Gene annotation
Transcriptome id Sobic.010G242900.4,Sobic.010G242900.1
Synonym
Functional annotation disease resistance protein RGA3, putative, expressed
UniProt A0A1W0VUL5 , A0A194YL95
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF563
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G14470 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os08g12740.2 : disease resistance protein RGA3, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat TraesCS7B02G333400
Populus -


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cDNA sequences
Sobic.010G242900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G215900 TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
2 Sobic.004G134100 glycosyltransferase, putative, expressed -
3 Sobic.002G168600 nucleobase-ascorbate transporter, putative, expressed K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
4 Sobic.009G013700 pectinacetylesterase domain containing protein, expressed -
5 Sobic.010G138500 lectin protein kinase family protein, putative, expressed -
6 Sobic.001G366800 alpha-N-acetylglucosaminidase, putative, expressed K01205: alpha-N-acetylglucosaminidase
7 Sobic.006G130501 - -
8 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
9 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
10 Sobic.009G246100 X8 domain containing protein, expressed -
11 Sobic.004G163300 protein kinase domain containing protein, expressed K14510: serine/threonine-protein kinase CTR1
12 Sobic.002G114800 CDPK - calcium-dependent protein kinase 18(PubMedID : 31721651)@CAMK_CAMK_like.32 - CAMK includes calcium/calmodulin depedent protein kinases, expressed K13412: calcium-dependent protein kinase
13 Sobic.010G045400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@AMP-binding enzyme, putative, expressed K01897: ACSL, long-chain acyl-CoA synthetase
14 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
15 Sobic.001G322000 pollen ankyrin, putative, expressed K19044: E3 ubiquitin-protein ligase XBAT32/33
16 Sobic.004G054000 expressed protein -
17 Sobic.008G004100 phosphatidate cytidylyltransferase, putative, expressed K15892: farnesol kinase
18 Sobic.009G213600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@green ripe-like, putative, expressed -
19 Sobic.006G033700 wax synthase isoform 1, putative, expressed -
20 Sobic.007G009000 expressed protein -


