Gene annotation
Transcriptome id Sobic.004G247300.1,Sobic.004G247300.3
Synonym PDLP7, Sb04g028720
Functional annotation cysteine-rich repeat secretory protein precursor, putative, expressed
UniProt C5XZA2 , A0A1Z5RNX2
Pfam PF01657
Panther DB PTHR32080 PTHR32080:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G37660 : plasmodesmata-located protein 7
RAP-DB (Rice) LOC_Os02g50200.1 : cysteine-rich repeat secretory protein precursor, putative, expressed
MaizeGDB (Corn) Zm00025a021946 , Zm00025a049371
Brachypodium PNT69689
Barley HORVU6Hr1G073850.1 , HORVU0Hr1G020360.5 , HORVU0Hr1G020360.6 , HORVU0Hr1G020360.1 , HORVU0Hr1G020360.3
Wheat TraesCS7D02G206000 , TraesCS7B02G109700 , TraesCS7A02G202700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G054700 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
2 Sobic.001G514400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
3 Sobic.009G175200 expressed protein -
4 Sobic.002G034301 - -
5 Sobic.001G215900 TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.009G099700 - -
7 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
8 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
9 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
10 Sobic.003G151300 serine/threonine-protein kinase, putative, expressed -
11 Sobic.004G134100 glycosyltransferase, putative, expressed -
12 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
13 Sobic.002G168600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
14 Sobic.008G174800 DNA binding protein, putative, expressed -
15 Sobic.001G258100 OsSub60 - Putative Subtilisin homologue, expressed -
16 Sobic.010G095100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
17 Sobic.009G026200 IQ calmodulin-binding motif domain containing protein, expressed -
18 Sobic.010G161900 peroxidase precursor, putative, expressed K00430: peroxidase
19 Sobic.002G073400 - -
20 Sobic.008G004100 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase


Gene co-expression network
sample Sobic004G247300 Sobic004G247300 Sobic005G054700 Sobic005G054700 Sobic004G247300--Sobic005G054700 Sobic001G514400 Sobic001G514400 Sobic004G247300--Sobic001G514400 Sobic009G175200 Sobic009G175200 Sobic004G247300--Sobic009G175200 Sobic002G034301 Sobic002G034301 Sobic004G247300--Sobic002G034301 Sobic001G215900 Sobic001G215900 Sobic004G247300--Sobic001G215900 Sobic009G099700 Sobic009G099700 Sobic004G247300--Sobic009G099700 Sobic001G366800 Sobic001G366800 Sobic004G247300--Sobic001G366800 Sobic010G242900 Sobic010G242900 Sobic004G247300--Sobic010G242900 Sobic006G213100 Sobic006G213100 Sobic004G247300--Sobic006G213100 Sobic005G054700--Sobic004G247300 Sobic005G054700--Sobic009G099700 Sobic001G361800 Sobic001G361800 Sobic005G054700--Sobic001G361800 Sobic005G054700--Sobic001G514400 Sobic005G054700--Sobic002G034301 Sobic005G054700--Sobic009G175200 Sobic002G168600 Sobic002G168600 Sobic005G054700--Sobic002G168600 Sobic010G161900 Sobic010G161900 Sobic005G054700--Sobic010G161900 Sobic002G393200 Sobic002G393200 Sobic005G054700--Sobic002G393200 Sobic005G121700 Sobic005G121700 Sobic001G514400--Sobic005G121700 Sobic004G259101 Sobic004G259101 Sobic001G514400--Sobic004G259101 Sobic001G258100 Sobic001G258100 Sobic001G514400--Sobic001G258100 Sobic001G514400--Sobic004G247300 Sobic001G409700 Sobic001G409700 Sobic001G514400--Sobic001G409700 Sobic001G514400--Sobic009G099700 