Gene annotation
Transcriptome id Sobic.002G377300.1
Synonym Sb02g039460, CRK
Functional annotation CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
UniProt C5X2F5
Pfam PF06293
Panther DB PTHR24349 PTHR24349:SF115
NCBI CDD KOG0032; Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily
KEGG Orthology -
Gene Ontology GO:0016773; phosphotransferase activity, alcohol group as acceptor GO:0016020membrane GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT3G50530 : CDPK-related kinase
RAP-DB (Rice) LOC_Os07g42770.1 : CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
MaizeGDB (Corn) Zm00025a041730 , Zm00025a018475 , Zm00025a048777 , Zm00025a015229
Brachypodium KQK15185
Barley HORVU2Hr1G030520.8 , HORVU2Hr1G030520.9 , HORVU2Hr1G030520.1 , HORVU2Hr1G030520.2 , HORVU2Hr1G030520.3 , HORVU2Hr1G030520.4 , HORVU2Hr1G030520.5 , HORVU2Hr1G030520.6 , HORVU2Hr1G030520.7 , HORVU2Hr1G030520.12 , HORVU2Hr1G030520.10 , HORVU2Hr1G030520.11
Wheat TraesCS2A02G165800 , TraesCS2A02G165800 , TraesCS2D02G173100 , TraesCS2D02G173100 , TraesCS2B02G191800
Populus -


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cDNA sequences
Sobic.002G377300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
2 Sobic.001G371700 zinc finger protein, putative, expressed -
3 Sobic.010G165100 expressed protein -
4 Sobic.002G142500 expressed protein -
5 Sobic.009G231100 3-deoxy-manno-octulosonate cytidylyltransferase, putative, expressed K00979: 3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase)
6 Sobic.001G047200 carboxyl-terminal peptidase, putative, expressed -
7 Sobic.008G143600 expressed protein -
8 Sobic.002G225000 remorin C-terminal domain containing protein, putative, expressed -
9 Sobic.002G246000 expressed protein -
10 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.002G311000 "Receptor-like kinase(Ortholog in rice:Huang et al., 2012)"(PubMedID : 31659859)@leucine-rich repeat family protein, putative, expressed -
12 Sobic.003G078300 leucine-rich repeat protein-related, putative, expressed -
13 Sobic.001G389600 expressed protein -
14 Sobic.006G274866 - -
15 Sobic.010G135300 expressed protein -
16 Sobic.006G257200 kinesin motor domain containing protein, putative, expressed -
17 Sobic.003G223100 polygalacturonase, putative, expressed -
18 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
19 Sobic.001G405000 MRH1, putative, expressed -
20 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase


