Gene annotation
Transcriptome id Sobic.004G286700.2,Sobic.004G286700.1
Synonym Sb04g032260
Functional annotation GDSL-like lipase/acylhydrolase, putative, expressed
UniProt A0A194YS27 , A0A194YT82
Pfam PF00657
Panther DB PTHR22835 PTHR22835:SF246
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016788; hydrolase activity, acting on ester bonds


Orthologs (automatic annotation)
TAIR AT5G55050 : GDSL-like Lipase/Acylhydrolase superfamily protein
RAP-DB (Rice) LOC_Os02g44860.1 : GDSL-like lipase/acylhydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a032267
Brachypodium -
Barley HORVU6Hr1G064610.9 , HORVU6Hr1G064610.8 , HORVU6Hr1G064610.7 , HORVU6Hr1G064610.6 , HORVU6Hr1G064610.5 , HORVU6Hr1G064610.4 , HORVU6Hr1G064610.3 , HORVU6Hr1G064610.2 , HORVU6Hr1G064610.1 , HORVU6Hr1G064610.10
Wheat TraesCS6A02G072400 , TraesCS4B02G339400 , TraesCS4B02G339300 , TraesCS4B02G339400 , TraesCS5A02G509100 , TraesCS6D02G070400 , TraesCS6B02G097400 , TraesCS6B02G273200 , TraesCS5A02G517200 , TraesCS6D02G234600 , TraesCS4D02G335600
Populus -


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cDNA sequences
Sobic.004G286700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G420100 RNA recognition motif containing protein, putative, expressed K13207: CUGBP, BRUNOL, CUG-BP- and ETR3-like factor
2 Sobic.001G468500 ethylene-responsive element-binding protein, putative, expressed -
3 Sobic.003G410600 exostosin family domain containing protein, expressed -
4 Sobic.007G113300 BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed -
5 Sobic.007G094400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fiber protein Fb34, putative, expressed -
6 Sobic.003G017500 TTL1, putative, expressed -
7 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
8 Sobic.009G242501 - -
9 Sobic.009G021700 expressed protein -
10 Sobic.002G034301 - -
11 Sobic.010G277300 "BRD2(Ortholog in rice:Hong et al., 2005)"(PubMedID : 31659939)@FAD-linked oxidoreductase protein, putative, expressed K09828: DHCR24, Delta24-sterol reductase
12 Sobic.002G280700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@WD domain, G-beta repeat domain containing protein, expressed K10752: RBBP4, HAT2, CAF1, histone-binding protein RBBP4
13 Sobic.002G383100 expressed protein -
14 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
15 Sobic.003G003700 ABIL2, putative, expressed -
16 Sobic.001G528600 remorin family protein, putative, expressed -
17 Sobic.004G054000 expressed protein -
18 Sobic.002G146601 - -
19 Sobic.007G130900 expressed protein -
20 Sobic.001G051300 BEE 1, putative, expressed -


