Gene annotation
Transcriptome id Sobic.003G366300.1
Synonym NEK6, ATNEK6, IBO1, Sb03g040800
Functional annotation protein kinase domain containing protein, expressed
UniProt A0A1B6Q754
Pfam PF00069
Panther DB PTHR24362 PTHR24362:SF258
NCBI CDD KOG0589; Serine/threonine protein kinase
KEGG Orthology K08857; NIMA (never in mitosis gene a)-related kinase 1/4/5
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT3G44200 : NIMA (never in mitosis, gene A)-related 6
RAP-DB (Rice) LOC_Os01g64490.1 : protein kinase domain containing protein, expressed
MaizeGDB (Corn) Zm00025a026731
Brachypodium PNT71170 , KQK10749 , KQK06032 , KQK06031
Barley HORVU3Hr1G083620.14 , HORVU3Hr1G083620.12 , HORVU3Hr1G083620.13 , HORVU3Hr1G083620.10 , HORVU3Hr1G083620.11 , HORVU3Hr1G083620.4 , HORVU3Hr1G083620.5 , HORVU3Hr1G083620.6 , HORVU3Hr1G083620.7 , HORVU3Hr1G083620.1 , HORVU3Hr1G083620.2 , HORVU3Hr1G083620.3 , HORVU3Hr1G083620.8 , HORVU3Hr1G083620.9
Wheat TraesCS1A02G275400 , TraesCS1B02G284600 , TraesCS1B02G284600 , TraesCS3B02G408800 , TraesCS3B02G408800 , TraesCS3B02G408800 , TraesCS3B02G408800 , TraesCS3D02G369100 , TraesCS3D02G369100 , TraesCS3A02G376300 , TraesCS3A02G376300 , TraesCS3A02G376300 , TraesCS1D02G275000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G270400 zinc finger, C3HC4 type domain containing protein, expressed -
2 Sobic.005G112000 P21-Rho-binding domain containing protein, putative, expressed -
3 Sobic.001G388000 GTPase-activating protein, putative, expressed -
4 Sobic.007G091900 ATP binding protein, putative, expressed -
5 Sobic.007G119500 expressed protein -
6 Sobic.005G110600 glycosyl hydrolase, putative, expressed K01183: chitinase
7 Sobic.003G099166 - -
8 Sobic.004G163600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
9 Sobic.003G198500 XIK, putative, expressed K10357: myosin V
10 Sobic.004G319600 polygalacturonase, putative, expressed -
11 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
12 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
13 Sobic.006G160900 NAC domain containing protein, putative, expressed -
14 Sobic.010G096100 ras-related protein, putative, expressed K04392: Ras-related C3 botulinum toxin substrate 1
15 Sobic.010G090500 expressed protein -
16 Sobic.001G402400 expressed protein -
17 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
18 Sobic.001G140800 helix-loop-helix DNA-binding protein, putative, expressed -
19 Sobic.009G026101 - -
20 Sobic.008G021900 nucleoside-triphosphatase, putative, expressed K14641: apyrase


Gene co-expression network
sample Sobic003G366300 Sobic003G366300 Sobic003G270400 Sobic003G270400 Sobic003G366300--Sobic003G270400 Sobic005G112000 Sobic005G112000 Sobic003G366300--Sobic005G112000 Sobic001G388000 Sobic001G388000 Sobic003G366300--Sobic001G388000 Sobic007G091900 Sobic007G091900 Sobic003G366300--Sobic007G091900 Sobic007G119500 Sobic007G119500 Sobic003G366300--Sobic007G119500 Sobic005G110600 Sobic005G110600 Sobic003G366300--Sobic005G110600 Sobic003G099166 Sobic003G099166 Sobic003G366300--Sobic003G099166 Sobic004G163600 Sobic004G163600 Sobic003G366300--Sobic004G163600 Sobic003G198500 Sobic003G198500 Sobic003G366300--Sobic003G198500 Sobic001G402400 Sobic001G402400 Sobic003G270400--Sobic001G402400 Sobic003G270400--Sobic007G119500 Sobic003G270400--Sobic003G366300 Sobic003G270400--Sobic007G091900 Sobic003G270400--Sobic005G112000 Sobic001G406700 Sobic001G406700 Sobic003G270400--Sobic001G406700 Sobic004G047600 Sobic004G047600 Sobic003G270400--Sobic004G047600 Sobic008G014700 Sobic008G014700 Sobic003G270400--Sobic008G014700 Sobic003G378800 Sobic003G378800 Sobic003G270400--Sobic003G378800 Sobic003G371400 Sobic003G371400 Sobic005G112000--Sobic003G371400 Sobic003G082700 Sobic003G082700 Sobic005G112000--Sobic003G082700 