Gene annotation
Transcriptome id Sobic.001G107200.1
Synonym TUA6, Sb01g009570
Functional annotation tubulin/FtsZ domain containing protein, putative, expressed
UniProt A0A1B6QID3 , C5WM27
Pfam PF03953 PF00091
Panther DB PTHR11588 PTHR11588:SF101
NCBI CDD -
KEGG Orthology K07374; tubulin alpha
Gene Ontology GO:0003924; GTPase activity GO:0007017microtubule-based process GO:0005874microtubule


Orthologs (automatic annotation)
TAIR AT4G14960 : Tubulin/FtsZ family protein
RAP-DB (Rice) LOC_Os11g14220.1 : tubulin/FtsZ domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a016899 , Zm00025a007962 , Zm00025a016682
Brachypodium KQK13442 , KQK15574 , KQK12974
Barley HORVU1Hr1G081280.10 , HORVU5Hr1G098960.5 , HORVU5Hr1G098960.4 , HORVU5Hr1G098960.7 , HORVU5Hr1G098960.6 , HORVU1Hr1G081280.6 , HORVU1Hr1G081280.7 , HORVU5Hr1G098960.3 , HORVU5Hr1G098960.2 , HORVU1Hr1G081280.8 , HORVU1Hr1G081280.9 , HORVU5Hr1G098960.9 , HORVU5Hr1G098960.8 , HORVU2Hr1G037550.1 , HORVU2Hr1G037550.2 , HORVU4Hr1G009520.6 , HORVU4Hr1G009520.7 , HORVU4Hr1G009520.4 , HORVU4Hr1G009520.5 , HORVU4Hr1G009520.2 , HORVU4Hr1G009520.3 , HORVU4Hr1G009520.1 , HORVU5Hr1G098960.11 , HORVU5Hr1G098960.10 , HORVU5Hr1G098960.12 , HORVU2Hr1G037560.1 , HORVU2Hr1G037560.2 , HORVU1Hr1G081280.2 , HORVU1Hr1G081280.3 , HORVU1Hr1G081280.1 , HORVU5Hr1G098960.1 , HORVU1Hr1G081280.4 , HORVU1Hr1G081280.5
Wheat TraesCS4D02G057000 , TraesCS4A02G257800 , TraesCS1B02G364500 , TraesCS2A02G185500 , TraesCS2A02G185500 , TraesCS1D02G353100 , TraesCS1D02G353100 , TraesCS1D02G353100 , TraesCS1D02G353100 , TraesCS1D02G353100 , TraesCS4B02G056700 , TraesCS4B02G056700 , TraesCS5D02G417700 , TraesCS5A02G407800 , TraesCS1B02G364500 , TraesCS1B02G364500 , TraesCS1B02G364500 , TraesCS2B02G221800 , TraesCS2B02G221800 , TraesCS5B02G412700 , TraesCS1A02G350200 , TraesCS1A02G350200 , TraesCS1A02G350200 , TraesCS1A02G350200
Populus PNT20340 , PNT20342 , PNT20341


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cDNA sequences
Sobic.001G107200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G528600 remorin family protein, putative, expressed -
2 Sobic.006G191700 expansin precursor, putative, expressed -
3 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
4 Sobic.002G350400 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
5 Sobic.005G047100 actin, putative, expressed K10355: actin, other eukaryote
6 Sobic.007G094400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fiber protein Fb34, putative, expressed -
7 Sobic.003G250700 fasciclin domain containing protein, expressed -
8 Sobic.003G011100 reticulon domain containing protein, putative, expressed -
9 Sobic.006G278100 expressed protein -
10 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
11 Sobic.002G280300 expressed protein -
12 Sobic.006G252466 - K14488: SAUR family protein
13 Sobic.010G224900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
14 Sobic.001G078600 CAMK_CAMK_like_Aur_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K08850: aurora kinase, other
15 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
16 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
17 Sobic.001G470100 OsFBX77 - F-box domain containing protein, expressed -
18 Sobic.002G179150 - -
19 Sobic.001G261549 - -
20 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22


