Gene annotation
Transcriptome id Sobic.010G143300.2,Sobic.010G143300.3,Sobic.010G143300.1
Synonym Sb10g017800
Functional annotation carboxyl-terminal peptidase, putative, expressed
UniProt A0A1W0VSZ7 , C5Z314 , A0A1W0VT08
Pfam PF03080 PF14365 PF14365 PF03080
Panther DB PTHR31589 PTHR31589:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G23340 : Protein of Unknown Function (DUF239)
RAP-DB (Rice) LOC_Os06g28000.1 : carboxyl-terminal peptidase, putative, expressed
MaizeGDB (Corn) Zm00025a023262 , Zm00025a050744
Brachypodium KQK02907
Barley -
Wheat TraesCS3B02G228700 , TraesCS3D02G202200 , TraesCS3A02G201800 , TraesCS1D02G115500 , TraesCS1A02G113900 , TraesCS1A02G113900 , TraesCS3B02G107900 , TraesCS1B02G134200 , TraesCS7D02G234500 , TraesCS7D02G234500 , TraesCS3D02G092800 , TraesCS3D02G092800 , TraesCS7B02G132600 , TraesCS7A02G234300
Populus PNT10212 , PNT10211


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G134000 receptor-like protein kinase precursor, putative, expressed -
2 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
3 Sobic.006G233600 Homologous to EPF/EPFL genes in Arabidopsis. Modelling of protein structure.(PubMedID : 23755192)@expressed protein -
4 Sobic.005G196500 embryogenesis transmembrane protein, putative, expressed -
5 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
6 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
7 Sobic.006G178800 DUF630/DUF632 domains containing protein, putative, expressed -
8 Sobic.003G333000 LTPL65 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
9 Sobic.007G142300 expressed protein -
10 Sobic.001G389600 expressed protein -
11 Sobic.005G147800 Ser/Thr protein phosphatase family protein, putative, expressed -
12 Sobic.010G165100 expressed protein -
13 Sobic.005G209900 expressed protein -
14 Sobic.002G246000 expressed protein -
15 Sobic.007G012800 Leucine Rich Repeat family protein, expressed -
16 Sobic.006G001400 Leucine Rich Repeat family protein, expressed -
17 Sobic.004G001200 GDSL-like lipase/acylhydrolase, putative, expressed -
18 Sobic.002G179700 3-ketoacyl-CoA synthase precursor, putative, expressed K15397: 3-ketoacyl-CoA synthase
19 Sobic.001G265900 "similar to Proline-rich protein precursor, structural protein of cell walls in plants"(PubMedID : 24655390)@similar to Proline-rich protein precursor(PubMedID : 24655390)@POEI13 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
20 Sobic.005G227000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aspartic protease, putative, expressed -


