Gene annotation
Transcriptome id Sobic.004G308100.1
Synonym Sb04g034060
Functional annotation uncharacterized Cys-rich domain containing protein, putative, expressed
UniProt C5XST8
Pfam PF04749
Panther DB PTHR15907 PTHR15907:SF44
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G35525 : PLAC8 family protein
RAP-DB (Rice) LOC_Os02g52550.1 : uncharacterized Cys-rich domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a033101
Brachypodium -
Barley HORVU6Hr1G078660.1 , HORVU6Hr1G078660.5 , HORVU6Hr1G078660.3 , HORVU6Hr1G078660.2 , HORVU6Hr1G078660.6 , HORVU6Hr1G078660.4
Wheat TraesCS6A02G321000 , TraesCS6B02G351700 , TraesCS6D02G300700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G287800 expressed protein -
2 Sobic.003G013000 inactive receptor kinase At2g26730 precursor, putative, expressed -
3 Sobic.001G487200 zinc finger, C3HC4 type domain containing protein, expressed K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins
4 Sobic.002G370400 expressed protein -
5 Sobic.002G161700 Myb-like DNA-binding domain containing protein, putative, expressed -
6 Sobic.006G254500 IQ calmodulin-binding motif family protein, putative, expressed -
7 Sobic.004G333600 heparanase-like protein precursor, putative, expressed K07964: heparanase
8 Sobic.006G272500 "PKc_like super family, protein kjinases, catalytic domain"(PubMedID : 29491869)@expressed protein -
9 Sobic.007G166800 domain of unknown function DUF966 domain containing protein, expressed -
10 Sobic.010G010900 expressed protein -
11 Sobic.001G285200 protein transport protein-related, putative, expressed -
12 Sobic.002G162000 - -
13 Sobic.003G410600 exostosin family domain containing protein, expressed -
14 Sobic.006G191700 expansin precursor, putative, expressed -
15 Sobic.001G463800 expressed protein -
16 Sobic.009G242501 - -
17 Sobic.001G113800 receptor protein kinase TMK1 precursor, putative, expressed -
18 Sobic.004G331200 expressed protein -
19 Sobic.009G248900 expressed protein -
20 Sobic.001G528600 remorin family protein, putative, expressed -


Gene co-expression network
sample Sobic004G308100 Sobic004G308100 Sobic004G287800 Sobic004G287800 Sobic004G308100--Sobic004G287800 Sobic003G013000 Sobic003G013000 Sobic004G308100--Sobic003G013000 Sobic001G487200 Sobic001G487200 Sobic004G308100--Sobic001G487200 Sobic002G370400 Sobic002G370400 Sobic004G308100--Sobic002G370400 Sobic002G161700 Sobic002G161700 Sobic004G308100--Sobic002G161700 Sobic006G254500 Sobic006G254500 Sobic004G308100--Sobic006G254500 Sobic004G333600 Sobic004G333600 Sobic004G308100--Sobic004G333600 Sobic006G272500 Sobic006G272500 Sobic004G308100--Sobic006G272500 Sobic007G166800 Sobic007G166800 Sobic004G308100--Sobic007G166800 Sobic004G287800--Sobic004G308100 Sobic007G132900 Sobic007G132900 Sobic004G287800--Sobic007G132900 Sobic002G007200 Sobic002G007200 Sobic004G287800--Sobic002G007200 Sobic008G035900 Sobic008G035900 Sobic004G287800--Sobic008G035900 Sobic004G287800--Sobic006G254500 Sobic002G353200 Sobic002G353200 Sobic004G287800--Sobic002G353200 Sobic009G123500 Sobic009G123500 Sobic004G287800--Sobic009G123500 Sobic009G064900 Sobic009G064900 Sobic004G287800--Sobic009G064900 Sobic004G331200 Sobic004G331200 Sobic004G287800--Sobic004G331200 Sobic004G257600 Sobic004G257600 Sobic003G013000--Sobic004G257600 Sobic003G260700 Sobic003G260700 Sobic003G013000--Sobic003G260700 Sobic003G410600 Sobic003G410600 Sobic003G013000--Sobic003G410600 Sobic007G168900 Sobic007G168900 Sobic003G013000--Sobic007G168900 Sobic003G444100 Sobic003G444100 Sobic003G013000--Sobic003G444100 