Gene co-expression network
sample Sobic002G377300 Sobic002G377300 Sobic009G055900 Sobic009G055900 Sobic002G377300--Sobic009G055900 Sobic001G371700 Sobic001G371700 Sobic002G377300--Sobic001G371700 Sobic010G165100 Sobic010G165100 Sobic002G377300--Sobic010G165100 Sobic002G142500 Sobic002G142500 Sobic002G377300--Sobic002G142500 Sobic009G231100 Sobic009G231100 Sobic002G377300--Sobic009G231100 Sobic001G047200 Sobic001G047200 Sobic002G377300--Sobic001G047200 Sobic008G143600 Sobic008G143600 Sobic002G377300--Sobic008G143600 Sobic002G225000 Sobic002G225000 Sobic002G377300--Sobic002G225000 Sobic002G246000 Sobic002G246000 Sobic002G377300--Sobic002G246000 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic001G405000 Sobic001G405000 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic004G243400 Sobic004G243400 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic001G371700--Sobic002G377300 Sobic004G118800 Sobic004G118800 Sobic001G371700--Sobic004G118800 Sobic003G078300 Sobic003G078300 Sobic001G371700--Sobic003G078300 Sobic008G101900 Sobic008G101900 Sobic001G371700--Sobic008G101900 Sobic006G257200 Sobic006G257200 Sobic001G371700--Sobic006G257200 Sobic001G371700--Sobic001G047200 Sobic002G272400 Sobic002G272400 Sobic001G371700--Sobic002G272400 Sobic002G311000 Sobic002G311000 Sobic001G371700--Sobic002G311000 Sobic003G223000 Sobic003G223000 Sobic001G371700--Sobic003G223000 Sobic010G165100--Sobic002G246000 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic002G045200 Sobic002G045200 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic002G403000 Sobic002G403000 Sobic010G165100--Sobic002G403000 Sobic006G032800 Sobic006G032800 Sobic010G165100--Sobic006G032800 Sobic010G165100--Sobic002G311000 Sobic004G243800 Sobic004G243800 Sobic010G165100--Sobic004G243800 Sobic002G142500--Sobic006G274866 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic002G142500--Sobic010G165100 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G142500--Sobic002G246000 Sobic006G241800 Sobic006G241800 Sobic002G142500--Sobic006G241800 Sobic009G201900 Sobic009G201900 Sobic009G231100--Sobic009G201900 Sobic009G231100--Sobic002G225000 Sobic009G231100--Sobic002G377300 Sobic001G518200 Sobic001G518200 Sobic009G231100--Sobic001G518200 Sobic003G420900 Sobic003G420900 Sobic009G231100--Sobic003G420900 Sobic009G231100--Sobic003G223000 Sobic005G031000 Sobic005G031000 Sobic009G231100--Sobic005G031000 Sobic001G104300 Sobic001G104300 Sobic009G231100--Sobic001G104300 Sobic005G022000 Sobic005G022000 Sobic009G231100--Sobic005G022000 Sobic001G047200--Sobic002G311000 Sobic001G047200--Sobic002G142500 Sobic010G135300 Sobic010G135300 Sobic001G047200--Sobic010G135300 Sobic001G047200--Sobic002G377300 Sobic003G096300 Sobic003G096300 Sobic001G047200--Sobic003G096300 Sobic001G482300 Sobic001G482300 Sobic001G047200--Sobic001G482300 Sobic003G420800 Sobic003G420800 Sobic001G047200--Sobic003G420800 Sobic001G157100 Sobic001G157100 Sobic001G047200--Sobic001G157100 Sobic009G148200 Sobic009G148200 Sobic001G047200--Sobic009G148200 Sobic008G143600--Sobic009G055900 Sobic008G143600--Sobic002G246000 Sobic008G143600--Sobic002G377300 Sobic008G008500 Sobic008G008500 Sobic008G143600--Sobic008G008500 Sobic008G143600--Sobic004G109000 Sobic008G143600--Sobic006G001400 Sobic007G211100 Sobic007G211100 Sobic008G143600--Sobic007G211100 Sobic002G209800 Sobic002G209800 Sobic008G143600--Sobic002G209800 Sobic008G143600--Sobic010G165100 Sobic002G225000--Sobic009G231100 Sobic002G225000--Sobic003G078300 Sobic002G225000--Sobic002G377300 Sobic001G379100 Sobic001G379100 Sobic002G225000--Sobic001G379100 Sobic002G225000--Sobic010G165100 Sobic003G148400 Sobic003G148400 Sobic002G225000--Sobic003G148400 Sobic002G225000--Sobic003G223000 Sobic002G388600 Sobic002G388600 Sobic002G225000--Sobic002G388600 Sobic002G078000 Sobic002G078000 Sobic002G225000--Sobic002G078000 Sobic002G246000--Sobic010G165100 Sobic002G246000--Sobic001G389600 Sobic002G246000--Sobic002G045200 Sobic002G246000--Sobic002G142500 Sobic002G246000--Sobic006G032800 Sobic010G107200 Sobic010G107200 Sobic002G246000--Sobic010G107200 Sobic002G246000--Sobic002G311000 Sobic002G246000--Sobic002G403000 Sobic003G277200 Sobic003G277200 Sobic002G246000--Sobic003G277200
Octagon: transcription factors


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