Gene annotation
Transcriptome id Sobic.002G034301.1
Synonym -
Functional annotation -
UniProt A0A1W0W230
Pfam PF07983
Panther DB PTHR32227 PTHR32227:SF51
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G05430 : Carbohydrate-binding X8 domain superfamily protein
RAP-DB (Rice) LOC_Os01g53750.1 : glucan endo-1,3-beta-glucosidase precursor, putative, expressed
MaizeGDB (Corn) -
Brachypodium PNT77148
Barley HORVU2Hr1G060450.9 , HORVU2Hr1G060450.8 , HORVU2Hr1G060450.1
Wheat TraesCS2A02G252300 , TraesCS2B02G272100 , TraesCS2D02G253000
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G208100 heavy metal-associated domain containing protein, expressed -
2 Sobic.005G231300 thaumatin, putative, expressed -
3 Sobic.005G057000 Leucine Rich Repeat family protein, expressed -
4 Sobic.005G121700 expressed protein -
5 Sobic.007G111700 glutathione S-transferase, C-terminal domain containing protein, expressed -
6 Sobic.008G077300 expressed protein -
7 Sobic.002G016400 monocopper oxidase, putative, expressed -
8 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
9 Sobic.003G052100 receptor-like protein kinase 2 precursor, putative, expressed -
10 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
11 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
12 Sobic.001G514300 Glutathione S-transferase("PubMedID : 26759170,PubMedID : 24597475")@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
13 Sobic.001G402400 expressed protein -
14 Sobic.008G170400 expressed protein -
15 Sobic.001G314000 peroxidase precursor, putative, expressed K00430: peroxidase
16 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.009G079900 endoglucanase precursor, putative, expressed -
18 Sobic.010G095100 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower, stem and root, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
19 Sobic.005G025900 "domain confirmed by Pfam database, expression supported by NCBI EST database,expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed K13947: auxin efflux carrier family protein
20 Sobic.002G393200 CAMK_CAMK_like.36 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -


Gene co-expression network
sample Sobic002G034301 Sobic002G034301 Sobic007G208100 Sobic007G208100 Sobic002G034301--Sobic007G208100 Sobic005G231300 Sobic005G231300 Sobic002G034301--Sobic005G231300 Sobic005G057000 Sobic005G057000 Sobic002G034301--Sobic005G057000 Sobic005G121700 Sobic005G121700 Sobic002G034301--Sobic005G121700 Sobic007G111700 Sobic007G111700 Sobic002G034301--Sobic007G111700 Sobic008G077300 Sobic008G077300 Sobic002G034301--Sobic008G077300 Sobic002G016400 Sobic002G016400 Sobic002G034301--Sobic002G016400 Sobic003G420100 Sobic003G420100 Sobic002G034301--Sobic003G420100 Sobic003G052100 Sobic003G052100 Sobic002G034301--Sobic003G052100 Sobic007G208100--Sobic005G231300 Sobic007G208100--Sobic002G016400 Sobic003G296500 Sobic003G296500 Sobic007G208100--Sobic003G296500 Sobic006G149300 Sobic006G149300 Sobic007G208100--Sobic006G149300 Sobic007G208100--Sobic002G034301 Sobic007G208100--Sobic003G420100 Sobic010G104400 Sobic010G104400 Sobic007G208100--Sobic010G104400 Sobic003G247600 Sobic003G247600 Sobic007G208100--Sobic003G247600 Sobic001G514300 Sobic001G514300 Sobic007G208100--Sobic001G514300 Sobic005G231300--Sobic001G514300 Sobic003G083600 Sobic003G083600 Sobic005G231300--Sobic003G083600 Sobic009G079900 Sobic009G079900 Sobic005G231300--Sobic009G079900 Sobic008G099100 Sobic008G099100 