Gene annotation
Transcriptome id Sobic.010G123300.1
Synonym Sb10g010840
Functional annotation expressed protein
UniProt C5Z913
Pfam PF01594
Panther DB PTHR21716 PTHR21716:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G55960 : -
RAP-DB (Rice) LOC_Os06g19390.1 : expressed protein
MaizeGDB (Corn) Zm00025a050518
Brachypodium -
Barley HORVU7Hr1G044240.1
Wheat TraesCS7D02G220100 , TraesCS7B02G125300 , TraesCS7A02G218400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G021500 CESA5 - cellulose synthase, expressed K10999: cellulose synthase A
2 Sobic.003G165800 UDP-N-acetylglucosamine--N-acetylmuramyl-pyrophosphor yl-undecaprenol N-acetylglucosamine transferase, putative, expressed K02563: UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
3 Sobic.010G059200 cystathionine gamma-synthase, putative, expressed K01760: cysteine-S-conjugate beta-lyase
4 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
5 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
6 Sobic.004G203900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
7 Sobic.007G050600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CSLF6 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed -
8 Sobic.010G050900 harpin-induced protein, putative, expressed -
9 Sobic.004G296800 3-isopropylmalate dehydratase small subunit 2, putative, expressed K01704: leuD, 3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit
10 Sobic.002G377300 CAMK_CAMK_like.35 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
11 Sobic.001G408800 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.010G258500 arogenate dehydrogenase 1, chloroplast precursor, putative, expressed -
13 Sobic.007G166600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@copper/zinc superoxide dismutase, putative, expressed K04565: superoxide dismutase, Cu-Zn family
14 Sobic.003G420900 S-formylglutathione hydrolase, putative, expressed K01070: frmB, ESD, S-formylglutathione hydrolase
15 Sobic.003G400600 BHLH transcription factor, putative, expressed -
16 Sobic.009G125900 expressed protein -
17 Sobic.009G144200 glycosyl transferase, putative, expressed -
18 Sobic.001G460000 glycosyl transferase 8 domain containing protein, putative, expressed K13648: alpha-1,4-galacturonosyltransferase
19 Sobic.001G376700 blue-light photoreceptor PHR2, putative, expressed -
20 Sobic.002G388600 pectinacetylesterase domain containing protein, expressed -


Gene co-expression network
sample Sobic010G123300 Sobic010G123300 Sobic001G021500 Sobic001G021500 Sobic010G123300--Sobic001G021500 Sobic003G165800 Sobic003G165800 Sobic010G123300--Sobic003G165800 Sobic010G059200 Sobic010G059200 Sobic010G123300--Sobic010G059200 Sobic009G055900 Sobic009G055900 Sobic010G123300--Sobic009G055900 Sobic002G118700 Sobic002G118700 Sobic010G123300--Sobic002G118700 Sobic004G203900 Sobic004G203900 Sobic010G123300--Sobic004G203900 Sobic007G050600 Sobic007G050600 Sobic010G123300--Sobic007G050600 Sobic010G050900 Sobic010G050900 Sobic010G123300--Sobic010G050900 Sobic004G296800 Sobic004G296800 Sobic010G123300--Sobic004G296800 Sobic004G243400 Sobic004G243400 Sobic001G021500--Sobic004G243400 Sobic002G377300 Sobic002G377300 Sobic001G021500--Sobic002G377300 Sobic001G021500--Sobic009G055900 Sobic001G021500--Sobic003G165800 Sobic008G190500 Sobic008G190500 Sobic001G021500--Sobic008G190500 Sobic003G347300 Sobic003G347300 Sobic001G021500--Sobic003G347300 Sobic001G021500--Sobic010G123300 Sobic009G144200 Sobic009G144200 Sobic001G021500--Sobic009G144200 Sobic007G210900 Sobic007G210900 Sobic001G021500--Sobic007G210900 Sobic001G104300 Sobic001G104300 Sobic003G165800--Sobic001G104300 Sobic002G141900 Sobic002G141900 Sobic003G165800--Sobic002G141900 Sobic003G420900 Sobic003G420900 Sobic003G165800--Sobic003G420900 Sobic003G165800--Sobic001G021500 Sobic001G441200 Sobic001G441200 Sobic003G165800--Sobic001G441200 Sobic006G281066 Sobic006G281066 Sobic003G165800--Sobic006G281066 Sobic005G022000 Sobic005G022000 