Gene annotation
Transcriptome id Sobic.003G400600.1
Synonym Sb03g043690
Functional annotation BHLH transcription factor, putative, expressed
UniProt C5XG71
Pfam PF00010
Panther DB PTHR12565 PTHR12565:SF170
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07340 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os01g68700.2 : BHLH transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a039350 , Zm00025a026304
Brachypodium KQK11183
Barley HORVU3Hr1G093310.5 , HORVU3Hr1G093310.4 , HORVU3Hr1G093310.6 , HORVU3Hr1G093310.1 , HORVU3Hr1G093310.3 , HORVU3Hr1G093310.2 , HORVU1Hr1G084740.1
Wheat TraesCS3D02G417300 , TraesCS3D02G417300 , TraesCS3D02G417300 , TraesCS3A02G421400 , TraesCS3A02G421400 , TraesCS3B02G457400
Populus -


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cDNA sequences
Sobic.003G400600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G451800 atypical receptor-like kinase MARK, putative, expressed -
2 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
3 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
4 Sobic.008G039800 rhoGAP domain containing protein, expressed -
5 Sobic.002G142500 expressed protein -
6 Sobic.002G276600 endoglucanase, putative, expressed -
7 Sobic.003G017500 TTL1, putative, expressed -
8 Sobic.002G246000 expressed protein -
9 Sobic.002G045200 protein kinase, putative, expressed -
10 Sobic.006G182500 WD-40 repeat family protein, putative, expressed -
11 Sobic.004G243800 HEAT repeat family protein, putative, expressed -
12 Sobic.010G181500 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
13 Sobic.001G285200 protein transport protein-related, putative, expressed -
14 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
15 Sobic.001G157100 BTBN17 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed -
16 Sobic.009G055900 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
17 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
18 Sobic.002G162000 - -
19 Sobic.010G165100 expressed protein -
20 Sobic.006G274866 - -


Gene co-expression network
sample Sobic003G400600 Sobic003G400600 Sobic001G451800 Sobic001G451800 Sobic003G400600--Sobic001G451800 Sobic003G277200 Sobic003G277200 Sobic003G400600--Sobic003G277200 Sobic001G437500 Sobic001G437500 Sobic003G400600--Sobic001G437500 Sobic008G039800 Sobic008G039800 Sobic003G400600--Sobic008G039800 Sobic002G142500 Sobic002G142500 Sobic003G400600--Sobic002G142500 Sobic002G276600 Sobic002G276600 Sobic003G400600--Sobic002G276600 Sobic003G017500 Sobic003G017500 Sobic003G400600--Sobic003G017500 Sobic002G246000 Sobic002G246000 Sobic003G400600--Sobic002G246000 Sobic002G045200 Sobic002G045200 Sobic003G400600--Sobic002G045200 Sobic001G253900 Sobic001G253900 Sobic001G451800--Sobic001G253900 Sobic001G451800--Sobic003G400600 Sobic007G113900 Sobic007G113900 Sobic001G451800--Sobic007G113900 Sobic003G420100 Sobic003G420100 Sobic001G451800--Sobic003G420100 Sobic008G156900 Sobic008G156900 Sobic001G451800--Sobic008G156900 Sobic001G451800--Sobic003G277200 Sobic010G104400 Sobic010G104400 Sobic001G451800--Sobic010G104400 Sobic006G214000 Sobic006G214000 Sobic001G451800--Sobic006G214000 Sobic010G181500 Sobic010G181500 Sobic001G451800--Sobic010G181500 Sobic002G419200 Sobic002G419200 Sobic003G277200--Sobic002G419200 Sobic003G338200 Sobic003G338200 Sobic003G277200--Sobic003G338200 Sobic003G116100 Sobic003G116100 Sobic003G277200--Sobic003G116100 Sobic003G277200--Sobic008G039800 Sobic010G216600 Sobic010G216600 Sobic003G277200--Sobic010G216600 Sobic001G345200 Sobic001G345200 Sobic003G277200--Sobic001G345200 Sobic001G285200 Sobic001G285200 Sobic003G277200--Sobic001G285200 Sobic007G012800 Sobic007G012800 Sobic003G277200--Sobic007G012800 Sobic001G037400 Sobic001G037400 Sobic003G277200--Sobic001G037400 Sobic001G196000 Sobic001G196000 Sobic001G437500--Sobic001G196000 Sobic004G243800 Sobic004G243800 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic001G437500--Sobic009G206500 Sobic007G139500 Sobic007G139500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic001G437500--Sobic002G276600 Sobic008G039800--Sobic003G277200 Sobic008G039800--Sobic001G037400 Sobic009G242501 Sobic009G242501 Sobic008G039800--Sobic009G242501 Sobic008G039800--Sobic001G285200 Sobic008G039800--Sobic010G216600 Sobic009G211800 Sobic009G211800 Sobic008G039800--Sobic009G211800 Sobic008G096200 Sobic008G096200 Sobic008G039800--Sobic008G096200 Sobic003G013000 Sobic003G013000 Sobic008G039800--Sobic003G013000 Sobic008G039800--Sobic001G196000 Sobic006G274866 Sobic006G274866 Sobic002G142500--Sobic006G274866 Sobic006G257200 Sobic006G257200 Sobic002G142500--Sobic006G257200 Sobic001G389600 Sobic001G389600 Sobic002G142500--Sobic001G389600 Sobic010G165100 Sobic010G165100 Sobic002G142500--Sobic010G165100 Sobic002G311000 Sobic002G311000 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G142500--Sobic002G246000 Sobic006G241800 Sobic006G241800 Sobic002G142500--Sobic006G241800 Sobic002G276600--Sobic009G061000 Sobic002G276600--Sobic001G437500 Sobic001G099100 Sobic001G099100 Sobic002G276600--Sobic001G099100 Sobic008G174900 Sobic008G174900 Sobic002G276600--Sobic008G174900 Sobic002G276600--Sobic006G267500 Sobic002G276600--Sobic004G243800 Sobic009G026101 Sobic009G026101 Sobic002G276600--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G276600--Sobic004G051300 Sobic010G090500 Sobic010G090500 Sobic002G276600--Sobic010G090500 Sobic002G383100 Sobic002G383100 Sobic003G017500--Sobic002G383100 Sobic001G051300 Sobic001G051300 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic003G017500--Sobic001G437500 Sobic003G017500--Sobic007G139500 Sobic009G073400 Sobic009G073400 Sobic003G017500--Sobic009G073400 Sobic003G017500--Sobic009G206500 Sobic003G017500--Sobic001G159800 Sobic003G410600 Sobic003G410600 Sobic003G017500--Sobic003G410600 Sobic002G246000--Sobic010G165100 Sobic002G246000--Sobic001G389600 Sobic002G246000--Sobic002G045200 Sobic002G246000--Sobic002G142500 Sobic006G032800 Sobic006G032800 Sobic002G246000--Sobic006G032800 Sobic010G107200 Sobic010G107200 Sobic002G246000--Sobic010G107200 Sobic002G246000--Sobic002G311000 Sobic002G403000 Sobic002G403000 Sobic002G246000--Sobic002G403000 Sobic002G246000--Sobic003G277200 Sobic002G045200--Sobic001G389600 Sobic010G211800 Sobic010G211800 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500
Octagon: transcription factors


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