Gene annotation
Transcriptome id Sobic.009G215000.1
Synonym Sb09g027050
Functional annotation -
UniProt C5YUV6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) Zm00025a036466
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G053900 Cupin domain containing protein, expressed -
2 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
4 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
5 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.009G072800 proteophosphoglycan ppg4, putative, expressed -
7 Sobic.005G052500 "domain confirmed by Pfam database, expressed in leaf, stem and root, expression induced by BR and ABA treatments"(PubMedID : 20528920)@transmembrane amino acid transporter protein, putative, expressed K13946: AUX1, auxin influx carrier (AUX1 LAX family)
8 Sobic.001G208600 receptor kinase like protein, putative, expressed -
9 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
10 Sobic.001G261460 - -
11 Sobic.010G047600 plant protein of unknown function domain containing protein, expressed -
12 Sobic.002G244300 fasciclin domain containing protein, expressed -
13 Sobic.002G094600 "CESA6-like homologous to the Arabidopsis, up-regulated in addition of GA3"(PubMedID : 26198258)@"cellulose synthase A2, incorporate UDP-sugars into cellulose"(PubMedID : 28944535)@CESA6 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.001G190500 dirigent, putative, expressed -
15 Sobic.006G282300 - -
16 Sobic.010G101900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@endoglucanase, putative, expressed -
17 Sobic.002G338400 uncharacterized secreted protein, putative, expressed -
18 Sobic.002G270000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@BAG domain-containing protein, putative, expressed -
19 Sobic.003G239100 lipase class 3 family protein, putative, expressed -
20 Sobic.002G347300 copper methylamine oxidase precursor, putative, expressed K00276: AOC3, AOC2, primary-amine oxidase


Gene co-expression network
sample Sobic009G215000 Sobic009G215000 Sobic002G053900 Sobic002G053900 Sobic009G215000--Sobic002G053900 Sobic001G046800 Sobic001G046800 Sobic009G215000--Sobic001G046800 Sobic009G008800 Sobic009G008800 Sobic009G215000--Sobic009G008800 Sobic010G106700 Sobic010G106700 Sobic009G215000--Sobic010G106700 Sobic001G484000 Sobic001G484000 Sobic009G215000--Sobic001G484000 Sobic009G072800 Sobic009G072800 Sobic009G215000--Sobic009G072800 Sobic005G052500 Sobic005G052500 Sobic009G215000--Sobic005G052500 Sobic001G208600 Sobic001G208600 Sobic009G215000--Sobic001G208600 Sobic003G206700 Sobic003G206700 Sobic009G215000--Sobic003G206700 Sobic002G053900--Sobic001G046800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic002G053900--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic002G053900--Sobic010G047600 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic002G053900--Sobic009G215000 Sobic003G239100 Sobic003G239100 Sobic002G053900--Sobic003G239100 Sobic001G046800--Sobic010G047600 Sobic001G261460 Sobic001G261460 Sobic001G046800--Sobic001G261460 Sobic001G046800--Sobic010G106700 Sobic001G046800--Sobic002G053900 Sobic001G046800--Sobic009G008800 Sobic001G046800--Sobic001G484000 Sobic010G014400 Sobic010G014400 Sobic001G046800--Sobic010G014400 Sobic003G321400 Sobic003G321400 Sobic001G046800--Sobic003G321400 Sobic003G250700 Sobic003G250700 Sobic001G046800--Sobic003G250700 Sobic001G059500 Sobic001G059500 Sobic009G008800--Sobic001G059500 Sobic009G008800--Sobic010G106700 Sobic003G352700 Sobic003G352700 Sobic009G008800--Sobic003G352700 Sobic001G068500 Sobic001G068500 Sobic009G008800--Sobic001G068500 Sobic003G082700 Sobic003G082700 Sobic009G008800--Sobic003G082700 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic001G144800 Sobic001G144800 Sobic009G008800--Sobic001G144800 Sobic009G008800--Sobic003G206700 Sobic010G106700--Sobic001G046800 Sobic010G106700--Sobic009G008800 Sobic010G106700--Sobic002G053900 Sobic010G106700--Sobic010G047600 Sobic010G106700--Sobic001G059500 Sobic010G106700--Sobic003G352700 Sobic010G106700--Sobic001G261460 Sobic010G106700--Sobic001G068500 Sobic010G106700--Sobic003G082700 Sobic001G484000--Sobic005G052500 Sobic001G484000--Sobic001G046800 Sobic001G484000--Sobic003G352700 Sobic001G484000--Sobic002G053900 Sobic003G269100 Sobic003G269100 Sobic001G484000--Sobic003G269100 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic001G484000--Sobic009G008800 Sobic001G484000--Sobic003G239100 Sobic009G072800--Sobic001G190500 Sobic009G072800--Sobic002G053900 Sobic009G072800--Sobic001G046800 Sobic009G072800--Sobic009G215000 Sobic009G072800--Sobic001G068500 Sobic002G311501 Sobic002G311501 Sobic009G072800--Sobic002G311501 Sobic009G072800--Sobic001G261460 Sobic009G072800--Sobic009G008800 Sobic009G072800--Sobic003G250700 Sobic005G052500--Sobic001G484000 Sobic005G052500--Sobic001G046800 Sobic005G052500--Sobic003G269100 Sobic005G052500--Sobic010G106700 Sobic005G052500--Sobic010G047600 Sobic005G052500--Sobic003G352700 Sobic004G297950 Sobic004G297950 Sobic005G052500--Sobic004G297950 Sobic005G052500--Sobic002G053900 Sobic005G052500--Sobic003G321400 Sobic005G145100 Sobic005G145100 Sobic001G208600--Sobic005G145100 Sobic003G099166 Sobic003G099166 Sobic001G208600--Sobic003G099166 Sobic006G075000 Sobic006G075000 Sobic001G208600--Sobic006G075000 Sobic001G208600--Sobic003G239100 Sobic009G017500 Sobic009G017500 Sobic001G208600--Sobic009G017500 Sobic001G208600--Sobic002G053900 Sobic001G334900 Sobic001G334900 Sobic001G208600--Sobic001G334900 Sobic002G030800 Sobic002G030800 Sobic001G208600--Sobic002G030800 Sobic001G208600--Sobic003G352700 Sobic003G206700--Sobic001G059500 Sobic003G206700--Sobic001G144800 Sobic003G206700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic003G206700--Sobic003G368100 Sobic001G059600 Sobic001G059600 Sobic003G206700--Sobic001G059600 Sobic003G206700--Sobic001G068500 Sobic002G244300 Sobic002G244300 Sobic003G206700--Sobic002G244300 Sobic003G341500 Sobic003G341500 Sobic003G206700--Sobic003G341500 Sobic003G206700--Sobic001G046800
Octagon: transcription factors


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