Sobic001G177900 Sobic001G177900 Sobic003G013000--Sobic001G177900 Sobic006G144300 Sobic006G144300 Sobic003G013000--Sobic006G144300 Sobic003G102000 Sobic003G102000 Sobic003G013000--Sobic003G102000 Sobic003G314900 Sobic003G314900 Sobic003G013000--Sobic003G314900 Sobic004G315700 Sobic004G315700 Sobic001G487200--Sobic004G315700 Sobic009G212100 Sobic009G212100 Sobic001G487200--Sobic009G212100 Sobic001G369800 Sobic001G369800 Sobic001G487200--Sobic001G369800 Sobic001G231200 Sobic001G231200 Sobic001G487200--Sobic001G231200 Sobic001G487200--Sobic002G370400 Sobic003G226700 Sobic003G226700 Sobic001G487200--Sobic003G226700 Sobic001G540700 Sobic001G540700 Sobic001G487200--Sobic001G540700 Sobic001G296800 Sobic001G296800 Sobic001G487200--Sobic001G296800 Sobic007G084200 Sobic007G084200 Sobic001G487200--Sobic007G084200 Sobic002G370400--Sobic001G487200 Sobic002G370400--Sobic001G231200 Sobic002G370400--Sobic004G315700 Sobic002G370400--Sobic006G272500 Sobic002G370400--Sobic009G212100 Sobic002G370400--Sobic001G296800 Sobic009G124800 Sobic009G124800 Sobic002G370400--Sobic009G124800 Sobic003G153900 Sobic003G153900 Sobic002G370400--Sobic003G153900 Sobic010G211800 Sobic010G211800 Sobic002G370400--Sobic010G211800 Sobic002G393200 Sobic002G393200 Sobic002G161700--Sobic002G393200 Sobic009G206500 Sobic009G206500 Sobic002G161700--Sobic009G206500 Sobic002G161700--Sobic004G308100 Sobic002G161700--Sobic007G166800 Sobic009G151700 Sobic009G151700 Sobic002G161700--Sobic009G151700 Sobic009G061000 Sobic009G061000 Sobic002G161700--Sobic009G061000 Sobic002G161700--Sobic003G013000 Sobic002G319200 Sobic002G319200 Sobic002G161700--Sobic002G319200 Sobic002G161700--Sobic006G254500 Sobic006G267500 Sobic006G267500 Sobic006G254500--Sobic006G267500 Sobic006G254500--Sobic009G212100 Sobic006G254500--Sobic004G315700 Sobic006G254500--Sobic002G393200 Sobic006G254500--Sobic007G166800 Sobic001G285200 Sobic001G285200 Sobic006G254500--Sobic001G285200 Sobic003G077500 Sobic003G077500 Sobic006G254500--Sobic003G077500 Sobic006G254500--Sobic001G487200 Sobic006G254500--Sobic009G206500 Sobic004G333600--Sobic004G308100 Sobic010G181500 Sobic010G181500 Sobic004G333600--Sobic010G181500 Sobic009G088700 Sobic009G088700 Sobic004G333600--Sobic009G088700 Sobic004G333600--Sobic001G487200 Sobic003G419700 Sobic003G419700 Sobic004G333600--Sobic003G419700 Sobic002G179150 Sobic002G179150 Sobic004G333600--Sobic002G179150 Sobic006G218600 Sobic006G218600 Sobic004G333600--Sobic006G218600 Sobic001G113800 Sobic001G113800 Sobic004G333600--Sobic001G113800 Sobic001G083500 Sobic001G083500 Sobic004G333600--Sobic001G083500 Sobic006G272500--Sobic009G124800 Sobic006G272500--Sobic001G285200 Sobic002G293700 Sobic002G293700 Sobic006G272500--Sobic002G293700 Sobic010G010900 Sobic010G010900 Sobic006G272500--Sobic010G010900 Sobic002G419200 Sobic002G419200 Sobic006G272500--Sobic002G419200 Sobic001G296100 Sobic001G296100 Sobic006G272500--Sobic001G296100 Sobic007G160300 Sobic007G160300 Sobic006G272500--Sobic007G160300 Sobic006G272500--Sobic002G370400 Sobic008G148500 Sobic008G148500 Sobic006G272500--Sobic008G148500 Sobic007G166800--Sobic001G487200 Sobic010G129700 Sobic010G129700 Sobic007G166800--Sobic010G129700 Sobic007G166800--Sobic006G254500 Sobic007G166800--Sobic001G285200 Sobic006G218900 Sobic006G218900 Sobic007G166800--Sobic006G218900 Sobic005G021900 Sobic005G021900 Sobic007G166800--Sobic005G021900 Sobic007G166800--Sobic001G231200 Sobic007G166800--Sobic004G315700 Sobic007G166800--Sobic001G540700
Octagon: transcription factors


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