Gene annotation
Transcriptome id Sobic.002G246000.1
Synonym Sb02g028255
Functional annotation expressed protein
UniProt C5X3W0
Pfam -
Panther DB PTHR31344 PTHR31344:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G42320 : nucleolar protein gar2-related
RAP-DB (Rice) LOC_Os09g31230.1 : expressed protein
MaizeGDB (Corn) Zm00025a005073 , Zm00025a047438
Brachypodium KQJ90739 , KQJ98902 , KQJ90740
Barley HORVU5Hr1G073010.10 , HORVU5Hr1G073010.11 , HORVU5Hr1G073010.12 , HORVU5Hr1G073010.13 , HORVU5Hr1G073010.8 , HORVU5Hr1G073010.9 , HORVU5Hr1G073010.6 , HORVU5Hr1G073010.7 , HORVU5Hr1G073010.4 , HORVU5Hr1G073010.5 , HORVU5Hr1G073010.2 , HORVU5Hr1G073010.3 , HORVU5Hr1G073010.1
Wheat TraesCS5B02G263200 , TraesCS5D02G271600 , TraesCS5A02G264000 , TraesCS5A02G264000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G165100 expressed protein -
2 Sobic.001G389600 expressed protein -
3 Sobic.002G045200 protein kinase, putative, expressed -
4 Sobic.002G142500 expressed protein -
5 Sobic.006G032800 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
6 Sobic.010G107200 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
7 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
8 Sobic.002G403000 eukaryotic aspartyl protease domain containing protein, expressed -
9 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
10 Sobic.001G478100 aspartic proteinase nepenthesin precursor, putative, expressed -
11 Sobic.008G143600 expressed protein -
12 Sobic.006G274866 - -
13 Sobic.006G125800 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
14 Sobic.007G142300 expressed protein -
15 Sobic.002G382500 heavy metal-associated domain containing protein, expressed -
16 Sobic.001G074100 kinesin motor domain containing protein, putative, expressed K10401: kinesin family member 18/19
17 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
18 Sobic.009G235700 transporter family protein, putative, expressed K08145: SLC2A8, MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8
19 Sobic.006G182500 WD-40 repeat family protein, putative, expressed -
20 Sobic.010G143300 carboxyl-terminal peptidase, putative, expressed -


Gene co-expression network
sample Sobic002G246000 Sobic002G246000 Sobic010G165100 Sobic010G165100 Sobic002G246000--Sobic010G165100 Sobic001G389600 Sobic001G389600 Sobic002G246000--Sobic001G389600 Sobic002G045200 Sobic002G045200 Sobic002G246000--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic002G246000--Sobic002G142500 Sobic006G032800 Sobic006G032800 Sobic002G246000--Sobic006G032800 Sobic010G107200 Sobic010G107200 Sobic002G246000--Sobic010G107200 Sobic002G311000 Sobic002G311000 Sobic002G246000--Sobic002G311000 Sobic002G403000 Sobic002G403000 Sobic002G246000--Sobic002G403000 Sobic003G277200 Sobic003G277200 Sobic002G246000--Sobic003G277200 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic010G165100--Sobic002G403000 Sobic010G165100--Sobic006G032800 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic001G389600--Sobic002G403000 Sobic001G389600--Sobic010G165100 Sobic001G478100 Sobic001G478100 Sobic001G389600--Sobic001G478100 Sobic001G389600--Sobic002G045200 Sobic001G389600--Sobic010G107200 Sobic001G389600--Sobic002G142500 Sobic001G389600--Sobic002G246000 Sobic002G428000 Sobic002G428000 Sobic001G389600--Sobic002G428000 Sobic001G389600--Sobic006G032800 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic006G241800 Sobic006G241800 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic002G142500--Sobic006G274866 Sobic006G257200 Sobic006G257200 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic002G142500--Sobic010G165100 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G142500--Sobic002G246000 Sobic002G142500--Sobic006G241800 Sobic006G044200 Sobic006G044200 Sobic006G032800--Sobic006G044200 Sobic006G032800--Sobic010G107200 Sobic005G188500 Sobic005G188500 Sobic006G032800--Sobic005G188500 Sobic006G233600 Sobic006G233600 Sobic006G032800--Sobic006G233600 Sobic003G018700 Sobic003G018700 Sobic006G032800--Sobic003G018700 Sobic009G154100 Sobic009G154100 Sobic006G032800--Sobic009G154100 Sobic006G032800--Sobic001G389600 Sobic006G032800--Sobic001G478100 Sobic007G012800 Sobic007G012800 Sobic006G032800--Sobic007G012800 Sobic005G209900 Sobic005G209900 Sobic010G107200--Sobic005G209900 Sobic005G196500 Sobic005G196500 Sobic010G107200--Sobic005G196500 Sobic010G107200--Sobic006G233600 Sobic010G107200--Sobic009G154100 Sobic010G107200--Sobic006G032800 Sobic007G142300 Sobic007G142300 Sobic010G107200--Sobic007G142300 Sobic010G107200--Sobic001G389600 Sobic010G107200--Sobic001G478100 Sobic005G147800 Sobic005G147800 Sobic010G107200--Sobic005G147800 Sobic002G311000--Sobic006G241800 Sobic003G291000 Sobic003G291000 Sobic002G311000--Sobic003G291000 Sobic003G078300 Sobic003G078300 Sobic002G311000--Sobic003G078300 Sobic002G311000--Sobic002G142500 Sobic002G311000--Sobic002G045200 Sobic002G311000--Sobic010G211800 Sobic002G311000--Sobic001G074100 Sobic002G311000--Sobic010G165100 Sobic002G311000--Sobic006G257200 Sobic002G403000--Sobic001G389600 Sobic002G403000--Sobic001G478100 Sobic002G403000--Sobic002G428000 Sobic002G403000--Sobic010G165100 Sobic002G403000--Sobic002G045200 Sobic008G110400 Sobic008G110400 Sobic002G403000--Sobic008G110400 Sobic002G403000--Sobic002G246000 Sobic002G403000--Sobic003G277200 Sobic002G403000--Sobic010G107200 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic008G039800 Sobic008G039800 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400
Octagon: transcription factors


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