Gene annotation
Transcriptome id Sobic.004G243800.1
Synonym Sb04g028430
Functional annotation HEAT repeat family protein, putative, expressed
UniProt C5XZ71
Pfam -
Panther DB PTHR31355 PTHR31355:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G62580 : ARM repeat superfamily protein
RAP-DB (Rice) LOC_Os02g50640.1 : HEAT repeat family protein, putative, expressed
MaizeGDB (Corn) Zm00025a029037 , Zm00025a021983
Brachypodium KQK01998
Barley HORVU6Hr1G076760.1 , HORVU6Hr1G076760.2 , HORVU6Hr1G076760.3 , HORVU6Hr1G076760.4 , HORVU6Hr1G076760.5 , HORVU6Hr1G076760.6 , HORVU6Hr1G076760.7
Wheat TraesCS6D02G290800 , TraesCS6A02G311500 , TraesCS6B02G341700
Populus -


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cDNA sequences
Sobic.004G243800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G437500 plant protein of unknown function DUF869 domain containing protein, expressed -
2 Sobic.001G037400 expressed protein -
3 Sobic.001G196000 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
4 Sobic.010G165100 expressed protein -
5 Sobic.002G276600 endoglucanase, putative, expressed -
6 Sobic.009G211800 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
7 Sobic.008G174900 IQ calmodulin-binding motif domain containing protein, expressed -
8 Sobic.002G045200 protein kinase, putative, expressed -
9 Sobic.002G142500 expressed protein -
10 Sobic.008G039800 rhoGAP domain containing protein, expressed -
11 Sobic.006G081000 protein kinase domain containing protein, expressed K04730: interleukin-1 receptor-associated kinase 1
12 Sobic.003G277200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@IQ calmodulin-binding motif family protein, putative, expressed -
13 Sobic.010G211800 TKL_IRAK_CrRLK1L-1.14 - The CrRLK1L-1 subfamily has homology to the CrRLK1L homolog, expressed -
14 Sobic.001G023500 expressed protein -
15 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
16 Sobic.002G320600 HEAT repeat family protein, putative, expressed -
17 Sobic.001G201000 protein transport protein-related, putative, expressed -
18 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
19 Sobic.001G285200 protein transport protein-related, putative, expressed -
20 Sobic.002G246000 expressed protein -