Gene co-expression network
sample Sobic004G286700 Sobic004G286700 Sobic003G420100 Sobic003G420100 Sobic004G286700--Sobic003G420100 Sobic001G468500 Sobic001G468500 Sobic004G286700--Sobic001G468500 Sobic003G410600 Sobic003G410600 Sobic004G286700--Sobic003G410600 Sobic007G113300 Sobic007G113300 Sobic004G286700--Sobic007G113300 Sobic007G094400 Sobic007G094400 Sobic004G286700--Sobic007G094400 Sobic003G017500 Sobic003G017500 Sobic004G286700--Sobic003G017500 Sobic004G233700 Sobic004G233700 Sobic004G286700--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic004G286700--Sobic009G242501 Sobic009G021700 Sobic009G021700 Sobic004G286700--Sobic009G021700 Sobic003G247600 Sobic003G247600 Sobic003G420100--Sobic003G247600 Sobic003G420100--Sobic004G233700 Sobic003G420100--Sobic009G242501 Sobic007G208100 Sobic007G208100 Sobic003G420100--Sobic007G208100 Sobic003G420100--Sobic004G286700 Sobic005G047100 Sobic005G047100 Sobic003G420100--Sobic005G047100 Sobic008G141200 Sobic008G141200 Sobic003G420100--Sobic008G141200 Sobic004G066900 Sobic004G066900 Sobic003G420100--Sobic004G066900 Sobic003G135400 Sobic003G135400 Sobic003G420100--Sobic003G135400 Sobic003G283600 Sobic003G283600 Sobic001G468500--Sobic003G283600 Sobic003G003700 Sobic003G003700 Sobic001G468500--Sobic003G003700 Sobic001G468500--Sobic004G286700 Sobic010G277300 Sobic010G277300 Sobic001G468500--Sobic010G277300 Sobic006G133700 Sobic006G133700 Sobic001G468500--Sobic006G133700 Sobic001G030400 Sobic001G030400 Sobic001G468500--Sobic001G030400 Sobic002G238500 Sobic002G238500 Sobic001G468500--Sobic002G238500 Sobic004G036800 Sobic004G036800 Sobic001G468500--Sobic004G036800 Sobic004G331200 Sobic004G331200 Sobic001G468500--Sobic004G331200 Sobic003G294500 Sobic003G294500 Sobic003G410600--Sobic003G294500 Sobic003G013000 Sobic003G013000 Sobic003G410600--Sobic003G013000 Sobic005G144600 Sobic005G144600 Sobic003G410600--Sobic005G144600 Sobic001G177900 Sobic001G177900 Sobic003G410600--Sobic001G177900 Sobic003G410600--Sobic003G135400 Sobic003G314900 Sobic003G314900 Sobic003G410600--Sobic003G314900 Sobic007G168900 Sobic007G168900 Sobic003G410600--Sobic007G168900 Sobic010G008900 Sobic010G008900 Sobic003G410600--Sobic010G008900 Sobic001G029800 Sobic001G029800 Sobic003G410600--Sobic001G029800 Sobic007G113300--Sobic004G233700 Sobic002G218600 Sobic002G218600 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic001G304800 Sobic001G304800 Sobic007G113300--Sobic001G304800 Sobic007G113300--Sobic004G286700 Sobic010G067800 Sobic010G067800 Sobic007G113300--Sobic010G067800 Sobic010G103700 Sobic010G103700 Sobic007G113300--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic007G094400--Sobic010G277300 Sobic001G107200 Sobic001G107200 Sobic007G094400--Sobic001G107200 Sobic006G191700 Sobic006G191700 Sobic007G094400--Sobic006G191700 Sobic007G094400--Sobic004G286700 Sobic008G096200 Sobic008G096200 Sobic007G094400--Sobic008G096200 Sobic001G487200 Sobic001G487200 Sobic007G094400--Sobic001G487200 Sobic001G528600 Sobic001G528600 Sobic007G094400--Sobic001G528600 Sobic001G051300 Sobic001G051300 Sobic007G094400--Sobic001G051300 Sobic006G207400 Sobic006G207400 Sobic007G094400--Sobic006G207400 Sobic002G383100 Sobic002G383100 Sobic003G017500--Sobic002G383100 Sobic003G017500--Sobic001G051300 Sobic007G130900 Sobic007G130900 Sobic003G017500--Sobic007G130900 Sobic001G437500 Sobic001G437500 Sobic003G017500--Sobic001G437500 Sobic007G139500 Sobic007G139500 Sobic003G017500--Sobic007G139500 Sobic009G073400 Sobic009G073400 Sobic003G017500--Sobic009G073400 Sobic009G206500 Sobic009G206500 Sobic003G017500--Sobic009G206500 Sobic001G159800 Sobic001G159800 Sobic003G017500--Sobic001G159800 Sobic003G017500--Sobic003G410600 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic006G105600 Sobic006G105600 Sobic004G233700--Sobic006G105600 Sobic005G025900 Sobic005G025900 Sobic004G233700--Sobic005G025900 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic004G233700--Sobic005G144600 Sobic004G233700--Sobic007G113300 Sobic004G233700--Sobic007G168900 Sobic002G296000 Sobic002G296000 Sobic004G233700--Sobic002G296000 Sobic009G242501--Sobic003G420100 Sobic009G242501--Sobic009G021700 Sobic010G216600 Sobic010G216600 Sobic009G242501--Sobic010G216600 Sobic004G170900 Sobic004G170900 Sobic009G242501--Sobic004G170900 Sobic008G039800 Sobic008G039800 Sobic009G242501--Sobic008G039800 Sobic009G242501--Sobic007G208100 Sobic003G277200 Sobic003G277200 Sobic009G242501--Sobic003G277200 Sobic009G242501--Sobic004G233700 Sobic009G242501--Sobic003G013000 Sobic005G121700 Sobic005G121700 Sobic009G021700--Sobic005G121700 Sobic009G021700--Sobic009G242501 Sobic007G225400 Sobic007G225400 Sobic009G021700--Sobic007G225400 Sobic009G021700--Sobic007G208100 Sobic009G021700--Sobic003G420100 Sobic008G143000 Sobic008G143000 Sobic009G021700--Sobic008G143000 Sobic009G021700--Sobic004G170900 Sobic002G280300 Sobic002G280300 Sobic009G021700--Sobic002G280300 Sobic008G077300 Sobic008G077300 Sobic009G021700--Sobic008G077300
Octagon: transcription factors


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