Gene annotation
Transcriptome id Sobic.006G191700.1
Synonym EXPA13, ATEXPA13, ATEXP13, ATHEXPALPHA1.22, Sb06g026480, EXP13
Functional annotation expansin precursor, putative, expressed
UniProt C5YEK0
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G03220 : expansin A13
RAP-DB (Rice) LOC_Os04g49410.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a010068 , Zm00025a056689
Brachypodium PNT61709
Barley HORVU2Hr1G093690.1 , HORVU2Hr1G093690.2
Wheat TraesCS2A02G393700 , TraesCS2B02G411700 , TraesCS2D02G391600
Populus -


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cDNA sequences
Sobic.006G191700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G261549 - -
2 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
3 Sobic.006G278100 expressed protein -
4 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
5 Sobic.001G528600 remorin family protein, putative, expressed -
6 Sobic.007G094400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fiber protein Fb34, putative, expressed -
7 Sobic.008G096200 AGC_PVPK_like_kin82y.19 - ACG kinases include homologs to PKA, PKG and PKC, expressed -
8 Sobic.004G331200 expressed protein -
9 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
10 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
11 Sobic.006G102900 expressed protein -
12 Sobic.006G252466 - K14488: SAUR family protein
13 Sobic.009G088200 -(PubMedID : 26976818)@triosephosphate/phosphate translocator(PubMedID : 27016024)@phosphate/phosphate translocator, putative, expressed K15283: solute carrier family 35, member E1
14 Sobic.002G333800 CSLF8 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed K00770: 1,4-beta-D-xylan synthase
15 Sobic.003G135400 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
16 Sobic.001G103000 DNA binding protein, putative, expressed -
17 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
18 Sobic.004G308100 uncharacterized Cys-rich domain containing protein, putative, expressed -
19 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
20 Sobic.009G119700 acetyltransferase, GNAT family, putative, expressed -


Gene co-expression network
sample Sobic006G191700 Sobic006G191700 Sobic001G261549 Sobic001G261549 Sobic006G191700--Sobic001G261549 Sobic001G107200 Sobic001G107200 Sobic006G191700--Sobic001G107200 Sobic006G278100 Sobic006G278100 Sobic006G191700--Sobic006G278100 Sobic009G189200 Sobic009G189200 Sobic006G191700--Sobic009G189200 Sobic001G528600 Sobic001G528600 Sobic006G191700--Sobic001G528600 Sobic007G094400 Sobic007G094400 Sobic006G191700--Sobic007G094400 Sobic008G096200 Sobic008G096200 Sobic006G191700--Sobic008G096200 Sobic004G331200 Sobic004G331200 Sobic006G191700--Sobic004G331200 Sobic001G078600 Sobic001G078600 Sobic006G191700--Sobic001G078600 Sobic006G102900 Sobic006G102900 Sobic001G261549--Sobic006G102900 Sobic004G285900 Sobic004G285900 Sobic001G261549--Sobic004G285900 Sobic001G261549--Sobic009G189200 Sobic001G261549--Sobic006G191700 Sobic009G194900 Sobic009G194900 Sobic001G261549--Sobic009G194900 Sobic003G107200 Sobic003G107200 Sobic001G261549--Sobic003G107200 Sobic001G261549--Sobic001G078600 Sobic007G154500 Sobic007G154500 Sobic001G261549--Sobic007G154500 Sobic001G261549--Sobic008G096200 Sobic001G107200--Sobic001G528600 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic001G107200--Sobic006G278100 Sobic007G150800 Sobic007G150800 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic002G128800 Sobic002G128800 Sobic006G278100--Sobic002G128800 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic003G122200 Sobic003G122200 Sobic006G278100--Sobic003G122200 Sobic006G278100--Sobic006G191700 Sobic006G278100--Sobic001G261549 Sobic009G189200--Sobic006G102900 Sobic009G189200--Sobic001G261549 Sobic002G057500 Sobic002G057500 Sobic009G189200--Sobic002G057500 Sobic010G144900 Sobic010G144900 Sobic009G189200--Sobic010G144900 Sobic007G044400 Sobic007G044400 Sobic009G189200--Sobic007G044400 Sobic009G189200--Sobic004G285900 Sobic003G084300 Sobic003G084300 Sobic009G189200--Sobic003G084300 Sobic009G189200--Sobic003G122200 Sobic001G131600 Sobic001G131600 Sobic009G189200--Sobic001G131600 Sobic001G528600--Sobic001G078600 Sobic001G528600--Sobic001G107200 Sobic002G280700 Sobic002G280700 Sobic001G528600--Sobic002G280700 Sobic004G152200 Sobic004G152200 Sobic001G528600--Sobic004G152200 Sobic001G528600--Sobic006G191700 Sobic010G274000 Sobic010G274000 Sobic001G528600--Sobic010G274000 Sobic001G528600--Sobic004G331200 Sobic001G528600--Sobic005G047100 Sobic001G528600--Sobic006G102900 Sobic010G277300 Sobic010G277300 Sobic007G094400--Sobic010G277300 Sobic007G094400--Sobic001G107200 Sobic007G094400--Sobic006G191700 Sobic004G286700 Sobic004G286700 Sobic007G094400--Sobic004G286700 Sobic007G094400--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic007G094400--Sobic001G487200 Sobic007G094400--Sobic001G528600 Sobic001G051300 Sobic001G051300 Sobic007G094400--Sobic001G051300 Sobic006G207400 Sobic006G207400 Sobic007G094400--Sobic006G207400 Sobic001G231200 Sobic001G231200 Sobic008G096200--Sobic001G231200 Sobic010G105400 Sobic010G105400 Sobic008G096200--Sobic010G105400 Sobic010G211800 Sobic010G211800 Sobic008G096200--Sobic010G211800 Sobic002G394500 Sobic002G394500 Sobic008G096200--Sobic002G394500 Sobic008G096200--Sobic001G487200 Sobic005G144600 Sobic005G144600 Sobic008G096200--Sobic005G144600 Sobic003G420300 Sobic003G420300 Sobic008G096200--Sobic003G420300 Sobic002G426800 Sobic002G426800 Sobic008G096200--Sobic002G426800 Sobic008G096200--Sobic001G261549 Sobic001G289900 Sobic001G289900 Sobic004G331200--Sobic001G289900 Sobic004G331200--Sobic010G105400 Sobic004G331200--Sobic001G078600 Sobic004G331200--Sobic001G528600 Sobic004G331200--Sobic006G191700 Sobic001G468500 Sobic001G468500 Sobic004G331200--Sobic001G468500 Sobic003G444300 Sobic003G444300 Sobic004G331200--Sobic003G444300 Sobic001G255600 Sobic001G255600 Sobic004G331200--Sobic001G255600 Sobic004G331200--Sobic008G096200 Sobic001G078600--Sobic006G102900 Sobic001G078600--Sobic002G426800 Sobic001G078600--Sobic010G274000 Sobic001G078600--Sobic005G144600 Sobic004G197400 Sobic004G197400 Sobic001G078600--Sobic004G197400 Sobic001G078600--Sobic004G285900 Sobic006G116500 Sobic006G116500 Sobic001G078600--Sobic006G116500 Sobic001G078600--Sobic001G528600 Sobic001G078600--Sobic007G154500
Octagon: transcription factors


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