Gene annotation
Transcriptome id Sobic.009G214100.1
Synonym HSP60-3A, Sb09g026970
Functional annotation T-complex protein, putative, expressed
UniProt C5YUU6
Pfam PF00118
Panther DB PTHR11353:SF85 PTHR11353
NCBI CDD -
KEGG Orthology K04077; groEL, chaperonin GroEL
Gene Ontology GO:0005524; ATP binding


Orthologs (automatic annotation)
TAIR AT3G13860 : heat shock protein 60-3A
RAP-DB (Rice) LOC_Os05g46290.1 : T-complex protein, putative, expressed
MaizeGDB (Corn) Zm00025a044404
Brachypodium KQK05139
Barley HORVU1Hr1G079910.9 , HORVU1Hr1G079910.8 , HORVU1Hr1G079910.5 , HORVU1Hr1G079910.4 , HORVU1Hr1G079910.7 , HORVU1Hr1G079910.6 , HORVU1Hr1G079910.1 , HORVU1Hr1G079910.3 , HORVU1Hr1G079910.2 , HORVU7Hr1G070740.1 , HORVU1Hr1G038680.17 , HORVU1Hr1G079910.11 , HORVU1Hr1G079910.10 , HORVU1Hr1G079910.13 , HORVU1Hr1G079910.12 , HORVU1Hr1G079910.15 , HORVU1Hr1G079910.14 , HORVU1Hr1G038680.11 , HORVU1Hr1G038680.6 , HORVU1Hr1G038680.7 , HORVU1Hr1G038680.4 , HORVU1Hr1G038680.5 , HORVU1Hr1G038680.2 , HORVU1Hr1G038680.3 , HORVU1Hr1G038680.1 , HORVU1Hr1G038680.13 , HORVU1Hr1G038680.8 , HORVU1Hr1G038680.9 , HORVU1Hr1G038680.18 , HORVU1Hr1G038680.19 , HORVU1Hr1G038680.14 , HORVU1Hr1G038680.15 , HORVU1Hr1G038680.16 , HORVU1Hr1G038680.10 , HORVU1Hr1G038680.12
Wheat TraesCS1B02G378000 , TraesCS1D02G365800 , TraesCS1A02G361400
Populus PNT46134 , PNT46133


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G179500 expressed protein K06676: BRRN1, BRN1, condensin complex subunit 2
2 Sobic.007G139500 phosphofructokinase, putative, expressed K00850: pfkA, 6-phosphofructokinase 1
3 Sobic.010G103700 POLA2 - Putative DNA polymerase alpha complex subunit, expressed K02321: DNA polymerase alpha subunit B
4 Sobic.002G303800 expressed protein -
5 Sobic.005G144600 kinesin motor domain containing protein, putative, expressed K11498: centromeric protein E
6 Sobic.010G051100 OsPDIL1-5 protein disulfide isomerase PDIL1-5, expressed K09580: PDIA1, protein disulfide-isomerase A1
7 Sobic.003G201000 WD domain, G-beta repeat domain containing protein, expressed -
8 Sobic.006G120600 AAA-type ATPase family protein, putative, expressed -
9 Sobic.008G127550 - -
10 Sobic.002G191000 STE_MEKK_ste11_MAP3K.2 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed -
11 Sobic.009G181500 Up-reguralion under heat(PubMedID : 24916767)@cyclin, putative, expressed -
12 Sobic.008G141200 DUF1336 domain containing protein, expressed -
13 Sobic.008G100700 SSXT protein, putative, expressed -
14 Sobic.010G147700 WD domain, G-beta repeat domain containing protein, expressed K11274: WDHD1, chromosome transmission fidelity protein 4
15 Sobic.003G412800 Candidate orthologue to the genomic region of wheat Hessian fy resistance gene H32(PubMedID : 28624908)@expressed protein -
16 Sobic.003G118100 EMB3013, putative, expressed K17545: serine/threonine-protein kinase ULK4
17 Sobic.009G206500 respiratory burst oxidase, putative, expressed K13447: respiratory burst oxidase
18 Sobic.009G189200 secretory carrier-associated membrane protein, putative, expressed -
19 Sobic.010G144900 fiber protein Fb34, putative, expressed -
20 Sobic.006G140100 TMS membrane protein/tumour differentially expressed protein, putative, expressed -


