Gene annotation
Transcriptome id Sobic.003G165800.1
Synonym Sb03g015470
Functional annotation UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed
UniProt C5XKM4
Pfam PF03033 PF04101
Panther DB PTHR21015 PTHR21015:SF22
NCBI CDD -
KEGG Orthology K02563; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0005975carbohydrate metabolic process


Orthologs (automatic annotation)
TAIR AT1G73740 : UDP-Glycosyltransferase superfamily protein
RAP-DB (Rice) LOC_Os01g33230.1 : UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed
MaizeGDB (Corn) Zm00025a024658
Brachypodium PNT70583 , PNT70584 , PNT70585 , PNT70586 , PNT70587
Barley -
Wheat TraesCS3D02G201600 , TraesCS3B02G229400
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G104300 differentiation protein, putative, expressed K09761: 16S rRNA (uracil1498-N3)-methyltransferase
2 Sobic.002G141900 -(PubMedID : 26976818)@Citrate transporter protein, putative, expressed -
3 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
4 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
5 Sobic.001G441200 translocase of chloroplast 34, putative, expressed -
6 Sobic.006G281066 - -
7 Sobic.005G022000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Mpv17 / PMP22 family domain containing protein, expressed K13347: PXMP2, peroxisomal membrane protein 2
8 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
9 Sobic.002G363500 RNA methyltransferase, TrmH family protein, putative, expressed -
10 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
11 Sobic.008G186500 FGGY family of carbohydrate kinases, putative, expressed K00854: xylB, xylulokinase
12 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
13 Sobic.004G109000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chalcone isomerase 3, putative, expressed -
14 Sobic.001G543700 palmitoyl-protein thioesterase 1 precursor, putative, expressed K01074: palmitoyl-protein thioesterase
15 Sobic.009G124000 mesophyll envelope protein(PubMedID : 26976818)@expressed protein -
16 Sobic.010G123300 expressed protein -
17 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
18 Sobic.010G134500 exonuclease, putative, expressed -
19 Sobic.007G026200 heat shock protein DnaJ, putative, expressed -
20 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -


Gene co-expression network
sample Sobic003G165800 Sobic003G165800 Sobic001G104300 Sobic001G104300 Sobic003G165800--Sobic001G104300 Sobic002G141900 Sobic002G141900 Sobic003G165800--Sobic002G141900 Sobic003G420900 Sobic003G420900 Sobic003G165800--Sobic003G420900 Sobic001G021500 Sobic001G021500 Sobic003G165800--Sobic001G021500 Sobic001G441200 Sobic001G441200 Sobic003G165800--Sobic001G441200 Sobic006G281066 Sobic006G281066 Sobic003G165800--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic003G165800--Sobic005G022000 Sobic009G055900 Sobic009G055900 Sobic003G165800--Sobic009G055900 Sobic002G363500 Sobic002G363500 Sobic003G165800--Sobic002G363500 Sobic002G078000 Sobic002G078000 Sobic001G104300--Sobic002G078000 Sobic001G104300--Sobic006G281066 Sobic001G104300--Sobic005G022000 Sobic001G104300--Sobic003G165800 Sobic004G070800 Sobic004G070800 Sobic001G104300--Sobic004G070800 Sobic001G013900 Sobic001G013900 Sobic001G104300--Sobic001G013900 Sobic003G333700 Sobic003G333700 Sobic001G104300--Sobic003G333700 Sobic010G134500 Sobic010G134500 Sobic001G104300--Sobic010G134500 