Gene annotation
Transcriptome id Sobic.007G113300.3,Sobic.007G113300.1,Sobic.007G113300.2
Synonym Sb07g017590
Functional annotation BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed
UniProt A0A1Z5R9U2 , A0A1B6PHA1 , A0A1Z5R9B8
Pfam PF00560 PF00069 PF07714 PF13855 PF07714 PF00560 PF13855
Panther DB PTHR27000 PTHR27000:SF35
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0531Protein phosphatase 1, regulatory subunit, and related proteins
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity GO:0005515protein binding GO:0005515protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G24230 : Leucine-rich repeat protein kinase family protein
RAP-DB (Rice) LOC_Os08g17410.1 : BRASSINOSTEROID INSENSITIVE 1 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a030817
Brachypodium -
Barley HORVU5Hr1G056350.4 , HORVU5Hr1G056350.5 , HORVU5Hr1G056350.6 , HORVU5Hr1G056350.7 , HORVU5Hr1G056350.1 , HORVU5Hr1G056350.2 , HORVU5Hr1G056350.3 , HORVU5Hr1G056350.8
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.007G113300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G233700 glycosyl hydrolase family 3 protein, putative, expressed -
2 Sobic.002G218600 Disease resistance/zinc finger/chromosome condensation-like region protein, putative, expressed -
3 Sobic.008G100700 SSXT protein, putative, expressed -
4 Sobic.001G304800 expressed protein -
5 Sobic.004G286700 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.010G067800 integral membrane transporter family protein, putative, expressed -
7 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
8 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
9 Sobic.008G090000 oxysterol-binding protein, putative, expressed -
10 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
11 Sobic.004G263700 expressed protein -
12 Sobic.004G054000 expressed protein -
13 Sobic.010G144900 fiber protein Fb34, putative, expressed -
14 Sobic.009G214100 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
15 Sobic.001G228200 T-complex protein, putative, expressed K04077: groEL, chaperonin GroEL
16 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.010G151700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@extra-large G-protein-related, putative, expressed -
18 Sobic.001G260701 -(PubMedID : 26976818) -
19 Sobic.009G146250 - -
20 Sobic.001G261400 STRUBBELIG-RECEPTOR FAMILY 6 precursor, putative, expressed -


Gene co-expression network
sample Sobic007G113300 Sobic007G113300 Sobic004G233700 Sobic004G233700 Sobic007G113300--Sobic004G233700 Sobic002G218600 Sobic002G218600 Sobic007G113300--Sobic002G218600 Sobic008G100700 Sobic008G100700 Sobic007G113300--Sobic008G100700 Sobic001G304800 Sobic001G304800 Sobic007G113300--Sobic001G304800 Sobic004G286700 Sobic004G286700 Sobic007G113300--Sobic004G286700 Sobic010G067800 Sobic010G067800 Sobic007G113300--Sobic010G067800 Sobic010G103700 Sobic010G103700 Sobic007G113300--Sobic010G103700 Sobic003G179500 Sobic003G179500 Sobic007G113300--Sobic003G179500 Sobic008G090000 Sobic008G090000 Sobic007G113300--Sobic008G090000 Sobic009G208900 Sobic009G208900 Sobic004G233700--Sobic009G208900 Sobic006G105600 Sobic006G105600 Sobic004G233700--Sobic006G105600 Sobic005G025900 Sobic005G025900 Sobic004G233700--Sobic005G025900 Sobic003G420100 Sobic003G420100 Sobic004G233700--Sobic003G420100 Sobic002G142200 Sobic002G142200 Sobic004G233700--Sobic002G142200 Sobic005G144600 Sobic005G144600 Sobic004G233700--Sobic005G144600 Sobic004G233700--Sobic007G113300 Sobic007G168900 Sobic007G168900 Sobic004G233700--Sobic007G168900 Sobic002G296000 Sobic002G296000 Sobic004G233700--Sobic002G296000 Sobic004G263700 Sobic004G263700 Sobic002G218600--Sobic004G263700 Sobic001G261400 Sobic001G261400 