Gene annotation
Transcriptome id Sobic.002G338400.1
Synonym Sb02g036300
Functional annotation uncharacterized secreted protein, putative, expressed
UniProt C5XBJ3
Pfam PF06764
Panther DB PTHR36057 PTHR36057:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G27350 : Protein of unknown function (DUF1223)
RAP-DB (Rice) LOC_Os07g37310.1 : uncharacterized secreted protein, putative, expressed
MaizeGDB (Corn) Zm00025a048376
Brachypodium KQK15773
Barley HORVU2Hr1G041110.1 , HORVU2Hr1G041110.2
Wheat TraesCS2D02G210400 , TraesCS2A02G205700 , TraesCS2B02G233000
Populus -


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cDNA sequences
Sobic.002G338400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G252000 CHIT13 - Chitinase family protein precursor, expressed -
2 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
3 Sobic.002G396400 uncharacterized GPI-anchored protein At5g19240 precursor, putative, expressed -
4 Sobic.002G128800 fiber protein Fb34, putative, expressed -
5 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
6 Sobic.006G278100 expressed protein -
7 Sobic.001G418100 NAD dependent epimerase/dehydratase family domain containing protein, expressed K08678: UXS1, UDP-glucuronate decarboxylase
8 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase
9 Sobic.006G038200 receptor protein kinase, putative, expressed -
10 Sobic.001G409100 glycosyltransferase family 43 protein, putative, expressed -
11 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
12 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
13 Sobic.007G090436 - K08235: xyloglucan:xyloglucosyl transferase
14 Sobic.009G215000 - -
15 Sobic.002G244300 fasciclin domain containing protein, expressed -
16 Sobic.002G053900 Cupin domain containing protein, expressed -
17 Sobic.001G012500 similar to Glutathione S transferase 1(PubMedID : 24655390)@"Glutathione S transferase 1, up-regulated under all the stress condition"(PubMedID : 24655390)@similar to Glutathione S transferase 1(PubMedID : 24655390)@Glutathione S transferase 1(PubMedID : 24655390)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
18 Sobic.001G035600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@induced by either light or pathogen inoculation in the BTx623 seedlings(PubMedID : 20529887)@"The bmr30 mutant harbors a mutation in a phenylpropanoid biosynthetic gene that is key to the interconnection between flavonoids and monolignols, both of which are utilized for lignin synthesis in the grasses."(PubMedID : 34925394)@expressed protein K01859: chalcone isomerase
19 Sobic.006G282300 - -
20 Sobic.005G112800 erythronate-4-phosphate dehydrogenase, putative, expressed K01251: E3.3.1.1, adenosylhomocysteinase