Sobic004G109000 Sobic004G109000 Sobic001G104300--Sobic004G109000 Sobic002G272400 Sobic002G272400 Sobic002G141900--Sobic002G272400 Sobic002G141900--Sobic006G281066 Sobic003G267000 Sobic003G267000 Sobic002G141900--Sobic003G267000 Sobic010G027200 Sobic010G027200 Sobic002G141900--Sobic010G027200 Sobic002G141900--Sobic003G165800 Sobic006G208400 Sobic006G208400 Sobic002G141900--Sobic006G208400 Sobic002G141900--Sobic001G104300 Sobic002G140000 Sobic002G140000 Sobic002G141900--Sobic002G140000 Sobic001G027100 Sobic001G027100 Sobic002G141900--Sobic001G027100 Sobic001G376700 Sobic001G376700 Sobic003G420900--Sobic001G376700 Sobic004G296800 Sobic004G296800 Sobic003G420900--Sobic004G296800 Sobic003G420900--Sobic003G165800 Sobic009G231100 Sobic009G231100 Sobic003G420900--Sobic009G231100 Sobic002G333100 Sobic002G333100 Sobic003G420900--Sobic002G333100 Sobic004G275600 Sobic004G275600 Sobic003G420900--Sobic004G275600 Sobic003G420900--Sobic010G134500 Sobic003G261200 Sobic003G261200 Sobic003G420900--Sobic003G261200 Sobic001G543700 Sobic001G543700 Sobic003G420900--Sobic001G543700 Sobic004G243400 Sobic004G243400 Sobic001G021500--Sobic004G243400 Sobic002G377300 Sobic002G377300 Sobic001G021500--Sobic002G377300 Sobic001G021500--Sobic009G055900 Sobic001G021500--Sobic003G165800 Sobic008G190500 Sobic008G190500 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic010G123300 Sobic010G123300 Sobic001G021500--Sobic010G123300 Sobic009G144200 Sobic009G144200 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900 Sobic006G232400 Sobic006G232400 Sobic001G441200--Sobic006G232400 Sobic001G441200--Sobic003G165800 Sobic001G441200--Sobic006G281066 Sobic007G026200 Sobic007G026200 Sobic001G441200--Sobic007G026200 Sobic004G214400 Sobic004G214400 Sobic001G441200--Sobic004G214400 Sobic002G189600 Sobic002G189600 Sobic001G441200--Sobic002G189600 Sobic001G441200--Sobic002G141900 Sobic001G441200--Sobic004G070800 Sobic001G441200--Sobic002G140000 Sobic006G281066--Sobic004G214400 Sobic006G281066--Sobic001G104300 Sobic006G281066--Sobic001G543700 Sobic006G281066--Sobic002G363500 Sobic001G395300 Sobic001G395300 Sobic006G281066--Sobic001G395300 Sobic003G236300 Sobic003G236300 Sobic006G281066--Sobic003G236300 Sobic006G281066--Sobic010G027200 Sobic006G281066--Sobic002G140000 Sobic001G321400 Sobic001G321400 Sobic006G281066--Sobic001G321400 Sobic005G022000--Sobic002G078000 Sobic005G022000--Sobic001G104300 Sobic005G022000--Sobic002G363500 Sobic005G022000--Sobic006G281066 Sobic006G114300 Sobic006G114300 Sobic005G022000--Sobic006G114300 Sobic005G022000--Sobic007G026200 Sobic002G360200 Sobic002G360200 Sobic005G022000--Sobic002G360200 Sobic007G166600 Sobic007G166600 Sobic005G022000--Sobic007G166600 Sobic001G389500 Sobic001G389500 Sobic005G022000--Sobic001G389500 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic001G405000 Sobic001G405000 Sobic009G055900--Sobic001G405000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic002G363500--Sobic006G281066 Sobic002G363500--Sobic005G022000 Sobic002G363500--Sobic001G395300 Sobic001G437200 Sobic001G437200 Sobic002G363500--Sobic001G437200 Sobic002G363500--Sobic001G104300 Sobic003G298400 Sobic003G298400 Sobic002G363500--Sobic003G298400 Sobic002G363500--Sobic010G134500 Sobic002G363500--Sobic003G165800 Sobic006G237100 Sobic006G237100 Sobic002G363500--Sobic006G237100
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.