Gene annotation
Transcriptome id Sobic.009G032600.1
Synonym Sb09g002740
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
peroxidase precursor, putative, expressed
UniProt C5YZI4
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF76
NCBI CDD -
KEGG Orthology K00430; peroxidase
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G11290 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os05g04380.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a054380 , Zm00025a021632 , Zm00025a055305 , Zm00025a000294 , Zm00025a038144 , Zm00025a044120
Brachypodium KQK23931 , KQK07964 , KQK04040 , KQK10120 , KQK04037 , KQK17328 , KQK05560
Barley HORVU4Hr1G016940.1 , HORVU4Hr1G016940.3 , HORVU1Hr1G066550.1 , HORVU3Hr1G077580.4 , HORVU3Hr1G077580.2 , HORVU1Hr1G066610.3 , HORVU1Hr1G066610.4 , HORVU7Hr1G102480.1 , HORVU7Hr1G102480.2 , HORVU7Hr1G102480.3 , HORVU7Hr1G102480.7 , HORVU1Hr1G066600.1 , HORVU7Hr1G108210.3 , HORVU7Hr1G108210.2 , HORVU7Hr1G108210.1 , HORVU7Hr1G108210.5 , HORVU7Hr1G108210.4 , HORVU1Hr1G016660.4 , HORVU1Hr1G016660.1 , HORVU1Hr1G016660.2 , HORVU1Hr1G016660.3 , HORVU3Hr1G077580.5 , HORVU1Hr1G066540.1
Wheat TraesCS1B02G330400 , TraesCS1B02G330400 , TraesCS1B02G330800 , TraesCS6B02G354600 , TraesCS1A02G318900 , TraesCS1A02G318700 , TraesCS7D02G420500 , TraesCS1D02G318200 , TraesCS1B02G330800 , TraesCS3B02G354000 , TraesCS1D02G318400 , TraesCS1A02G318000 , TraesCS7A02G474200 , TraesCS4D02G102600 , TraesCS3A02G325100 , TraesCS3A02G325100 , TraesCS4B02G105800 , TraesCS3D02G318500 , TraesCS1A02G318500 , TraesCS1B02G330500 , TraesCS6A02G081700 , TraesCS7A02G452900 , TraesCS1D02G318300 , TraesCS1D02G317800 , TraesCS1D02G317700 , TraesCS7A02G453000 , TraesCS1A02G318200 , TraesCS2D02G082100 , TraesCS1D02G079800 , TraesCS4D02G173000 , TraesCS2D02G036700 , TraesCS1B02G095800 , TraesCS2D02G153800 , TraesCS1D02G317900 , TraesCS7B02G375600 , TraesCS1A02G318400 , TraesCS7D02G442200 , TraesCS1D02G318700 , TraesCS4B02G340100 , TraesCSU02G134300 , TraesCS7A02G428200 , TraesCS1B02G330600 , TraesCS4B02G340200 , TraesCS7D02G442300 , TraesCS4D02G342600 , TraesCS6A02G324200 , TraesCS6B02G109000 , TraesCS6B02G109000 , TraesCS7B02G328400 , TraesCS1D02G318100 , TraesCS4B02G171000 , TraesCS1A02G317900 , TraesCS1A02G077700 , TraesCS1A02G077700 , TraesCS1A02G318600 , TraesCS1B02G330200 , TraesCS7D02G461200 , TraesCS6D02G303900 , TraesCS1A02G318300 , TraesCS1B02G330700 , TraesCS4A02G201700
Populus -


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cDNA sequences
Sobic.009G032600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G072200 expressed protein -
2 Sobic.010G086800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
4 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
5 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
6 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
7 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
8 Sobic.004G319600 polygalacturonase, putative, expressed -
9 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
10 Sobic.002G118700 -(PubMedID : 28944535)@CESA3 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
12 Sobic.001G334900 X8 domain containing protein, expressed -
13 Sobic.003G099166 - -
14 Sobic.004G007600 glycosyltransferase protein, putative, expressed -
15 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
16 Sobic.003G254700 glycosyltransferase family 43 protein, putative, expressed -
17 Sobic.006G038200 receptor protein kinase, putative, expressed -
18 Sobic.001G208600 receptor kinase like protein, putative, expressed -
19 Sobic.004G203900 oxidoreductase, short chain dehydrogenase/reductase family, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
20 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha


Gene co-expression network
sample Sobic009G032600 Sobic009G032600 Sobic002G072200 Sobic002G072200 Sobic009G032600--Sobic002G072200 Sobic010G086800 Sobic010G086800 Sobic009G032600--Sobic010G086800 Sobic004G168700 Sobic004G168700 Sobic009G032600--Sobic004G168700 Sobic003G062000 Sobic003G062000 Sobic009G032600--Sobic003G062000 Sobic009G232200 Sobic009G232200 Sobic009G032600--Sobic009G232200 Sobic009G226900 Sobic009G226900 Sobic009G032600--Sobic009G226900 Sobic006G075000 Sobic006G075000 Sobic009G032600--Sobic006G075000 Sobic004G319600 Sobic004G319600 Sobic009G032600--Sobic004G319600 Sobic006G036400 Sobic006G036400 Sobic009G032600--Sobic006G036400 Sobic002G072200--Sobic009G032600 Sobic002G072200--Sobic006G075000 Sobic002G072200--Sobic003G062000 Sobic002G072200--Sobic009G226900 Sobic002G072200--Sobic009G232200 Sobic002G072200--Sobic006G036400 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic010G086800--Sobic003G062000 Sobic010G086800--Sobic004G168700 Sobic010G086800--Sobic009G032600 Sobic010G086800--Sobic006G036400 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic009G162500 Sobic009G162500 Sobic010G086800--Sobic009G162500 Sobic004G168700--Sobic010G086800 Sobic004G168700--Sobic009G032600 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic009G211800 Sobic009G211800 Sobic004G168700--Sobic009G211800 Sobic004G168700--Sobic002G072200 Sobic004G243800 Sobic004G243800 Sobic004G168700--Sobic004G243800 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic001G224300 Sobic001G224300 Sobic003G062000--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200 Sobic001G334900 Sobic001G334900 Sobic009G232200--Sobic001G334900 Sobic002G347300 Sobic002G347300 Sobic009G232200--Sobic002G347300 Sobic002G338400 Sobic002G338400 Sobic009G232200--Sobic002G338400 Sobic006G278100 Sobic006G278100 Sobic009G232200--Sobic006G278100 Sobic009G232200--Sobic006G075000 Sobic009G232200--Sobic004G168700 Sobic009G232200--Sobic002G072200 Sobic009G232200--Sobic009G032600 Sobic002G252000 Sobic002G252000 Sobic009G232200--Sobic002G252000 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic009G226900--Sobic006G075000 Sobic010G096100 Sobic010G096100 Sobic006G075000--Sobic010G096100 Sobic006G075000--Sobic001G208600 Sobic001G484000 Sobic001G484000 Sobic006G075000--Sobic001G484000 Sobic006G075000--Sobic009G226900 Sobic006G075000--Sobic002G072200 Sobic006G075000--Sobic003G099166 Sobic003G352700 Sobic003G352700 Sobic006G075000--Sobic003G352700 Sobic009G026101 Sobic009G026101 Sobic006G075000--Sobic009G026101 Sobic006G075000--Sobic002G338400 Sobic004G007600 Sobic004G007600 Sobic004G319600--Sobic004G007600 Sobic004G319600--Sobic009G026101 Sobic004G319600--Sobic006G075000 Sobic007G091900 Sobic007G091900 Sobic004G319600--Sobic007G091900 Sobic004G111100 Sobic004G111100 Sobic004G319600--Sobic004G111100 Sobic007G047300 Sobic007G047300 Sobic004G319600--Sobic007G047300 Sobic004G319600--Sobic001G208600 Sobic002G075500 Sobic002G075500 Sobic004G319600--Sobic002G075500 Sobic003G254700 Sobic003G254700 Sobic004G319600--Sobic003G254700 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic001G409100 Sobic001G409100 Sobic006G036400--Sobic001G409100 Sobic009G034300 Sobic009G034300 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic001G360800 Sobic001G360800 Sobic006G036400--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic006G036400--Sobic004G221300
Octagon: transcription factors


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