Sobic002G218600--Sobic001G261400 Sobic009G146250 Sobic009G146250 Sobic002G218600--Sobic009G146250 Sobic002G218600--Sobic007G113300 Sobic002G230900 Sobic002G230900 Sobic002G218600--Sobic002G230900 Sobic006G120600 Sobic006G120600 Sobic002G218600--Sobic006G120600 Sobic002G218600--Sobic010G103700 Sobic002G218600--Sobic001G304800 Sobic002G218600--Sobic003G179500 Sobic008G100700--Sobic007G113300 Sobic004G082700 Sobic004G082700 Sobic008G100700--Sobic004G082700 Sobic008G100700--Sobic002G218600 Sobic001G532800 Sobic001G532800 Sobic008G100700--Sobic001G532800 Sobic002G303800 Sobic002G303800 Sobic008G100700--Sobic002G303800 Sobic001G397000 Sobic001G397000 Sobic008G100700--Sobic001G397000 Sobic010G191000 Sobic010G191000 Sobic008G100700--Sobic010G191000 Sobic007G218100 Sobic007G218100 Sobic008G100700--Sobic007G218100 Sobic008G100700--Sobic003G179500 Sobic001G304800--Sobic002G296000 Sobic002G286700 Sobic002G286700 Sobic001G304800--Sobic002G286700 Sobic008G083500 Sobic008G083500 Sobic001G304800--Sobic008G083500 Sobic009G101100 Sobic009G101100 Sobic001G304800--Sobic009G101100 Sobic001G304800--Sobic006G105600 Sobic001G304800--Sobic007G218100 Sobic003G246800 Sobic003G246800 Sobic001G304800--Sobic003G246800 Sobic001G304800--Sobic009G146250 Sobic006G124400 Sobic006G124400 Sobic001G304800--Sobic006G124400 Sobic004G286700--Sobic003G420100 Sobic001G468500 Sobic001G468500 Sobic004G286700--Sobic001G468500 Sobic003G410600 Sobic003G410600 Sobic004G286700--Sobic003G410600 Sobic004G286700--Sobic007G113300 Sobic007G094400 Sobic007G094400 Sobic004G286700--Sobic007G094400 Sobic003G017500 Sobic003G017500 Sobic004G286700--Sobic003G017500 Sobic004G286700--Sobic004G233700 Sobic009G242501 Sobic009G242501 Sobic004G286700--Sobic009G242501 Sobic009G021700 Sobic009G021700 Sobic004G286700--Sobic009G021700 Sobic009G206500 Sobic009G206500 Sobic010G067800--Sobic009G206500 Sobic010G067800--Sobic006G120600 Sobic002G191000 Sobic002G191000 Sobic010G067800--Sobic002G191000 Sobic001G144200 Sobic001G144200 Sobic010G067800--Sobic001G144200 Sobic007G139500 Sobic007G139500 Sobic010G067800--Sobic007G139500 Sobic004G270800 Sobic004G270800 Sobic010G067800--Sobic004G270800 Sobic009G087000 Sobic009G087000 Sobic010G067800--Sobic009G087000 Sobic010G067800--Sobic007G113300 Sobic004G119700 Sobic004G119700 Sobic010G067800--Sobic004G119700 Sobic003G183700 Sobic003G183700 Sobic010G103700--Sobic003G183700 Sobic010G103700--Sobic003G179500 Sobic010G103700--Sobic006G120600 Sobic006G195500 Sobic006G195500 Sobic010G103700--Sobic006G195500 Sobic006G051000 Sobic006G051000 Sobic010G103700--Sobic006G051000 Sobic010G103700--Sobic009G087000 Sobic010G147700 Sobic010G147700 Sobic010G103700--Sobic010G147700 Sobic006G116500 Sobic006G116500 Sobic010G103700--Sobic006G116500 Sobic004G355500 Sobic004G355500 Sobic010G103700--Sobic004G355500 Sobic003G179500--Sobic003G183700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic003G179500--Sobic005G144600 Sobic003G179500--Sobic010G147700 Sobic003G179500--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic003G179500--Sobic005G110535 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic006G275500 Sobic006G275500 Sobic008G090000--Sobic006G275500 Sobic003G147500 Sobic003G147500 Sobic008G090000--Sobic003G147500 Sobic006G084300 Sobic006G084300 Sobic008G090000--Sobic006G084300 Sobic006G016700 Sobic006G016700 Sobic008G090000--Sobic006G016700 Sobic008G090000--Sobic008G083500 Sobic008G090000--Sobic009G146250 Sobic002G168000 Sobic002G168000 Sobic008G090000--Sobic002G168000 Sobic009G188900 Sobic009G188900 Sobic008G090000--Sobic009G188900 Sobic002G362200 Sobic002G362200 Sobic008G090000--Sobic002G362200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.