU4Hr1G052110.5 , HORVU4Hr1G052110.4
Wheat TraesCS4B02G177400 , TraesCS4B02G177400 , TraesCS4D02G179100 , TraesCS4A02G127200 , TraesCS4A02G127200 , TraesCS4A02G127200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G403000 eukaryotic aspartyl protease domain containing protein, expressed -
2 Sobic.010G165100 expressed protein -
3 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.002G045200 protein kinase, putative, expressed -
5 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.002G142500 expressed protein -
7 Sobic.002G246000 expressed protein -
8 Sobic.002G428000 expressed protein -
9 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
11 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
12 Sobic.007G142300 expressed protein -
13 Sobic.010G096200 expressed protein -
14 Sobic.006G274866 - -
15 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
16 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
17 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
18 Sobic.009G154100 expressed protein -
19 Sobic.003G018700 CIN-like (ClassII) Subclade 17 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
20 Sobic.005G209900 expressed protein -


Gene co-expression network
sample Sobic001G389600 Sobic001G389600 Sobic002G403000 Sobic002G403000 Sobic001G389600--Sobic002G403000 Sobic010G165100 Sobic010G165100 Sobic001G389600--Sobic010G165100 Sobic001G478100 Sobic001G478100 Sobic001G389600--Sobic001G478100 Sobic002G045200 Sobic002G045200 Sobic001G389600--Sobic002G045200 Sobic010G107200 Sobic010G107200 Sobic001G389600--Sobic010G107200 Sobic002G142500 Sobic002G142500 Sobic001G389600--Sobic002G142500 Sobic002G246000 Sobic002G246000 Sobic001G389600--Sobic002G246000 Sobic002G428000 Sobic002G428000 Sobic001G389600--Sobic002G428000 Sobic006G032800 Sobic006G032800 Sobic001G389600--Sobic006G032800 Sobic002G403000--Sobic001G389600 Sobic002G403000--Sobic001G478100 Sobic002G403000--Sobic002G428000 Sobic002G403000--Sobic010G165100 Sobic002G403000--Sobic002G045200 Sobic008G110400 Sobic008G110400 Sobic002G403000--Sobic008G110400 Sobic002G403000--Sobic002G246000 Sobic003G277200 Sobic003G277200 Sobic002G403000--Sobic003G277200 Sobic002G403000--Sobic010G107200 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic010G165100--Sobic002G403000 Sobic010G165100--Sobic006G032800 Sobic002G311000 Sobic002G311000 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic001G478100--Sobic001G389600 Sobic006G233600 Sobic006G233600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic005G196500 Sobic005G196500 Sobic001G478100--Sobic005G196500 Sobic007G142300 Sobic007G142300 Sobic001G478100--Sobic007G142300 Sobic001G478100--Sobic010G165100 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic006G241800 Sobic006G241800 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic005G209900 Sobic005G209900 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic009G154100 Sobic009G154100 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic002G142500--Sobic006G274866 Sobic006G257200 Sobic006G257200 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic002G142500--Sobic010G165100 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G142500--Sobic002G246000 Sobic002G142500--Sobic006G241800 Sobic002G246000--Sobic010G165100 Sobic002G246000--Sobic001G389600 Sobic002G246000--Sobic002G045200 Sobic002G246000--Sobic002G142500 Sobic002G246000--Sobic006G032800 Sobic002G246000--Sobic010G107200 Sobic002G246000--Sobic002G311000 Sobic002G246000--Sobic002G403000 Sobic002G246000--Sobic003G277200 Sobic002G428000--Sobic001G389600 Sobic002G428000--Sobic002G403000 Sobic003G283400 Sobic003G283400 Sobic002G428000--Sobic003G283400 Sobic009G151100 Sobic009G151100 Sobic002G428000--Sobic009G151100 Sobic002G428000--Sobic001G478100 Sobic002G428000--Sobic007G142300 Sobic002G428000--Sobic010G165100 Sobic002G428000--Sobic009G235700 Sobic004G344100 Sobic004G344100 Sobic002G428000--Sobic004G344100 Sobic006G044200 Sobic006G044200 Sobic006G032800--Sobic006G044200 Sobic006G032800--Sobic010G107200 Sobic005G188500 Sobic005G188500 Sobic006G032800--Sobic005G188500 Sobic006G032800--Sobic006G233600 Sobic003G018700 Sobic003G018700 Sobic006G032800--Sobic003G018700 Sobic006G032800--Sobic009G154100 Sobic006G032800--Sobic001G389600 Sobic006G032800--Sobic001G478100 Sobic007G012800 Sobic007G012800 Sobic006G032800--Sobic007G012800
Octagon: transcription factors


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