Sobic003G165800--Sobic005G022000 Sobic003G165800--Sobic009G055900 Sobic002G363500 Sobic002G363500 Sobic003G165800--Sobic002G363500 Sobic009G124000 Sobic009G124000 Sobic010G059200--Sobic009G124000 Sobic010G059200--Sobic003G165800 Sobic004G124100 Sobic004G124100 Sobic010G059200--Sobic004G124100 Sobic010G059200--Sobic003G420900 Sobic010G059200--Sobic010G123300 Sobic002G301200 Sobic002G301200 Sobic010G059200--Sobic002G301200 Sobic010G059200--Sobic004G296800 Sobic001G376700 Sobic001G376700 Sobic010G059200--Sobic001G376700 Sobic001G408800 Sobic001G408800 Sobic010G059200--Sobic001G408800 Sobic008G143600 Sobic008G143600 Sobic009G055900--Sobic008G143600 Sobic009G055900--Sobic002G377300 Sobic001G405000 Sobic001G405000 Sobic009G055900--Sobic001G405000 Sobic004G109000 Sobic004G109000 Sobic009G055900--Sobic004G109000 Sobic009G059100 Sobic009G059100 Sobic009G055900--Sobic009G059100 Sobic006G001400 Sobic006G001400 Sobic009G055900--Sobic006G001400 Sobic006G060500 Sobic006G060500 Sobic009G055900--Sobic006G060500 Sobic009G055900--Sobic004G243400 Sobic001G389600 Sobic001G389600 Sobic009G055900--Sobic001G389600 Sobic009G063400 Sobic009G063400 Sobic002G118700--Sobic009G063400 Sobic009G125900 Sobic009G125900 Sobic002G118700--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic002G118700--Sobic002G075500 Sobic001G099100 Sobic001G099100 Sobic002G118700--Sobic001G099100 Sobic004G051300 Sobic004G051300 Sobic002G118700--Sobic004G051300 Sobic009G026101 Sobic009G026101 Sobic002G118700--Sobic009G026101 Sobic010G090500 Sobic010G090500 Sobic002G118700--Sobic010G090500 Sobic007G180900 Sobic007G180900 Sobic002G118700--Sobic007G180900 Sobic002G276600 Sobic002G276600 Sobic002G118700--Sobic002G276600 Sobic003G071400 Sobic003G071400 Sobic004G203900--Sobic003G071400 Sobic004G265600 Sobic004G265600 Sobic004G203900--Sobic004G265600 Sobic003G151300 Sobic003G151300 Sobic004G203900--Sobic003G151300 Sobic009G032600 Sobic009G032600 Sobic004G203900--Sobic009G032600 Sobic006G038200 Sobic006G038200 Sobic004G203900--Sobic006G038200 Sobic008G000100 Sobic008G000100 Sobic004G203900--Sobic008G000100 Sobic002G347400 Sobic002G347400 Sobic004G203900--Sobic002G347400 Sobic003G098600 Sobic003G098600 Sobic004G203900--Sobic003G098600 Sobic004G168700 Sobic004G168700 Sobic004G203900--Sobic004G168700 Sobic001G460000 Sobic001G460000 Sobic007G050600--Sobic001G460000 Sobic001G334900 Sobic001G334900 Sobic007G050600--Sobic001G334900 Sobic004G295700 Sobic004G295700 Sobic007G050600--Sobic004G295700 Sobic007G050600--Sobic009G063400 Sobic004G296200 Sobic004G296200 Sobic007G050600--Sobic004G296200 Sobic009G232200 Sobic009G232200 Sobic007G050600--Sobic009G232200 Sobic001G012600 Sobic001G012600 Sobic007G050600--Sobic001G012600 Sobic004G257700 Sobic004G257700 Sobic007G050600--Sobic004G257700 Sobic010G228100 Sobic010G228100 Sobic007G050600--Sobic010G228100 Sobic006G267700 Sobic006G267700 Sobic010G050900--Sobic006G267700 Sobic010G050900--Sobic001G099100 Sobic002G270700 Sobic002G270700 Sobic010G050900--Sobic002G270700 Sobic003G353400 Sobic003G353400 Sobic010G050900--Sobic003G353400 Sobic010G050900--Sobic002G118700 Sobic004G272200 Sobic004G272200 Sobic010G050900--Sobic004G272200 Sobic010G050900--Sobic004G051300 Sobic009G195900 Sobic009G195900 Sobic010G050900--Sobic009G195900 Sobic002G124700 Sobic002G124700 Sobic010G050900--Sobic002G124700 Sobic004G296800--Sobic001G376700 Sobic001G543700 Sobic001G543700 Sobic004G296800--Sobic001G543700 Sobic004G044200 Sobic004G044200 Sobic004G296800--Sobic004G044200 Sobic004G296800--Sobic003G420900 Sobic002G207900 Sobic002G207900 Sobic004G296800--Sobic002G207900 Sobic007G026200 Sobic007G026200 Sobic004G296800--Sobic007G026200 Sobic008G123600 Sobic008G123600 Sobic004G296800--Sobic008G123600 Sobic001G541300 Sobic001G541300 Sobic004G296800--Sobic001G541300 Sobic005G218201 Sobic005G218201 Sobic004G296800--Sobic005G218201
Octagon: transcription factors


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