Gene annotation
Transcriptome id Sobic.003G151300.1,Sobic.003G151300.2
Synonym Sb03g013130
Functional annotation serine/threonine-protein kinase, putative, expressed
UniProt C5XIX1
Pfam PF00069
Panther DB PTHR27001 PTHR27001:SF82
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G56720 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os01g21960.1 : serine/threonine-protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a024373
Brachypodium KQK04179 , KQK04178 , KQK04180
Barley HORVU3Hr1G041810.5 , HORVU3Hr1G041810.4 , HORVU3Hr1G041810.7 , HORVU3Hr1G041810.6 , HORVU3Hr1G041810.3 , HORVU3Hr1G041810.2 , HORVU3Hr1G041810.9 , HORVU3Hr1G041810.8
Wheat TraesCS3B02G193200 , TraesCS3A02G161800 , TraesCS3A02G161800 , TraesCS3A02G161800 , TraesCS3D02G169000 , TraesCS3D02G169000 , TraesCS3D02G169000 , TraesCS3D02G169000
Populus -


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cDNA sequences
Sobic.003G151300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
2 Sobic.008G008400 F-box/LRR-repeat protein 3, putative, expressed -
3 Sobic.008G174800 DNA binding protein, putative, expressed -
4 Sobic.010G224900 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
5 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
6 Sobic.001G107200 tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
7 Sobic.008G021900 nucleoside-triphosphatase, putative, expressed K14641: apyrase
8 Sobic.004G203900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
9 Sobic.004G134100 glycosyltransferase, putative, expressed -
10 Sobic.004G051300 galactosyltransferase, putative, expressed -
11 Sobic.005G204700 polygalacturonase, putative, expressed -
12 Sobic.003G003700 ABIL2, putative, expressed -
13 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
14 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
15 Sobic.001G339400 proline-rich protein, putative, expressed -
16 Sobic.001G089100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed K05349: beta-glucosidase
17 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
18 Sobic.006G191700 expansin precursor, putative, expressed -
19 Sobic.004G006700 tetratricopeptide repeat domain containing protein, expressed -
20 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase


Gene co-expression network
sample Sobic003G151300 Sobic003G151300 Sobic009G026200 Sobic009G026200 Sobic003G151300--Sobic009G026200 Sobic008G008400 Sobic008G008400 Sobic003G151300--Sobic008G008400 Sobic008G174800 Sobic008G174800 Sobic003G151300--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic003G151300--Sobic010G224900 Sobic009G162500 Sobic009G162500 Sobic003G151300--Sobic009G162500 Sobic001G107200 Sobic001G107200 Sobic003G151300--Sobic001G107200 Sobic008G021900 Sobic008G021900 Sobic003G151300--Sobic008G021900 Sobic004G203900 Sobic004G203900 Sobic003G151300--Sobic004G203900 Sobic004G134100 Sobic004G134100 Sobic003G151300--Sobic004G134100 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic009G026200--Sobic008G174800 Sobic009G026200--Sobic010G224900 Sobic009G026200--Sobic008G008400 Sobic004G051300 Sobic004G051300 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic008G008400--Sobic003G151300 Sobic009G013700 Sobic009G013700 Sobic008G008400--Sobic009G013700 Sobic008G008400--Sobic009G026200 Sobic010G105701 Sobic010G105701 Sobic008G008400--Sobic010G105701 Sobic009G030300 Sobic009G030300 Sobic008G008400--Sobic009G030300 Sobic004G067000 Sobic004G067000 Sobic008G008400--Sobic004G067000 Sobic008G008400--Sobic004G134100 Sobic003G101300 Sobic003G101300 Sobic008G008400--Sobic003G101300 Sobic003G347300 Sobic003G347300 Sobic008G008400--Sobic003G347300 Sobic008G174800--Sobic003G151300 Sobic008G174800--Sobic009G026200 Sobic003G198500 Sobic003G198500 Sobic008G174800--Sobic003G198500 Sobic004G247300 Sobic004G247300 Sobic008G174800--Sobic004G247300 Sobic009G079100 Sobic009G079100 Sobic008G174800--Sobic009G079100 Sobic008G174800--Sobic004G051300 Sobic008G174800--Sobic008G008400 Sobic010G060600 Sobic010G060600 Sobic008G174800--Sobic010G060600 Sobic008G174800--Sobic004G134100 Sobic010G224900--Sobic003G151300 Sobic010G224900--Sobic001G107200 Sobic010G224900--Sobic004G006700 Sobic010G224900--Sobic009G026200 Sobic005G211200 Sobic005G211200 Sobic010G224900--Sobic005G211200 Sobic002G348000 Sobic002G348000 Sobic010G224900--Sobic002G348000 Sobic001G215500 Sobic001G215500 Sobic010G224900--Sobic001G215500 Sobic003G128000 Sobic003G128000 Sobic010G224900--Sobic003G128000 Sobic010G224900--Sobic001G069800 Sobic003G296400 Sobic003G296400 Sobic009G162500--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G162500--Sobic002G205500 Sobic003G062000 Sobic003G062000 Sobic009G162500--Sobic003G062000 Sobic009G162500--Sobic003G151300 Sobic002G003200 Sobic002G003200 Sobic009G162500--Sobic002G003200 Sobic003G366300 Sobic003G366300 Sobic009G162500--Sobic003G366300 Sobic001G535400 Sobic001G535400 Sobic009G162500--Sobic001G535400 Sobic009G153800 Sobic009G153800 Sobic009G162500--Sobic009G153800 Sobic009G032600 Sobic009G032600 Sobic009G162500--Sobic009G032600 Sobic001G528600 Sobic001G528600 Sobic001G107200--Sobic001G528600 Sobic006G191700 Sobic006G191700 Sobic001G107200--Sobic006G191700 Sobic001G107100 Sobic001G107100 Sobic001G107200--Sobic001G107100 Sobic002G350400 Sobic002G350400 Sobic001G107200--Sobic002G350400 Sobic005G047100 Sobic005G047100 Sobic001G107200--Sobic005G047100 Sobic007G094400 Sobic007G094400 Sobic001G107200--Sobic007G094400 Sobic003G250700 Sobic003G250700 Sobic001G107200--Sobic003G250700 Sobic003G011100 Sobic003G011100 Sobic001G107200--Sobic003G011100 Sobic006G278100 Sobic006G278100 Sobic001G107200--Sobic006G278100 Sobic001G250100 Sobic001G250100 Sobic008G021900--Sobic001G250100 Sobic008G021900--Sobic003G151300 Sobic001G112800 Sobic001G112800 Sobic008G021900--Sobic001G112800 Sobic008G021900--Sobic003G366300 Sobic008G157000 Sobic008G157000 Sobic008G021900--Sobic008G157000 Sobic010G014400 Sobic010G014400 Sobic008G021900--Sobic010G014400 Sobic001G365200 Sobic001G365200 Sobic008G021900--Sobic001G365200 Sobic003G099166 Sobic003G099166 Sobic008G021900--Sobic003G099166 Sobic010G218300 Sobic010G218300 Sobic008G021900--Sobic010G218300 Sobic003G071400 Sobic003G071400 Sobic004G203900--Sobic003G071400 Sobic004G265600 Sobic004G265600 Sobic004G203900--Sobic004G265600 Sobic004G203900--Sobic003G151300 Sobic004G203900--Sobic009G032600 Sobic006G038200 Sobic006G038200 Sobic004G203900--Sobic006G038200 Sobic008G000100 Sobic008G000100 Sobic004G203900--Sobic008G000100 Sobic002G347400 Sobic002G347400 Sobic004G203900--Sobic002G347400 Sobic003G098600 Sobic003G098600 Sobic004G203900--Sobic003G098600 Sobic004G168700 Sobic004G168700 Sobic004G203900--Sobic004G168700 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic004G134100--Sobic001G069800 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic004G134100--Sobic003G151300
Octagon: transcription factors


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