Sobic005G112000--Sobic001G388000 Sobic010G133932 Sobic010G133932 Sobic005G112000--Sobic010G133932 Sobic005G112000--Sobic003G270400 Sobic005G112000--Sobic003G366300 Sobic001G208600 Sobic001G208600 Sobic005G112000--Sobic001G208600 Sobic010G007000 Sobic010G007000 Sobic005G112000--Sobic010G007000 Sobic006G160900 Sobic006G160900 Sobic005G112000--Sobic006G160900 Sobic001G388000--Sobic010G133932 Sobic001G140800 Sobic001G140800 Sobic001G388000--Sobic001G140800 Sobic005G145100 Sobic005G145100 Sobic001G388000--Sobic005G145100 Sobic001G388000--Sobic005G112000 Sobic001G388000--Sobic003G366300 Sobic001G388000--Sobic005G110600 Sobic004G290300 Sobic004G290300 Sobic001G388000--Sobic004G290300 Sobic003G239100 Sobic003G239100 Sobic001G388000--Sobic003G239100 Sobic001G484000 Sobic001G484000 Sobic001G388000--Sobic001G484000 Sobic001G302300 Sobic001G302300 Sobic007G091900--Sobic001G302300 Sobic007G091900--Sobic003G270400 Sobic007G091900--Sobic007G119500 Sobic007G091900--Sobic003G366300 Sobic007G091900--Sobic001G406700 Sobic007G091900--Sobic004G047600 Sobic003G387500 Sobic003G387500 Sobic007G091900--Sobic003G387500 Sobic004G319600 Sobic004G319600 Sobic007G091900--Sobic004G319600 Sobic007G091900--Sobic003G378800 Sobic009G170500 Sobic009G170500 Sobic007G119500--Sobic009G170500 Sobic007G119500--Sobic003G270400 Sobic007G119500--Sobic004G047600 Sobic001G072600 Sobic001G072600 Sobic007G119500--Sobic001G072600 Sobic002G167600 Sobic002G167600 Sobic007G119500--Sobic002G167600 Sobic007G119500--Sobic003G378800 Sobic001G360700 Sobic001G360700 Sobic007G119500--Sobic001G360700 Sobic006G144600 Sobic006G144600 Sobic007G119500--Sobic006G144600 Sobic007G119500--Sobic001G406700 Sobic005G130700 Sobic005G130700 Sobic005G110600--Sobic005G130700 Sobic006G062300 Sobic006G062300 Sobic005G110600--Sobic006G062300 Sobic004G297950 Sobic004G297950 Sobic005G110600--Sobic004G297950 Sobic005G110600--Sobic001G140800 Sobic003G419600 Sobic003G419600 Sobic005G110600--Sobic003G419600 Sobic005G110600--Sobic010G133932 Sobic005G110600--Sobic010G007000 Sobic003G269100 Sobic003G269100 Sobic005G110600--Sobic003G269100 Sobic005G110600--Sobic001G484000 Sobic003G099166--Sobic001G208600 Sobic003G099166--Sobic001G484000 Sobic001G263900 Sobic001G263900 Sobic003G099166--Sobic001G263900 Sobic006G075000 Sobic006G075000 Sobic003G099166--Sobic006G075000 Sobic005G052500 Sobic005G052500 Sobic003G099166--Sobic005G052500 Sobic003G099166--Sobic003G082700 Sobic003G352700 Sobic003G352700 Sobic003G099166--Sobic003G352700 Sobic002G347300 Sobic002G347300 Sobic003G099166--Sobic002G347300 Sobic009G221900 Sobic009G221900 Sobic003G099166--Sobic009G221900 Sobic002G322300 Sobic002G322300 Sobic004G163600--Sobic002G322300 Sobic002G205500 Sobic002G205500 Sobic004G163600--Sobic002G205500 Sobic004G163600--Sobic003G366300 Sobic003G296400 Sobic003G296400 Sobic004G163600--Sobic003G296400 Sobic007G223600 Sobic007G223600 Sobic004G163600--Sobic007G223600 Sobic001G224300 Sobic001G224300 Sobic004G163600--Sobic001G224300 Sobic009G079100 Sobic009G079100 Sobic004G163600--Sobic009G079100 Sobic004G163600--Sobic001G406700 Sobic009G162500 Sobic009G162500 Sobic004G163600--Sobic009G162500 Sobic003G198500--Sobic009G079100 Sobic010G090500 Sobic010G090500 Sobic003G198500--Sobic010G090500 Sobic001G073150 Sobic001G073150 Sobic003G198500--Sobic001G073150 Sobic003G198500--Sobic003G366300 Sobic002G312700 Sobic002G312700 Sobic003G198500--Sobic002G312700 Sobic004G051300 Sobic004G051300 Sobic003G198500--Sobic004G051300 Sobic009G246700 Sobic009G246700 Sobic003G198500--Sobic009G246700 Sobic010G022400 Sobic010G022400 Sobic003G198500--Sobic010G022400 Sobic008G174800 Sobic008G174800 Sobic003G198500--Sobic008G174800
Octagon: transcription factors


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