Gene co-expression network
sample Sobic004G243800 Sobic004G243800 Sobic001G437500 Sobic001G437500 Sobic004G243800--Sobic001G437500 Sobic001G037400 Sobic001G037400 Sobic004G243800--Sobic001G037400 Sobic001G196000 Sobic001G196000 Sobic004G243800--Sobic001G196000 Sobic010G165100 Sobic010G165100 Sobic004G243800--Sobic010G165100 Sobic002G276600 Sobic002G276600 Sobic004G243800--Sobic002G276600 Sobic009G211800 Sobic009G211800 Sobic004G243800--Sobic009G211800 Sobic008G174900 Sobic008G174900 Sobic004G243800--Sobic008G174900 Sobic002G045200 Sobic002G045200 Sobic004G243800--Sobic002G045200 Sobic002G142500 Sobic002G142500 Sobic004G243800--Sobic002G142500 Sobic001G437500--Sobic001G196000 Sobic001G437500--Sobic004G243800 Sobic004G274800 Sobic004G274800 Sobic001G437500--Sobic004G274800 Sobic009G206500 Sobic009G206500 Sobic001G437500--Sobic009G206500 Sobic007G139500 Sobic007G139500 Sobic001G437500--Sobic007G139500 Sobic001G159800 Sobic001G159800 Sobic001G437500--Sobic001G159800 Sobic009G061000 Sobic009G061000 Sobic001G437500--Sobic009G061000 Sobic006G267500 Sobic006G267500 Sobic001G437500--Sobic006G267500 Sobic001G437500--Sobic002G276600 Sobic001G037400--Sobic004G243800 Sobic008G039800 Sobic008G039800 Sobic001G037400--Sobic008G039800 Sobic003G277200 Sobic003G277200 Sobic001G037400--Sobic003G277200 Sobic003G419600 Sobic003G419600 Sobic001G037400--Sobic003G419600 Sobic005G110600 Sobic005G110600 Sobic001G037400--Sobic005G110600 Sobic004G288500 Sobic004G288500 Sobic001G037400--Sobic004G288500 Sobic001G037400--Sobic001G196000 Sobic003G006100 Sobic003G006100 Sobic001G037400--Sobic003G006100 Sobic001G037400--Sobic009G211800 Sobic001G196000--Sobic001G437500 Sobic001G196000--Sobic007G139500 Sobic001G196000--Sobic004G243800 Sobic001G196000--Sobic009G206500 Sobic001G196000--Sobic004G274800 Sobic006G081000 Sobic006G081000 Sobic001G196000--Sobic006G081000 Sobic007G173000 Sobic007G173000 Sobic001G196000--Sobic007G173000 Sobic008G174966 Sobic008G174966 Sobic001G196000--Sobic008G174966 Sobic001G196000--Sobic001G159800 Sobic002G246000 Sobic002G246000 Sobic010G165100--Sobic002G246000 Sobic001G389600 Sobic001G389600 Sobic010G165100--Sobic001G389600 Sobic010G165100--Sobic002G142500 Sobic010G165100--Sobic002G045200 Sobic006G274866 Sobic006G274866 Sobic010G165100--Sobic006G274866 Sobic002G403000 Sobic002G403000 Sobic010G165100--Sobic002G403000 Sobic006G032800 Sobic006G032800 Sobic010G165100--Sobic006G032800 Sobic002G311000 Sobic002G311000 Sobic010G165100--Sobic002G311000 Sobic010G165100--Sobic004G243800 Sobic002G276600--Sobic009G061000 Sobic002G276600--Sobic001G437500 Sobic001G099100 Sobic001G099100 Sobic002G276600--Sobic001G099100 Sobic002G276600--Sobic008G174900 Sobic002G276600--Sobic006G267500 Sobic002G276600--Sobic004G243800 Sobic009G026101 Sobic009G026101 Sobic002G276600--Sobic009G026101 Sobic004G051300 Sobic004G051300 Sobic002G276600--Sobic004G051300 Sobic010G090500 Sobic010G090500 Sobic002G276600--Sobic010G090500 Sobic009G211800--Sobic004G243800 Sobic009G211800--Sobic008G039800 Sobic009G211800--Sobic003G277200 Sobic009G211800--Sobic001G037400 Sobic009G211800--Sobic002G045200 Sobic004G168700 Sobic004G168700 Sobic009G211800--Sobic004G168700 Sobic001G201000 Sobic001G201000 Sobic009G211800--Sobic001G201000 Sobic007G107950 Sobic007G107950 Sobic009G211800--Sobic007G107950 Sobic010G211800 Sobic010G211800 Sobic009G211800--Sobic010G211800 Sobic008G174900--Sobic002G276600 Sobic008G174900--Sobic001G437500 Sobic008G174900--Sobic004G243800 Sobic008G174900--Sobic006G267500 Sobic008G174900--Sobic010G090500 Sobic008G174900--Sobic009G026101 Sobic009G226900 Sobic009G226900 Sobic008G174900--Sobic009G226900 Sobic010G096100 Sobic010G096100 Sobic008G174900--Sobic010G096100 Sobic008G174900--Sobic009G206500 Sobic002G045200--Sobic001G389600 Sobic002G045200--Sobic010G211800 Sobic001G074100 Sobic001G074100 Sobic002G045200--Sobic001G074100 Sobic002G045200--Sobic010G165100 Sobic006G241800 Sobic006G241800 Sobic002G045200--Sobic006G241800 Sobic001G522300 Sobic001G522300 Sobic002G045200--Sobic001G522300 Sobic002G362700 Sobic002G362700 Sobic002G045200--Sobic002G362700 Sobic002G045200--Sobic002G311000 Sobic002G045200--Sobic002G142500 Sobic002G142500--Sobic006G274866 Sobic006G257200 Sobic006G257200 Sobic002G142500--Sobic006G257200 Sobic002G142500--Sobic001G389600 Sobic002G142500--Sobic010G165100 Sobic002G142500--Sobic002G311000 Sobic009G235700 Sobic009G235700 Sobic002G142500--Sobic009G235700 Sobic002G142500--Sobic002G045200 Sobic002G142500--Sobic002G246000 Sobic002G142500--Sobic006G241800
Octagon: transcription factors


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