Gene co-expression network
sample Sobic001G107200 Sobic001G107200 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic001G078600 Sobic001G078600 Sobic001G528600--Sobic001G078600 Sobic001G528600--Sobic001G107200 Sobic002G280700 Sobic002G280700 Sobic001G528600--Sobic002G280700 Sobic004G152200 Sobic004G152200 Sobic001G528600--Sobic004G152200 Sobic001G528600--Sobic006G191700 Sobic010G274000 Sobic010G274000 Sobic001G528600--Sobic010G274000 Sobic004G331200 Sobic004G331200 Sobic001G528600--Sobic004G331200 Sobic001G528600--Sobic005G047100 Sobic006G102900 Sobic006G102900 Sobic001G528600--Sobic006G102900 Sobic001G261549 Sobic001G261549 Sobic006G191700--Sobic001G261549 Sobic006G191700--Sobic001G107200 Sobic006G191700--Sobic006G278100 Sobic009G189200 Sobic009G189200 Sobic006G191700--Sobic009G189200 Sobic006G191700--Sobic001G528600 Sobic006G191700--Sobic007G094400 Sobic008G096200 Sobic008G096200 Sobic006G191700--Sobic008G096200 Sobic006G191700--Sobic004G331200 Sobic006G191700--Sobic001G078600 Sobic001G038300 Sobic001G038300 Sobic001G107100--Sobic001G038300 Sobic001G107100--Sobic003G250700 Sobic002G396400 Sobic002G396400 Sobic001G107100--Sobic002G396400 Sobic001G107100--Sobic001G107200 Sobic002G333800 Sobic002G333800 Sobic001G107100--Sobic002G333800 Sobic002G252000 Sobic002G252000 Sobic001G107100--Sobic002G252000 Sobic001G107100--Sobic006G278100 Sobic001G156500 Sobic001G156500 Sobic001G107100--Sobic001G156500 Sobic007G090436 Sobic007G090436 Sobic001G107100--Sobic007G090436 Sobic002G350400--Sobic001G038300 Sobic002G350400--Sobic001G107200 Sobic002G350400--Sobic003G250700 Sobic003G122200 Sobic003G122200 Sobic002G350400--Sobic003G122200 Sobic001G475500 Sobic001G475500 Sobic002G350400--Sobic001G475500 Sobic002G350400--Sobic005G047100 Sobic002G350400--Sobic001G107100 Sobic001G131600 Sobic001G131600 Sobic002G350400--Sobic001G131600 Sobic002G350400--Sobic002G396400 Sobic004G297950 Sobic004G297950 Sobic005G047100--Sobic004G297950 Sobic003G247600 Sobic003G247600 Sobic005G047100--Sobic003G247600 Sobic007G225400 Sobic007G225400 Sobic005G047100--Sobic007G225400 Sobic004G170900 Sobic004G170900 Sobic005G047100--Sobic004G170900 Sobic001G521300 Sobic001G521300 Sobic005G047100--Sobic001G521300 Sobic003G321400 Sobic003G321400 Sobic005G047100--Sobic003G321400 Sobic004G170800 Sobic004G170800 Sobic005G047100--Sobic004G170800 Sobic003G135400 Sobic003G135400 Sobic005G047100--Sobic003G135400 Sobic003G420100 Sobic003G420100 Sobic005G047100--Sobic003G420100 Sobic010G277300 Sobic010G277300 Sobic007G094400--Sobic010G277300 Sobic007G094400--Sobic001G107200 Sobic007G094400--Sobic006G191700 Sobic004G286700 Sobic004G286700 Sobic007G094400--Sobic004G286700 Sobic007G094400--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic007G094400--Sobic001G487200 Sobic007G094400--Sobic001G528600 Sobic001G051300 Sobic001G051300 Sobic007G094400--Sobic001G051300 Sobic006G207400 Sobic006G207400 Sobic007G094400--Sobic006G207400 Sobic003G250700--Sobic001G107100 Sobic003G250700--Sobic001G038300 Sobic001G046800 Sobic001G046800 Sobic003G250700--Sobic001G046800 Sobic003G000200 Sobic003G000200 Sobic003G250700--Sobic003G000200 Sobic010G047600 Sobic010G047600 Sobic003G250700--Sobic010G047600 Sobic003G250700--Sobic003G321400 Sobic010G014400 Sobic010G014400 Sobic003G250700--Sobic010G014400 Sobic003G250700--Sobic004G170800 Sobic003G250700--Sobic001G156500 Sobic007G150800 Sobic007G150800 Sobic003G011100--Sobic007G150800 Sobic006G216600 Sobic006G216600 Sobic003G011100--Sobic006G216600 Sobic003G011100--Sobic001G475500 Sobic006G201500 Sobic006G201500 Sobic003G011100--Sobic006G201500 Sobic003G396600 Sobic003G396600 Sobic003G011100--Sobic003G396600 Sobic009G144300 Sobic009G144300 Sobic003G011100--Sobic009G144300 Sobic006G115000 Sobic006G115000 Sobic003G011100--Sobic006G115000 Sobic003G387900 Sobic003G387900 Sobic003G011100--Sobic003G387900 Sobic009G233400 Sobic009G233400 Sobic003G011100--Sobic009G233400 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic002G128800 Sobic002G128800 Sobic006G278100--Sobic002G128800 Sobic006G278100--Sobic003G250700 Sobic009G232200 Sobic009G232200 Sobic006G278100--Sobic009G232200 Sobic002G338400 Sobic002G338400 Sobic006G278100--Sobic002G338400 Sobic006G278100--Sobic003G122200 Sobic006G278100--Sobic006G191700 Sobic006G278100--Sobic001G261549
Octagon: transcription factors


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