Gene annotation
| Transcriptome id | Sobic.006G213100.1 |
|---|---|
| Synonym | GlcNAc1pUT1, UDPGP, Sb06g028340 |
| Functional annotation | UDP-glucose Pyrophosphorylase (PubMedID : 26616172) UTP--glucose-1-phosphate uridylyltransferase, putative, expressed |
| UniProt | A0A1B6PN82 |
| Pfam | PF01704 |
| Panther DB | PTHR11952 PTHR11952:SF12 |
| NCBI CDD | - |
| KEGG Orthology | K00972; UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase |
| Gene Ontology | GO:0008152; metabolic process |
Orthologs (automatic annotation)
| TAIR | AT2G35020 : N-acetylglucosamine-1-phosphate uridylyltransferase 2 |
|---|---|
| RAP-DB (Rice) | LOC_Os04g52370.1 : UTP--glucose-1-phosphate uridylyltransferase, putative, expressed |
| MaizeGDB (Corn) | Zm00025a057013 , Zm00025a009812 |
| Brachypodium | KQJ84560 , KQJ95577 |
| Barley | HORVU5Hr1G052910.2 , HORVU5Hr1G052910.1 , HORVU6Hr1G084480.1 , HORVU6Hr1G084480.2 , HORVU6Hr1G084480.3 , HORVU2Hr1G099220.10 , HORVU2Hr1G099220.11 , HORVU2Hr1G099220.8 , HORVU2Hr1G099220.9 , HORVU2Hr1G099220.3 , HORVU2Hr1G099220.1 , HORVU2Hr1G099220.6 , HORVU2Hr1G099220.7 , HORVU2Hr1G099220.4 , HORVU2Hr1G099220.5 , HORVU2Hr1G099220.2 |
| Wheat | TraesCS2D02G421200 , TraesCS2D02G421200 , TraesCS2A02G423500 , TraesCS2A02G423500 , TraesCS2A02G423500 , TraesCS2B02G442900 , TraesCS2B02G442900 , TraesCS2B02G442900 , TraesCS2B02G442900 , TraesCS2B02G442900 |
| Populus | PNT54821 , PNT54822 , PNT54824 , PNT54823 |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G133600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein | - |
| 2 | Sobic.009G214600 | possible lysine decarboxylase domain containing protein, expressed | - |
| 3 | Sobic.003G397300 | - | - |
| 4 | Sobic.003G328800 | tubulin/FtsZ domain containing protein, putative, expressed | K07375: tubulin beta |
| 5 | Sobic.007G191100 | zinc finger DHHC domain-containing protein, putative, expressed | K16675: palmitoyltransferase ZDHHC9/14/18 |
| 6 | Sobic.001G056300 | BHLH transcription factor, putative, expressed | - |
| 7 | Sobic.003G044900 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA1 - Auxin-responsive Aux/IAA gene family member, expressed | K14484: auxin-responsive protein IAA |
| 8 | Sobic.004G220300 | "Phenylalanine ammonia-lyase, the MYB transcription factor binding domain AACG element"(PubMedID : 24045932)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phenylalanine ammonia-lyase, putative, expressed | K13064: phenylalanine/tyrosine ammonia-lyase |
| 9 | Sobic.007G099500 | hypothetical protein | - |
| 10 | Sobic.008G126200 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin binding protein, putative, expressed | - |
| 11 | Sobic.001G089100 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@periplasmic beta-glucosidase precursor, putative, expressed | K05349: beta-glucosidase |
| 12 | Sobic.002G221700 | microtubule associated protein, putative, expressed | K16732: protein regulator of cytokinesis 1 |
| 13 | Sobic.006G149101 | - | - |
| 14 | Sobic.006G130501 | - | - |
| 15 | Sobic.009G257300 | ELF3 protein, putative, expressed | K12125: protein EARLY FLOWERING 3 |
| 16 | Sobic.002G270300 | zinc RING finger protein, putative, expressed | K19045: E3 ubiquitin-protein ligase BIG BROTHER and related proteins |
| 17 | Sobic.004G240900 | "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, flower and stem, expression induced by IAA and BR treatments"(PubMedID : 20528920)@auxin efflux carrier component, putative, expressed | K13947: auxin efflux carrier family protein |
| 18 | Sobic.010G077600 | gb protein, putative, expressed | - |
| 19 | Sobic.005G012000 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Interacting factor of CBLs(PubMedID : 19860013)@CAMK_KIN1/SNF1/Nim1_like.6 - CAMK includes calcium/calmodulin depedent protein kinases, expressed | - |
| 20 | Sobic.004G143700 | protein phosphatase 2C, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
