Gene annotation
Transcriptome id Sobic.008G174800.1
Synonym Sb08g021920
Functional annotation DNA binding protein, putative, expressed
UniProt C5YSE2
Pfam PF02485
Panther DB PTHR31042 PTHR31042:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0008375acetylglucosaminyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G52060 : Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
RAP-DB (Rice) LOC_Os12g42420.1 : DNA binding protein, putative, expressed
MaizeGDB (Corn) Zm00025a045047 , Zm00025a025149 , Zm00025a017243 , Zm00025a004729 , Zm00025a007245
Brachypodium KQJ85741 , KQK20859
Barley HORVU0Hr1G010000.3 , HORVU0Hr1G010000.2 , HORVU0Hr1G010000.4
Wheat -
Populus -


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cDNA sequences
Sobic.008G174800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
2 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
3 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
4 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
5 Sobic.009G079100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@serine/threonine-protein kinase, putative, expressed -
6 Sobic.004G051300 galactosyltransferase, putative, expressed -
7 Sobic.008G008400 F-box/LRR-repeat protein 3, putative, expressed -
8 Sobic.010G060600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@inorganic H+ pyrophosphatase, putative, expressed K01507: inorganic pyrophosphatase
9 Sobic.004G134100 glycosyltransferase, putative, expressed -
10 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
11 Sobic.001G099100 endoglucanase, putative, expressed K01179: endoglucanase
12 Sobic.008G021900 nucleoside-triphosphatase, putative, expressed K14641: apyrase
13 Sobic.010G090500 expressed protein -
14 Sobic.006G279900 RING finger protein 13, putative, expressed K15692: RNF13, E3 ubiquitin-protein ligase RNF13
15 Sobic.003G366300 protein kinase domain containing protein, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
16 Sobic.009G013700 pectinacetylesterase domain containing protein, expressed -
17 Sobic.002G333800 CSLF8 - cellulose synthase-like family F@ beta1,3@1,4 glucan synthase, expressed K00770: 1,4-beta-D-xylan synthase
18 Sobic.005G204700 polygalacturonase, putative, expressed -
19 Sobic.009G013900 ankyrin repeat domain-containing protein 28, putative, expressed -
20 Sobic.004G220300 "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed K13064: phenylalanine/tyrosine ammonia-lyase