Gene co-expression network
sample Sobic010G143300 Sobic010G143300 Sobic009G134000 Sobic009G134000 Sobic010G143300--Sobic009G134000 Sobic001G478100 Sobic001G478100 Sobic010G143300--Sobic001G478100 Sobic006G233600 Sobic006G233600 Sobic010G143300--Sobic006G233600 Sobic005G196500 Sobic005G196500 Sobic010G143300--Sobic005G196500 Sobic010G107200 Sobic010G107200 Sobic010G143300--Sobic010G107200 Sobic006G032800 Sobic006G032800 Sobic010G143300--Sobic006G032800 Sobic006G178800 Sobic006G178800 Sobic010G143300--Sobic006G178800 Sobic003G333000 Sobic003G333000 Sobic010G143300--Sobic003G333000 Sobic007G142300 Sobic007G142300 Sobic010G143300--Sobic007G142300 Sobic007G012800 Sobic007G012800 Sobic009G134000--Sobic007G012800 Sobic009G134000--Sobic010G143300 Sobic009G154100 Sobic009G154100 Sobic009G134000--Sobic009G154100 Sobic003G277200 Sobic003G277200 Sobic009G134000--Sobic003G277200 Sobic009G134000--Sobic006G178800 Sobic009G134000--Sobic010G107200 Sobic001G389600 Sobic001G389600 Sobic009G134000--Sobic001G389600 Sobic009G134000--Sobic001G478100 Sobic005G130700 Sobic005G130700 Sobic009G134000--Sobic005G130700 Sobic001G478100--Sobic001G389600 Sobic001G478100--Sobic006G233600 Sobic001G478100--Sobic010G107200 Sobic002G403000 Sobic002G403000 Sobic001G478100--Sobic002G403000 Sobic001G478100--Sobic010G143300 Sobic001G478100--Sobic006G032800 Sobic001G478100--Sobic005G196500 Sobic001G478100--Sobic007G142300 Sobic010G165100 Sobic010G165100 Sobic001G478100--Sobic010G165100 Sobic006G233600--Sobic005G196500 Sobic006G233600--Sobic010G107200 Sobic006G233600--Sobic001G478100 Sobic005G209900 Sobic005G209900 Sobic006G233600--Sobic005G209900 Sobic006G233600--Sobic006G032800 Sobic006G001400 Sobic006G001400 Sobic006G233600--Sobic006G001400 Sobic006G233600--Sobic007G142300 Sobic006G233600--Sobic009G154100 Sobic006G233600--Sobic007G012800 Sobic005G196500--Sobic006G001400 Sobic005G196500--Sobic006G233600 Sobic005G196500--Sobic005G209900 Sobic005G196500--Sobic010G107200 Sobic005G227050 Sobic005G227050 Sobic005G196500--Sobic005G227050 Sobic005G196500--Sobic007G142300 Sobic004G001200 Sobic004G001200 Sobic005G196500--Sobic004G001200 Sobic005G196500--Sobic003G333000 Sobic004G291500 Sobic004G291500 Sobic005G196500--Sobic004G291500 Sobic010G107200--Sobic005G209900 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic010G107200--Sobic007G142300 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic006G044200 Sobic006G044200 Sobic006G032800--Sobic006G044200 Sobic006G032800--Sobic010G107200 Sobic005G188500 Sobic005G188500 Sobic006G032800--Sobic005G188500 Sobic006G032800--Sobic006G233600 Sobic003G018700 Sobic003G018700 Sobic006G032800--Sobic003G018700 Sobic006G032800--Sobic009G154100 Sobic006G032800--Sobic001G389600 Sobic006G032800--Sobic001G478100 Sobic006G032800--Sobic007G012800 Sobic006G178800--Sobic009G134000 Sobic006G178800--Sobic010G143300 Sobic006G178800--Sobic003G333000 Sobic007G113900 Sobic007G113900 Sobic006G178800--Sobic007G113900 Sobic002G396200 Sobic002G396200 Sobic006G178800--Sobic002G396200 Sobic002G142500 Sobic002G142500 Sobic006G178800--Sobic002G142500 Sobic010G207700 Sobic010G207700 Sobic006G178800--Sobic010G207700 Sobic004G044100 Sobic004G044100 Sobic006G178800--Sobic004G044100 Sobic006G178800--Sobic005G227050 Sobic003G333000--Sobic010G107200 Sobic003G333000--Sobic005G196500 Sobic003G333000--Sobic009G154100 Sobic002G315000 Sobic002G315000 Sobic003G333000--Sobic002G315000 Sobic003G333000--Sobic005G209900 Sobic002G201100 Sobic002G201100 Sobic003G333000--Sobic002G201100 Sobic003G333000--Sobic006G001400 Sobic003G333000--Sobic001G478100 Sobic003G333000--Sobic005G227050 Sobic007G142300--Sobic005G147800 Sobic007G142300--Sobic010G107200 Sobic002G397400 Sobic002G397400 Sobic007G142300--Sobic002G397400 Sobic007G142300--Sobic005G209900 Sobic001G265900 Sobic001G265900 Sobic007G142300--Sobic001G265900 Sobic007G142300--Sobic005G196500 Sobic007G142300--Sobic006G233600 Sobic010G124200 Sobic010G124200 Sobic007G142300--Sobic010G124200 Sobic007G142300--Sobic006G032800
Octagon: transcription factors


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