Sobic005G231300--Sobic008G099100 Sobic005G231300--Sobic007G208100 Sobic006G030200 Sobic006G030200 Sobic005G231300--Sobic006G030200 Sobic001G314000 Sobic001G314000 Sobic005G231300--Sobic001G314000 Sobic005G231300--Sobic008G077300 Sobic003G151900 Sobic003G151900 Sobic005G231300--Sobic003G151900 Sobic001G402400 Sobic001G402400 Sobic005G057000--Sobic001G402400 Sobic005G057000--Sobic002G034301 Sobic002G283500 Sobic002G283500 Sobic005G057000--Sobic002G283500 Sobic008G170400 Sobic008G170400 Sobic005G057000--Sobic008G170400 Sobic005G057000--Sobic009G079900 Sobic005G057000--Sobic003G296500 Sobic005G057000--Sobic005G231300 Sobic005G057000--Sobic007G111700 Sobic003G270400 Sobic003G270400 Sobic005G057000--Sobic003G270400 Sobic001G514400 Sobic001G514400 Sobic005G121700--Sobic001G514400 Sobic005G098400 Sobic005G098400 Sobic005G121700--Sobic005G098400 Sobic005G121700--Sobic008G077300 Sobic009G021700 Sobic009G021700 Sobic005G121700--Sobic009G021700 Sobic001G305300 Sobic001G305300 Sobic005G121700--Sobic001G305300 Sobic007G225400 Sobic007G225400 Sobic005G121700--Sobic007G225400 Sobic005G121700--Sobic002G034301 Sobic005G121700--Sobic007G208100 Sobic005G121700--Sobic002G016400 Sobic007G111700--Sobic008G170400 Sobic007G111700--Sobic002G016400 Sobic007G111700--Sobic005G098400 Sobic007G050500 Sobic007G050500 Sobic007G111700--Sobic007G050500 Sobic005G025900 Sobic005G025900 Sobic007G111700--Sobic005G025900 Sobic001G345200 Sobic001G345200 Sobic007G111700--Sobic001G345200 Sobic007G111700--Sobic002G034301 Sobic007G202100 Sobic007G202100 Sobic007G111700--Sobic007G202100 Sobic003G419600 Sobic003G419600 Sobic007G111700--Sobic003G419600 Sobic001G264400 Sobic001G264400 Sobic008G077300--Sobic001G264400 Sobic008G077300--Sobic005G231300 Sobic008G077300--Sobic001G514300 Sobic008G077300--Sobic005G121700 Sobic008G077300--Sobic006G030200 Sobic008G077300--Sobic007G208100 Sobic008G077300--Sobic002G016400 Sobic004G297950 Sobic004G297950 Sobic008G077300--Sobic004G297950 Sobic004G156900 Sobic004G156900 Sobic008G077300--Sobic004G156900 Sobic002G016400--Sobic005G098400 Sobic003G418300 Sobic003G418300 Sobic002G016400--Sobic003G418300 Sobic002G016400--Sobic007G050500 Sobic002G016400--Sobic001G305300 Sobic002G016400--Sobic001G345200 Sobic002G016400--Sobic007G208100 Sobic002G016400--Sobic006G149300 Sobic001G382700 Sobic001G382700 Sobic002G016400--Sobic001G382700 Sobic002G016400--Sobic008G170400 Sobic003G420100--Sobic003G247600 Sobic004G233700 Sobic004G233700 Sobic003G420100--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic003G420100--Sobic009G242501 Sobic003G420100--Sobic007G208100 Sobic004G286700 Sobic004G286700 Sobic003G420100--Sobic004G286700 Sobic005G047100 Sobic005G047100 Sobic003G420100--Sobic005G047100 Sobic008G141200 Sobic008G141200 Sobic003G420100--Sobic008G141200 Sobic004G066900 Sobic004G066900 Sobic003G420100--Sobic004G066900 Sobic003G135400 Sobic003G135400 Sobic003G420100--Sobic003G135400 Sobic003G052100--Sobic001G402400 Sobic007G041600 Sobic007G041600 Sobic003G052100--Sobic007G041600 Sobic002G275500 Sobic002G275500 Sobic003G052100--Sobic002G275500 Sobic010G220300 Sobic010G220300 Sobic003G052100--Sobic010G220300 Sobic006G009500 Sobic006G009500 Sobic003G052100--Sobic006G009500 Sobic003G052100--Sobic009G079900 Sobic003G052100--Sobic003G296500 Sobic003G052100--Sobic005G231300 Sobic004G271500 Sobic004G271500 Sobic003G052100--Sobic004G271500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.