Gene annotation
Transcriptome id Sobic.006G233600.1
Synonym SbEPF1, EPF1, Sb06g030110, epidermal patterning factor/EPF-like
Functional annotation Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure. (PubMedID : 23755192)
expressed protein
UniProt A0A1B6PNJ2
Pfam -
Panther DB PTHR33109 PTHR33109:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G34245 : Putative membrane lipoprotein
RAP-DB (Rice) LOC_Os04g54490.1 : expressed protein
MaizeGDB (Corn) Zm00025a057151
Brachypodium PNT61953 , PNT61952
Barley -
Wheat TraesCS2B02G556200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
2 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
3 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
4 Sobic.005G209900 expressed protein -
5 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
6 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
7 Sobic.007G142300 expressed protein -
8 Sobic.009G154100 expressed protein -
9 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
10 Sobic.010G143300 carboxyl-terminal peptidase, putative, expressed -
11 Sobic.010G124200 expressed protein -
12 Sobic.001G389600 expressed protein -
13 Sobic.004G291500 LTPL113 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
15 Sobic.001G164500 MYB family transcription factor, putative, expressed -
16 Sobic.002G164700 ZOS9-04 - C2H2 zinc finger protein, expressed -
17 Sobic.005G188500 expressed protein -
18 Sobic.010G202700 AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
19 Sobic.010G096200 expressed protein -
20 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -


Gene co-expression network
sample Sobic006G233600 Sobic006G233600 Sobic005G196500 Sobic005G196500 Sobic006G233600--Sobic005G196500 Sobic010G107200 Sobic010G107200 Sobic006G233600--Sobic010G107200 Sobic001G478100 Sobic001G478100 Sobic006G233600--Sobic001G478100 Sobic005G209900 Sobic005G209900 Sobic006G233600--Sobic005G209900 Sobic006G032800 Sobic006G032800 Sobic006G233600--Sobic006G032800 Sobic006G001400 Sobic006G001400 Sobic006G233600--Sobic006G001400 Sobic007G142300 Sobic007G142300 Sobic006G233600--Sobic007G142300 Sobic009G154100 Sobic009G154100 Sobic006G233600--Sobic009G154100 Sobic007G012800 Sobic007G012800 Sobic006G233600--Sobic007G012800 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G196500--Sobic005G209900 Sobic005G196500--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic005G196500--Sobic005G227050 Sobic005G196500--Sobic007G142300 Sobic004G001200 Sobic004G001200 Sobic005G196500--Sobic004G001200 Sobic003G333000 Sobic003G333000 Sobic005G196500--Sobic003G333000 Sobic004G291500 Sobic004G291500 Sobic005G196500--Sobic004G291500 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic001G389600 Sobic001G389600 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic001G478100--Sobic001G389600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic002G403000 Sobic002G403000 Sobic001G478100--Sobic002G403000 Sobic010G143300 Sobic010G143300 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic001G478100--Sobic005G196500 Sobic001G478100--Sobic007G142300 Sobic010G165100 Sobic010G165100 Sobic001G478100--Sobic010G165100 Sobic005G209900--Sobic010G107200 Sobic005G209900--Sobic005G196500 Sobic005G209900--Sobic009G154100 Sobic005G209900--Sobic005G227050 Sobic005G209900--Sobic006G233600 Sobic005G209900--Sobic007G012800 Sobic005G209900--Sobic007G142300 Sobic005G209900--Sobic005G147800 Sobic002G179700 Sobic002G179700 Sobic005G209900--Sobic002G179700 Sobic006G044200 Sobic006G044200 Sobic006G032800--Sobic006G044200 Sobic006G032800--Sobic010G107200 Sobic005G188500 Sobic005G188500 Sobic006G032800--Sobic005G188500 Sobic006G032800--Sobic006G233600 Sobic003G018700 Sobic003G018700 Sobic006G032800--Sobic003G018700 Sobic006G032800--Sobic009G154100 Sobic006G032800--Sobic001G389600 Sobic006G032800--Sobic001G478100 Sobic006G032800--Sobic007G012800 Sobic006G001400--Sobic005G196500 Sobic006G001400--Sobic004G001200 Sobic009G059100 Sobic009G059100 Sobic006G001400--Sobic009G059100 Sobic005G020200 Sobic005G020200 Sobic006G001400--Sobic005G020200 Sobic010G124200 Sobic010G124200 Sobic006G001400--Sobic010G124200 Sobic003G157500 Sobic003G157500 Sobic006G001400--Sobic003G157500 Sobic006G001400--Sobic006G233600 Sobic006G172700 Sobic006G172700 Sobic006G001400--Sobic006G172700 Sobic005G056201 Sobic005G056201 Sobic006G001400--Sobic005G056201 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic002G397400 Sobic002G397400 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic001G265900 Sobic001G265900 Sobic007G142300--Sobic001G265900 Sobic007G142300--Sobic005G196500 Sobic007G142300--Sobic006G233600 Sobic007G142300--Sobic010G124200 Sobic007G142300--Sobic006G032800 Sobic009G154100--Sobic010G107200 Sobic009G154100--Sobic005G209900 Sobic002G315000 Sobic002G315000 Sobic009G154100--Sobic002G315000 Sobic009G154100--Sobic007G012800 Sobic009G154100--Sobic002G179700 Sobic007G189400 Sobic007G189400 Sobic009G154100--Sobic007G189400 Sobic009G154100--Sobic005G227050 Sobic001G221900 Sobic001G221900 Sobic009G154100--Sobic001G221900 Sobic009G154100--Sobic006G032800 Sobic007G012800--Sobic005G209900 Sobic001G488400 Sobic001G488400 Sobic007G012800--Sobic001G488400 Sobic007G012800--Sobic009G154100 Sobic009G134000 Sobic009G134000 Sobic007G012800--Sobic009G134000 Sobic007G012800--Sobic005G188500 Sobic007G012800--Sobic010G107200 Sobic007G103800 Sobic007G103800 Sobic007G012800--Sobic007G103800 Sobic007G012800--Sobic006G032800 Sobic003G277200 Sobic003G277200 Sobic007G012800--Sobic003G277200
Octagon: transcription factors


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