Gene co-expression network
sample Sobic002G338400 Sobic002G338400 Sobic002G252000 Sobic002G252000 Sobic002G338400--Sobic002G252000 Sobic009G232200 Sobic009G232200 Sobic002G338400--Sobic009G232200 Sobic002G396400 Sobic002G396400 Sobic002G338400--Sobic002G396400 Sobic002G128800 Sobic002G128800 Sobic002G338400--Sobic002G128800 Sobic006G075000 Sobic006G075000 Sobic002G338400--Sobic006G075000 Sobic006G278100 Sobic006G278100 Sobic002G338400--Sobic006G278100 Sobic001G418100 Sobic001G418100 Sobic002G338400--Sobic001G418100 Sobic002G347300 Sobic002G347300 Sobic002G338400--Sobic002G347300 Sobic006G038200 Sobic006G038200 Sobic002G338400--Sobic006G038200 Sobic002G252000--Sobic002G128800 Sobic002G252000--Sobic002G338400 Sobic002G252000--Sobic001G418100 Sobic002G252000--Sobic002G396400 Sobic006G156000 Sobic006G156000 Sobic002G252000--Sobic006G156000 Sobic001G038300 Sobic001G038300 Sobic002G252000--Sobic001G038300 Sobic001G107100 Sobic001G107100 Sobic002G252000--Sobic001G107100 Sobic003G443300 Sobic003G443300 Sobic002G252000--Sobic003G443300 Sobic003G219800 Sobic003G219800 Sobic002G252000--Sobic003G219800 Sobic001G334900 Sobic001G334900 Sobic009G232200--Sobic001G334900 Sobic009G232200--Sobic002G347300 Sobic009G232200--Sobic002G338400 Sobic009G232200--Sobic006G278100 Sobic009G232200--Sobic006G075000 Sobic004G168700 Sobic004G168700 Sobic009G232200--Sobic004G168700 Sobic002G072200 Sobic002G072200 Sobic009G232200--Sobic002G072200 Sobic009G032600 Sobic009G032600 Sobic009G232200--Sobic009G032600 Sobic009G232200--Sobic002G252000 Sobic002G396400--Sobic001G418100 Sobic002G396400--Sobic001G038300 Sobic001G475500 Sobic001G475500 Sobic002G396400--Sobic001G475500 Sobic001G409100 Sobic001G409100 Sobic002G396400--Sobic001G409100 Sobic002G396400--Sobic002G128800 Sobic009G232100 Sobic009G232100 Sobic002G396400--Sobic009G232100 Sobic002G154600 Sobic002G154600 Sobic002G396400--Sobic002G154600 Sobic009G181800 Sobic009G181800 Sobic002G396400--Sobic009G181800 Sobic009G088900 Sobic009G088900 Sobic002G396400--Sobic009G088900 Sobic002G128800--Sobic002G252000 Sobic007G150800 Sobic007G150800 Sobic002G128800--Sobic007G150800 Sobic002G128800--Sobic001G418100 Sobic002G128800--Sobic002G396400 Sobic002G128800--Sobic001G475500 Sobic010G052200 Sobic010G052200 Sobic002G128800--Sobic010G052200 Sobic002G128800--Sobic006G156000 Sobic002G128800--Sobic003G219800 Sobic002G128800--Sobic003G443300 Sobic010G096100 Sobic010G096100 Sobic006G075000--Sobic010G096100 Sobic001G208600 Sobic001G208600 Sobic006G075000--Sobic001G208600 Sobic001G484000 Sobic001G484000 Sobic006G075000--Sobic001G484000 Sobic009G226900 Sobic009G226900 Sobic006G075000--Sobic009G226900 Sobic006G075000--Sobic002G072200 Sobic003G099166 Sobic003G099166 Sobic006G075000--Sobic003G099166 Sobic003G352700 Sobic003G352700 Sobic006G075000--Sobic003G352700 Sobic009G026101 Sobic009G026101 Sobic006G075000--Sobic009G026101 Sobic006G075000--Sobic002G338400 Sobic006G278100--Sobic007G150800 Sobic006G278100--Sobic001G107100 Sobic006G278100--Sobic002G128800 Sobic003G250700 Sobic003G250700 Sobic006G278100--Sobic003G250700 Sobic006G278100--Sobic009G232200 Sobic006G278100--Sobic002G338400 Sobic003G122200 Sobic003G122200 Sobic006G278100--Sobic003G122200 Sobic006G191700 Sobic006G191700 Sobic006G278100--Sobic006G191700 Sobic001G261549 Sobic001G261549 Sobic006G278100--Sobic001G261549 Sobic001G418100--Sobic003G219800 Sobic005G112800 Sobic005G112800 Sobic001G418100--Sobic005G112800 Sobic001G418100--Sobic002G396400 Sobic001G418100--Sobic009G181800 Sobic001G418100--Sobic002G154600 Sobic001G514200 Sobic001G514200 Sobic001G418100--Sobic001G514200 Sobic001G418100--Sobic002G128800 Sobic001G418100--Sobic001G475500 Sobic008G055100 Sobic008G055100 Sobic001G418100--Sobic008G055100 Sobic001G012400 Sobic001G012400 Sobic002G347300--Sobic001G012400 Sobic001G012600 Sobic001G012600 Sobic002G347300--Sobic001G012600 Sobic002G347300--Sobic009G232200 Sobic002G347300--Sobic001G334900 Sobic002G347300--Sobic001G208600 Sobic009G221900 Sobic009G221900 Sobic002G347300--Sobic009G221900 Sobic002G347300--Sobic003G099166 Sobic002G053900 Sobic002G053900 Sobic002G347300--Sobic002G053900 Sobic002G347300--Sobic002G338400 Sobic003G170300 Sobic003G170300 Sobic006G038200--Sobic003G170300 Sobic004G282700 Sobic004G282700 Sobic006G038200--Sobic004G282700 Sobic006G038200--Sobic002G338400 Sobic010G264300 Sobic010G264300 Sobic006G038200--Sobic010G264300 Sobic008G178800 Sobic008G178800 Sobic006G038200--Sobic008G178800 Sobic009G017500 Sobic009G017500 Sobic006G038200--Sobic009G017500 Sobic003G216500 Sobic003G216500 Sobic006G038200--Sobic003G216500 Sobic001G035600 Sobic001G035600 Sobic006G038200--Sobic001G035600 Sobic006G038200--Sobic006G075000
Octagon: transcription factors


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