Gene annotation
Transcriptome id Sobic.009G154100.1
Synonym Sb09g021760
Functional annotation expressed protein
UniProt C5YYQ3
Pfam -
Panther DB PTHR33177 PTHR33177:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G11600 : -
RAP-DB (Rice) LOC_Os05g37030.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK06028 , KQK10733 , PNT73239
Barley HORVU1Hr1G074000.1 , HORVU1Hr1G074000.2 , HORVU1Hr1G074000.3 , HORVU1Hr1G074000.4 , HORVU1Hr1G074000.5 , HORVU1Hr1G074000.6 , HORVU1Hr1G074000.7 , HORVU1Hr1G074000.8
Wheat TraesCS1B02G284900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
2 Sobic.005G209900 expressed protein -
3 Sobic.002G315000 - -
4 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
5 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.007G189400 BEE 1, putative, expressed -
7 Sobic.005G227050 - -
8 Sobic.001G221900 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
9 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
10 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G018700 CIN-like (ClassII) Subclade 17 TCP(PubMedID : 21444336)@SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
12 Sobic.001G356400 expansin precursor, putative, expressed -
13 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
14 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
15 Sobic.006G044200 glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.002G072700 carboxyl-terminal peptidase, putative, expressed -
17 Sobic.005G188500 expressed protein -
18 Sobic.001G228100 gene responsible for epi-cuticular wax accumulation in sorghum.(PubMedID : 29379518)@GDSL-like lipase/acylhydrolase, putative, expressed -
19 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
20 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase


Gene co-expression network
sample Sobic009G154100 Sobic009G154100 Sobic010G107200 Sobic010G107200 Sobic009G154100--Sobic010G107200 Sobic005G209900 Sobic005G209900 Sobic009G154100--Sobic005G209900 Sobic002G315000 Sobic002G315000 Sobic009G154100--Sobic002G315000 Sobic007G012800 Sobic007G012800 Sobic009G154100--Sobic007G012800 Sobic002G179700 Sobic002G179700 Sobic009G154100--Sobic002G179700 Sobic007G189400 Sobic007G189400 Sobic009G154100--Sobic007G189400 Sobic005G227050 Sobic005G227050 Sobic009G154100--Sobic005G227050 Sobic001G221900 Sobic001G221900 Sobic009G154100--Sobic001G221900 Sobic006G032800 Sobic006G032800 Sobic009G154100--Sobic006G032800 Sobic010G107200--Sobic005G209900 Sobic005G196500 Sobic005G196500 Sobic010G107200--Sobic005G196500 Sobic006G233600 Sobic006G233600 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic007G142300 Sobic007G142300 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic001G478100 Sobic001G478100 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic005G209900--Sobic010G107200 Sobic005G209900--Sobic005G196500 Sobic005G209900--Sobic009G154100 Sobic005G209900--Sobic005G227050 Sobic005G209900--Sobic006G233600 Sobic005G209900--Sobic007G012800 Sobic005G209900--Sobic007G142300 Sobic005G209900--Sobic005G147800 Sobic005G209900--Sobic002G179700 Sobic002G315000--Sobic009G154100 Sobic003G333000 Sobic003G333000 Sobic002G315000--Sobic003G333000 Sobic003G420800 Sobic003G420800 Sobic002G315000--Sobic003G420800 Sobic002G315000--Sobic001G221900 Sobic001G228100 Sobic001G228100 Sobic002G315000--Sobic001G228100 Sobic002G315000--Sobic005G227050 Sobic002G072700 Sobic002G072700 Sobic002G315000--Sobic002G072700 Sobic001G482300 Sobic001G482300 Sobic002G315000--Sobic001G482300 Sobic002G315000--Sobic002G179700 Sobic007G012800--Sobic005G209900 Sobic001G488400 Sobic001G488400 Sobic007G012800--Sobic001G488400 Sobic007G012800--Sobic009G154100 Sobic009G134000 Sobic009G134000 Sobic007G012800--Sobic009G134000 Sobic005G188500 Sobic005G188500 Sobic007G012800--Sobic005G188500 Sobic007G012800--Sobic010G107200 Sobic007G103800 Sobic007G103800 Sobic007G012800--Sobic007G103800 Sobic007G012800--Sobic006G032800 Sobic003G277200 Sobic003G277200 Sobic007G012800--Sobic003G277200 Sobic002G179700--Sobic009G154100 Sobic002G179700--Sobic005G227050 Sobic002G179700--Sobic005G209900 Sobic001G356400 Sobic001G356400 Sobic002G179700--Sobic001G356400 Sobic002G179700--Sobic005G196500 Sobic002G179700--Sobic006G233600 Sobic002G179700--Sobic010G107200 Sobic002G179700--Sobic002G315000 Sobic002G179700--Sobic002G072700 Sobic007G189400--Sobic002G072700 Sobic007G189400--Sobic005G188500 Sobic009G254500 Sobic009G254500 Sobic007G189400--Sobic009G254500 Sobic003G339600 Sobic003G339600 Sobic007G189400--Sobic003G339600 Sobic007G189400--Sobic001G488400 Sobic010G020600 Sobic010G020600 Sobic007G189400--Sobic010G020600 Sobic006G044200 Sobic006G044200 Sobic007G189400--Sobic006G044200 Sobic001G119200 Sobic001G119200 Sobic007G189400--Sobic001G119200 Sobic002G139800 Sobic002G139800 Sobic007G189400--Sobic002G139800 Sobic005G227050--Sobic005G209900 Sobic005G227050--Sobic005G196500 Sobic005G227050--Sobic009G154100 Sobic005G227050--Sobic002G179700 Sobic005G227050--Sobic001G356400 Sobic005G227050--Sobic010G107200 Sobic006G001400 Sobic006G001400 Sobic005G227050--Sobic006G001400 Sobic005G227050--Sobic007G103800 Sobic007G123200 Sobic007G123200 Sobic005G227050--Sobic007G123200 Sobic003G070600 Sobic003G070600 Sobic001G221900--Sobic003G070600 Sobic009G235700 Sobic009G235700 Sobic001G221900--Sobic009G235700 Sobic001G221900--Sobic010G020600 Sobic010G078700 Sobic010G078700 Sobic001G221900--Sobic010G078700 Sobic001G221900--Sobic003G339600 Sobic001G199400 Sobic001G199400 Sobic001G221900--Sobic001G199400 Sobic004G248100 Sobic004G248100 Sobic001G221900--Sobic004G248100 Sobic001G074000 Sobic001G074000 Sobic001G221900--Sobic001G074000 Sobic003G113500 Sobic003G113500 Sobic001G221900--Sobic003G113500 Sobic006G032800--Sobic006G044200 Sobic006G032800--Sobic010G107200 Sobic006G032800--Sobic005G188500 Sobic006G032800--Sobic006G233600 Sobic003G018700 Sobic003G018700 Sobic006G032800--Sobic003G018700 Sobic006G032800--Sobic009G154100 Sobic006G032800--Sobic001G389600 Sobic006G032800--Sobic001G478100 Sobic006G032800--Sobic007G012800
Octagon: transcription factors


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