Gene co-expression network
sample Sobic010G242900 Sobic010G242900 Sobic001G215900 Sobic001G215900 Sobic010G242900--Sobic001G215900 Sobic004G134100 Sobic004G134100 Sobic010G242900--Sobic004G134100 Sobic002G168600 Sobic002G168600 Sobic010G242900--Sobic002G168600 Sobic009G013700 Sobic009G013700 Sobic010G242900--Sobic009G013700 Sobic010G138500 Sobic010G138500 Sobic010G242900--Sobic010G138500 Sobic001G366800 Sobic001G366800 Sobic010G242900--Sobic001G366800 Sobic006G130501 Sobic006G130501 Sobic010G242900--Sobic006G130501 Sobic004G247300 Sobic004G247300 Sobic010G242900--Sobic004G247300 Sobic006G098200 Sobic006G098200 Sobic010G242900--Sobic006G098200 Sobic001G215900--Sobic010G242900 Sobic001G215900--Sobic001G366800 Sobic001G215900--Sobic002G168600 Sobic001G215900--Sobic010G138500 Sobic001G215900--Sobic004G134100 Sobic001G215900--Sobic004G247300 Sobic001G215900--Sobic006G130501 Sobic001G215900--Sobic009G013700 Sobic009G133900 Sobic009G133900 Sobic001G215900--Sobic009G133900 Sobic009G026200 Sobic009G026200 Sobic004G134100--Sobic009G026200 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G006700 Sobic004G006700 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic004G134100--Sobic010G138500 Sobic004G134100--Sobic001G215900 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic002G168600--Sobic010G242900 Sobic002G168600--Sobic001G215900 Sobic002G168600--Sobic004G134100 Sobic002G168600--Sobic006G130501 Sobic002G168600--Sobic009G013700 Sobic002G168600--Sobic005G159600 Sobic002G168600--Sobic004G247300 Sobic005G054700 Sobic005G054700 Sobic002G168600--Sobic005G054700 Sobic008G086200 Sobic008G086200 Sobic002G168600--Sobic008G086200 Sobic009G030300 Sobic009G030300 Sobic009G013700--Sobic009G030300 Sobic008G008400 Sobic008G008400 Sobic009G013700--Sobic008G008400 Sobic006G033700 Sobic006G033700 Sobic009G013700--Sobic006G033700 Sobic009G013700--Sobic010G242900 Sobic009G013700--Sobic001G215900 Sobic001G226000 Sobic001G226000 Sobic009G013700--Sobic001G226000 Sobic003G347300 Sobic003G347300 Sobic009G013700--Sobic003G347300 Sobic009G013700--Sobic002G168600 Sobic002G218700 Sobic002G218700 Sobic009G013700--Sobic002G218700 Sobic010G138500--Sobic004G134100 Sobic010G138500--Sobic001G215900 Sobic010G217100 Sobic010G217100 Sobic010G138500--Sobic010G217100 Sobic010G138500--Sobic010G242900 Sobic010G138500--Sobic001G366800 Sobic001G222400 Sobic001G222400 Sobic010G138500--Sobic001G222400 Sobic002G143000 Sobic002G143000 Sobic010G138500--Sobic002G143000 Sobic002G319200 Sobic002G319200 Sobic010G138500--Sobic002G319200 Sobic004G104800 Sobic004G104800 Sobic010G138500--Sobic004G104800 Sobic009G055400 Sobic009G055400 Sobic001G366800--Sobic009G055400 Sobic001G366800--Sobic001G215900 Sobic002G301500 Sobic002G301500 Sobic001G366800--Sobic002G301500 Sobic001G366800--Sobic004G134100 Sobic006G177300 Sobic006G177300 Sobic001G366800--Sobic006G177300 Sobic001G366800--Sobic004G247300 Sobic002G393200 Sobic002G393200 Sobic001G366800--Sobic002G393200 Sobic001G366800--Sobic010G138500 Sobic001G366800--Sobic010G242900 Sobic006G130501--Sobic006G098200 Sobic006G130501--Sobic009G133900 Sobic007G020300 Sobic007G020300 Sobic006G130501--Sobic007G020300 Sobic006G213100 Sobic006G213100 Sobic006G130501--Sobic006G213100 Sobic006G130501--Sobic001G215900 Sobic006G130501--Sobic010G242900 Sobic006G130501--Sobic002G168600 Sobic009G102300 Sobic009G102300 Sobic006G130501--Sobic009G102300 Sobic006G130501--Sobic006G033700 Sobic004G247300--Sobic005G054700 Sobic001G514400 Sobic001G514400 Sobic004G247300--Sobic001G514400 Sobic009G175200 Sobic009G175200 Sobic004G247300--Sobic009G175200 Sobic002G034301 Sobic002G034301 Sobic004G247300--Sobic002G034301 Sobic004G247300--Sobic001G215900 Sobic009G099700 Sobic009G099700 Sobic004G247300--Sobic009G099700 Sobic004G247300--Sobic001G366800 Sobic004G247300--Sobic010G242900 Sobic004G247300--Sobic006G213100 Sobic006G098200--Sobic006G033700 Sobic006G098200--Sobic006G130501 Sobic003G154700 Sobic003G154700 Sobic006G098200--Sobic003G154700 Sobic001G347600 Sobic001G347600 Sobic006G098200--Sobic001G347600 Sobic001G359400 Sobic001G359400 Sobic006G098200--Sobic001G359400 Sobic001G467000 Sobic001G467000 Sobic006G098200--Sobic001G467000 Sobic006G098200--Sobic002G301500 Sobic007G191100 Sobic007G191100 Sobic006G098200--Sobic007G191100 Sobic010G274500 Sobic010G274500 Sobic006G098200--Sobic010G274500
Octagon: transcription factors


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