Gene co-expression network
sample Sobic009G214100 Sobic009G214100 Sobic003G179500 Sobic003G179500 Sobic009G214100--Sobic003G179500 Sobic007G139500 Sobic007G139500 Sobic009G214100--Sobic007G139500 Sobic010G103700 Sobic010G103700 Sobic009G214100--Sobic010G103700 Sobic002G303800 Sobic002G303800 Sobic009G214100--Sobic002G303800 Sobic005G144600 Sobic005G144600 Sobic009G214100--Sobic005G144600 Sobic010G051100 Sobic010G051100 Sobic009G214100--Sobic010G051100 Sobic003G201000 Sobic003G201000 Sobic009G214100--Sobic003G201000 Sobic006G120600 Sobic006G120600 Sobic009G214100--Sobic006G120600 Sobic008G127550 Sobic008G127550 Sobic009G214100--Sobic008G127550 Sobic003G183700 Sobic003G183700 Sobic003G179500--Sobic003G183700 Sobic003G179500--Sobic010G103700 Sobic010G105400 Sobic010G105400 Sobic003G179500--Sobic010G105400 Sobic003G179500--Sobic005G144600 Sobic010G147700 Sobic010G147700 Sobic003G179500--Sobic010G147700 Sobic009G087000 Sobic009G087000 Sobic003G179500--Sobic009G087000 Sobic005G110535 Sobic005G110535 Sobic003G179500--Sobic005G110535 Sobic006G116500 Sobic006G116500 Sobic003G179500--Sobic006G116500 Sobic004G047100 Sobic004G047100 Sobic003G179500--Sobic004G047100 Sobic001G196000 Sobic001G196000 Sobic007G139500--Sobic001G196000 Sobic001G051300 Sobic001G051300 Sobic007G139500--Sobic001G051300 Sobic009G206500 Sobic009G206500 Sobic007G139500--Sobic009G206500 Sobic001G437500 Sobic001G437500 Sobic007G139500--Sobic001G437500 Sobic007G139500--Sobic003G179500 Sobic001G103000 Sobic001G103000 Sobic007G139500--Sobic001G103000 Sobic003G017500 Sobic003G017500 Sobic007G139500--Sobic003G017500 Sobic002G191000 Sobic002G191000 Sobic007G139500--Sobic002G191000 Sobic007G139500--Sobic009G214100 Sobic010G103700--Sobic003G183700 Sobic010G103700--Sobic003G179500 Sobic010G103700--Sobic006G120600 Sobic006G195500 Sobic006G195500 Sobic010G103700--Sobic006G195500 Sobic006G051000 Sobic006G051000 Sobic010G103700--Sobic006G051000 Sobic010G103700--Sobic009G087000 Sobic010G103700--Sobic010G147700 Sobic010G103700--Sobic006G116500 Sobic004G355500 Sobic004G355500 Sobic010G103700--Sobic004G355500 Sobic003G444300 Sobic003G444300 Sobic002G303800--Sobic003G444300 Sobic002G303800--Sobic006G120600 Sobic001G169800 Sobic001G169800 Sobic002G303800--Sobic001G169800 Sobic002G303800--Sobic003G183700 Sobic002G303800--Sobic010G103700 Sobic001G146900 Sobic001G146900 Sobic002G303800--Sobic001G146900 Sobic002G303800--Sobic003G179500 Sobic002G303800--Sobic006G051000 Sobic001G083300 Sobic001G083300 Sobic002G303800--Sobic001G083300 Sobic007G168900 Sobic007G168900 Sobic005G144600--Sobic007G168900 Sobic005G144600--Sobic010G105400 Sobic003G294500 Sobic003G294500 Sobic005G144600--Sobic003G294500 Sobic005G000500 Sobic005G000500 Sobic005G144600--Sobic005G000500 Sobic003G314900 Sobic003G314900 Sobic005G144600--Sobic003G314900 Sobic001G177900 Sobic001G177900 Sobic005G144600--Sobic001G177900 Sobic005G144600--Sobic004G047100 Sobic004G271300 Sobic004G271300 Sobic005G144600--Sobic004G271300 Sobic005G144600--Sobic003G179500 Sobic009G181500 Sobic009G181500 Sobic010G051100--Sobic009G181500 Sobic010G051100--Sobic002G191000 Sobic006G035600 Sobic006G035600 Sobic010G051100--Sobic006G035600 Sobic004G053900 Sobic004G053900 Sobic010G051100--Sobic004G053900 Sobic003G118100 Sobic003G118100 Sobic010G051100--Sobic003G118100 Sobic002G113400 Sobic002G113400 Sobic010G051100--Sobic002G113400 Sobic010G051100--Sobic003G179500 Sobic002G246900 Sobic002G246900 Sobic010G051100--Sobic002G246900 Sobic010G191000 Sobic010G191000 Sobic010G051100--Sobic010G191000 Sobic003G201000--Sobic010G147700 Sobic003G369200 Sobic003G369200 Sobic003G201000--Sobic003G369200 Sobic003G201000--Sobic009G087000 Sobic003G201000--Sobic003G444300 Sobic003G201000--Sobic005G144600 Sobic010G054600 Sobic010G054600 Sobic003G201000--Sobic010G054600 Sobic006G029300 Sobic006G029300 Sobic003G201000--Sobic006G029300 Sobic002G290000 Sobic002G290000 Sobic003G201000--Sobic002G290000 Sobic003G201000--Sobic005G110535 Sobic006G120600--Sobic010G103700 Sobic006G120600--Sobic003G183700 Sobic006G120600--Sobic006G195500 Sobic006G120600--Sobic002G290000 Sobic006G120600--Sobic002G303800 Sobic006G120600--Sobic003G179500 Sobic007G125300 Sobic007G125300 Sobic006G120600--Sobic007G125300 Sobic006G120600--Sobic009G087000 Sobic006G120600--Sobic006G051000 Sobic003G420300 Sobic003G420300 Sobic008G127550--Sobic003G420300 Sobic002G320600 Sobic002G320600 Sobic008G127550--Sobic002G320600 Sobic003G226700 Sobic003G226700 Sobic008G127550--Sobic003G226700 Sobic006G281400 Sobic006G281400 Sobic008G127550--Sobic006G281400 Sobic003G292700 Sobic003G292700 Sobic008G127550--Sobic003G292700 Sobic008G127550--Sobic001G051300 Sobic004G243900 Sobic004G243900 Sobic008G127550--Sobic004G243900 Sobic008G127550--Sobic007G139500 Sobic009G052100 Sobic009G052100 Sobic008G127550--Sobic009G052100
Octagon: transcription factors


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