Sobic009G061400 Sobic009G061400 Sobic001G514400--Sobic009G061400 Sobic009G021700 Sobic009G021700 Sobic001G514400--Sobic009G021700 Sobic001G514400--Sobic005G054700 Sobic008G086200 Sobic008G086200 Sobic009G175200--Sobic008G086200 Sobic003G174900 Sobic003G174900 Sobic009G175200--Sobic003G174900 Sobic009G175200--Sobic009G099700 Sobic009G175200--Sobic001G361800 Sobic009G175200--Sobic004G247300 Sobic007G210900 Sobic007G210900 Sobic009G175200--Sobic007G210900 Sobic004G154600 Sobic004G154600 Sobic009G175200--Sobic004G154600 Sobic003G375000 Sobic003G375000 Sobic009G175200--Sobic003G375000 Sobic004G225700 Sobic004G225700 Sobic009G175200--Sobic004G225700 Sobic007G208100 Sobic007G208100 Sobic002G034301--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic002G034301--Sobic005G231300 Sobic005G057000 Sobic005G057000 Sobic002G034301--Sobic005G057000 Sobic002G034301--Sobic005G121700 Sobic007G111700 Sobic007G111700 Sobic002G034301--Sobic007G111700 Sobic008G077300 Sobic008G077300 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic003G420100 Sobic003G420100 Sobic002G034301--Sobic003G420100 Sobic003G052100 Sobic003G052100 Sobic002G034301--Sobic003G052100 Sobic001G215900--Sobic010G242900 Sobic001G215900--Sobic001G366800 Sobic001G215900--Sobic002G168600 Sobic010G138500 Sobic010G138500 Sobic001G215900--Sobic010G138500 Sobic004G134100 Sobic004G134100 Sobic001G215900--Sobic004G134100 Sobic001G215900--Sobic004G247300 Sobic006G130501 Sobic006G130501 Sobic001G215900--Sobic006G130501 Sobic009G013700 Sobic009G013700 Sobic001G215900--Sobic009G013700 Sobic009G133900 Sobic009G133900 Sobic001G215900--Sobic009G133900 Sobic009G099700--Sobic005G054700 Sobic009G099700--Sobic009G175200 Sobic009G099700--Sobic001G514400 Sobic009G099700--Sobic004G247300 Sobic009G099700--Sobic001G361800 Sobic009G099700--Sobic001G258100 Sobic009G099700--Sobic007G210900 Sobic009G099700--Sobic004G154600 Sobic002G232500 Sobic002G232500 Sobic009G099700--Sobic002G232500 Sobic009G055400 Sobic009G055400 Sobic001G366800--Sobic009G055400 Sobic001G366800--Sobic001G215900 Sobic002G301500 Sobic002G301500 Sobic001G366800--Sobic002G301500 Sobic001G366800--Sobic004G134100 Sobic006G177300 Sobic006G177300 Sobic001G366800--Sobic006G177300 Sobic001G366800--Sobic004G247300 Sobic001G366800--Sobic002G393200 Sobic001G366800--Sobic010G138500 Sobic001G366800--Sobic010G242900 Sobic010G242900--Sobic001G215900 Sobic010G242900--Sobic004G134100 Sobic010G242900--Sobic002G168600 Sobic010G242900--Sobic009G013700 Sobic010G242900--Sobic010G138500 Sobic010G242900--Sobic001G366800 Sobic010G242900--Sobic006G130501 Sobic010G242900--Sobic004G247300 Sobic006G098200 Sobic006G098200 Sobic010G242900--Sobic006G098200 Sobic006G133600 Sobic006G133600 Sobic006G213100--Sobic006G133600 Sobic009G214600 Sobic009G214600 Sobic006G213100--Sobic009G214600 Sobic003G397300 Sobic003G397300 Sobic006G213100--Sobic003G397300 Sobic003G328800 Sobic003G328800 Sobic006G213100--Sobic003G328800 Sobic007G191100 Sobic007G191100 Sobic006G213100--Sobic007G191100 Sobic001G056300 Sobic001G056300 Sobic006G213100--Sobic001G056300 Sobic003G044900 Sobic003G044900 Sobic006G213100--Sobic003G044900 Sobic004G220300 Sobic004G220300 Sobic006G213100--Sobic004G220300 Sobic007G099500 Sobic007G099500 Sobic006G213100--Sobic007G099500
Octagon: transcription factors


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