Gene co-expression network
sample Sobic008G174800 Sobic008G174800 Sobic003G151300 Sobic003G151300 Sobic008G174800--Sobic003G151300 Sobic009G026200 Sobic009G026200 Sobic008G174800--Sobic009G026200 Sobic003G198500 Sobic003G198500 Sobic008G174800--Sobic003G198500 Sobic004G247300 Sobic004G247300 Sobic008G174800--Sobic004G247300 Sobic009G079100 Sobic009G079100 Sobic008G174800--Sobic009G079100 Sobic004G051300 Sobic004G051300 Sobic008G174800--Sobic004G051300 Sobic008G008400 Sobic008G008400 Sobic008G174800--Sobic008G008400 Sobic010G060600 Sobic010G060600 Sobic008G174800--Sobic010G060600 Sobic004G134100 Sobic004G134100 Sobic008G174800--Sobic004G134100 Sobic003G151300--Sobic009G026200 Sobic003G151300--Sobic008G008400 Sobic003G151300--Sobic008G174800 Sobic010G224900 Sobic010G224900 Sobic003G151300--Sobic010G224900 Sobic009G162500 Sobic009G162500 Sobic003G151300--Sobic009G162500 Sobic001G107200 Sobic001G107200 Sobic003G151300--Sobic001G107200 Sobic008G021900 Sobic008G021900 Sobic003G151300--Sobic008G021900 Sobic004G203900 Sobic004G203900 Sobic003G151300--Sobic004G203900 Sobic003G151300--Sobic004G134100 Sobic009G026200--Sobic003G151300 Sobic009G026200--Sobic004G134100 Sobic001G069800 Sobic001G069800 Sobic009G026200--Sobic001G069800 Sobic009G026200--Sobic008G174800 Sobic009G026200--Sobic010G224900 Sobic009G026200--Sobic008G008400 Sobic009G026200--Sobic004G051300 Sobic004G006700 Sobic004G006700 Sobic009G026200--Sobic004G006700 Sobic001G230900 Sobic001G230900 Sobic009G026200--Sobic001G230900 Sobic003G198500--Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic003G198500--Sobic010G090500 Sobic001G073150 Sobic001G073150 Sobic003G198500--Sobic001G073150 Sobic003G366300 Sobic003G366300 Sobic003G198500--Sobic003G366300 Sobic002G312700 Sobic002G312700 Sobic003G198500--Sobic002G312700 Sobic003G198500--Sobic004G051300 Sobic009G246700 Sobic009G246700 Sobic003G198500--Sobic009G246700 Sobic010G022400 Sobic010G022400 Sobic003G198500--Sobic010G022400 Sobic003G198500--Sobic008G174800 Sobic005G054700 Sobic005G054700 Sobic004G247300--Sobic005G054700 Sobic001G514400 Sobic001G514400 Sobic004G247300--Sobic001G514400 Sobic009G175200 Sobic009G175200 Sobic004G247300--Sobic009G175200 Sobic002G034301 Sobic002G034301 Sobic004G247300--Sobic002G034301 Sobic001G215900 Sobic001G215900 Sobic004G247300--Sobic001G215900 Sobic009G099700 Sobic009G099700 Sobic004G247300--Sobic009G099700 Sobic001G366800 Sobic001G366800 Sobic004G247300--Sobic001G366800 Sobic010G242900 Sobic010G242900 Sobic004G247300--Sobic010G242900 Sobic006G213100 Sobic006G213100 Sobic004G247300--Sobic006G213100 Sobic009G079100--Sobic010G090500 Sobic009G079100--Sobic003G198500 Sobic009G026101 Sobic009G026101 Sobic009G079100--Sobic009G026101 Sobic009G079100--Sobic004G051300 Sobic007G040301 Sobic007G040301 Sobic009G079100--Sobic007G040301 Sobic007G211600 Sobic007G211600 Sobic009G079100--Sobic007G211600 Sobic001G133900 Sobic001G133900 Sobic009G079100--Sobic001G133900 Sobic009G079100--Sobic009G246700 Sobic009G206500 Sobic009G206500 Sobic009G079100--Sobic009G206500 Sobic001G099100 Sobic001G099100 Sobic004G051300--Sobic001G099100 Sobic002G118700 Sobic002G118700 Sobic004G051300--Sobic002G118700 Sobic009G125900 Sobic009G125900 Sobic004G051300--Sobic009G125900 Sobic002G075500 Sobic002G075500 Sobic004G051300--Sobic002G075500 Sobic004G051300--Sobic009G026101 Sobic002G276600 Sobic002G276600 Sobic004G051300--Sobic002G276600 Sobic004G051300--Sobic009G079100 Sobic004G051300--Sobic010G090500 Sobic009G063400 Sobic009G063400 Sobic004G051300--Sobic009G063400 Sobic008G008400--Sobic003G151300 Sobic009G013700 Sobic009G013700 Sobic008G008400--Sobic009G013700 Sobic008G008400--Sobic009G026200 Sobic010G105701 Sobic010G105701 Sobic008G008400--Sobic010G105701 Sobic009G030300 Sobic009G030300 Sobic008G008400--Sobic009G030300 Sobic004G067000 Sobic004G067000 Sobic008G008400--Sobic004G067000 Sobic008G008400--Sobic004G134100 Sobic003G101300 Sobic003G101300 Sobic008G008400--Sobic003G101300 Sobic003G347300 Sobic003G347300 Sobic008G008400--Sobic003G347300 Sobic009G059500 Sobic009G059500 Sobic010G060600--Sobic009G059500 Sobic005G164700 Sobic005G164700 Sobic010G060600--Sobic005G164700 Sobic001G112700 Sobic001G112700 Sobic010G060600--Sobic001G112700 Sobic002G280700 Sobic002G280700 Sobic010G060600--Sobic002G280700 Sobic008G004100 Sobic008G004100 Sobic010G060600--Sobic008G004100 Sobic002G332100 Sobic002G332100 Sobic010G060600--Sobic002G332100 Sobic010G060600--Sobic003G198500 Sobic002G252000 Sobic002G252000 Sobic010G060600--Sobic002G252000 Sobic003G294100 Sobic003G294100 Sobic010G060600--Sobic003G294100 Sobic004G134100--Sobic009G026200 Sobic004G134100--Sobic010G242900 Sobic004G134100--Sobic001G069800 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic004G134100--Sobic001G215900 Sobic004G134100--Sobic001G366800 Sobic004G134100--Sobic003G151300
Octagon: transcription factors


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