Gene annotation
Transcriptome id Sobic.003G239100.1
Synonym Sb03g029630
Functional annotation lipase class 3 family protein, putative, expressed
UniProt A0A1B6Q514
Pfam PF01764
Panther DB PTHR31828 PTHR31828:SF6
NCBI CDD KOG4569; Predicted lipase
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT4G18550 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g46240.1 : lipase class 3 family protein, putative, expressed
MaizeGDB (Corn) Zm00025a028243
Brachypodium KQK08981
Barley HORVU3Hr1G058580.1 , HORVU3Hr1G058580.3 , HORVU3Hr1G058580.2 , HORVU3Hr1G058580.5 , HORVU3Hr1G058580.4
Wheat TraesCS3B02G264600 , TraesCS3A02G235300 , TraesCS3D02G235700
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G082700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
2 Sobic.009G008800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@xylem cysteine proteinase 2 precursor, putative, expressed K16290: xylem cysteine proteinase
3 Sobic.003G352700 similar to Putative laccase(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Laccase 17 LAC17 (At)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
4 Sobic.005G145100 phospholipase A2, putative, expressed -
5 Sobic.004G266700 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.005G127200 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.002G053900 Cupin domain containing protein, expressed -
8 Sobic.002G030800 app1, putative, expressed -
9 Sobic.001G484000 hydrolase, alpha/beta fold family protein, putative, expressed -
10 Sobic.001G068500 lysine-rich arabinogalactan protein 19 precursor, putative, expressed -
11 Sobic.001G059500 LTPL74 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.001G208600 receptor kinase like protein, putative, expressed -
13 Sobic.001G144800 LTPL72 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.001G046800 plastocyanin-like domain containing protein, putative, expressed -
15 Sobic.003G341500 lignin modification(PubMedID : 28529519)@laccase precursor protein, putative, expressed K05909: laccase
16 Sobic.010G106700 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
17 Sobic.006G160900 NAC domain containing protein, putative, expressed -
18 Sobic.001G250100 thaumatin, putative, expressed -
19 Sobic.003G206700 heavy metal-associated domain containing protein, expressed -
20 Sobic.002G030650 - -


Gene co-expression network
sample Sobic003G239100 Sobic003G239100 Sobic003G082700 Sobic003G082700 Sobic003G239100--Sobic003G082700 Sobic009G008800 Sobic009G008800 Sobic003G239100--Sobic009G008800 Sobic003G352700 Sobic003G352700 Sobic003G239100--Sobic003G352700 Sobic005G145100 Sobic005G145100 Sobic003G239100--Sobic005G145100 Sobic004G266700 Sobic004G266700 Sobic003G239100--Sobic004G266700 Sobic005G127200 Sobic005G127200 Sobic003G239100--Sobic005G127200 Sobic002G053900 Sobic002G053900 Sobic003G239100--Sobic002G053900 Sobic002G030800 Sobic002G030800 Sobic003G239100--Sobic002G030800 Sobic001G484000 Sobic001G484000 Sobic003G239100--Sobic001G484000 Sobic003G082700--Sobic003G352700 Sobic003G082700--Sobic003G239100 Sobic003G082700--Sobic009G008800 Sobic004G047600 Sobic004G047600 Sobic003G082700--Sobic004G047600 Sobic003G082700--Sobic001G484000 Sobic006G160900 Sobic006G160900 Sobic003G082700--Sobic006G160900 Sobic003G426200 Sobic003G426200 Sobic003G082700--Sobic003G426200 Sobic001G471800 Sobic001G471800 Sobic003G082700--Sobic001G471800 Sobic001G068500 Sobic001G068500 Sobic003G082700--Sobic001G068500 Sobic001G059500 Sobic001G059500 Sobic009G008800--Sobic001G059500 Sobic010G106700 Sobic010G106700 Sobic009G008800--Sobic010G106700 Sobic009G008800--Sobic003G352700 Sobic009G008800--Sobic001G068500 Sobic009G008800--Sobic003G082700 Sobic001G046800 Sobic001G046800 Sobic009G008800--Sobic001G046800 Sobic009G008800--Sobic003G239100 Sobic001G144800 Sobic001G144800 Sobic009G008800--Sobic001G144800 Sobic003G206700 Sobic003G206700 Sobic009G008800--Sobic003G206700 Sobic003G352700--Sobic003G082700 Sobic003G352700--Sobic004G047600 Sobic003G352700--Sobic009G008800 Sobic003G352700--Sobic003G239100 Sobic003G352700--Sobic001G068500 Sobic003G352700--Sobic001G484000 Sobic003G352700--Sobic001G059500 Sobic003G352700--Sobic005G127200 Sobic007G047300 Sobic007G047300 Sobic003G352700--Sobic007G047300 Sobic002G028500 Sobic002G028500 Sobic005G145100--Sobic002G028500 Sobic001G208600 Sobic001G208600 Sobic005G145100--Sobic001G208600 Sobic005G145100--Sobic003G239100 Sobic004G290300 Sobic004G290300 Sobic005G145100--Sobic004G290300 Sobic001G129600 Sobic001G129600 Sobic005G145100--Sobic001G129600 Sobic005G145100--Sobic004G266700 Sobic001G140800 Sobic001G140800 Sobic005G145100--Sobic001G140800 Sobic001G388000 Sobic001G388000 Sobic005G145100--Sobic001G388000 Sobic005G145100--Sobic001G144800 Sobic004G266700--Sobic005G127200 Sobic003G341500 Sobic003G341500 Sobic004G266700--Sobic003G341500 Sobic004G266700--Sobic001G144800 Sobic004G266700--Sobic001G068500 Sobic010G093300 Sobic010G093300 Sobic004G266700--Sobic010G093300 Sobic004G266700--Sobic009G008800 Sobic003G368100 Sobic003G368100 Sobic004G266700--Sobic003G368100 Sobic004G266700--Sobic003G239100 Sobic001G059600 Sobic001G059600 Sobic004G266700--Sobic001G059600 Sobic005G127200--Sobic010G093300 Sobic005G127200--Sobic004G266700 Sobic005G127200--Sobic001G068500 Sobic005G127200--Sobic002G030800 Sobic005G127200--Sobic003G341500 Sobic005G127200--Sobic001G059600 Sobic002G030650 Sobic002G030650 Sobic005G127200--Sobic002G030650 Sobic001G413700 Sobic001G413700 Sobic005G127200--Sobic001G413700 Sobic005G127200--Sobic003G368100 Sobic002G053900--Sobic001G046800 Sobic009G072800 Sobic009G072800 Sobic002G053900--Sobic009G072800 Sobic002G053900--Sobic009G008800 Sobic002G053900--Sobic010G106700 Sobic010G047600 Sobic010G047600 Sobic002G053900--Sobic010G047600 Sobic002G053900--Sobic001G484000 Sobic001G190500 Sobic001G190500 Sobic002G053900--Sobic001G190500 Sobic009G215000 Sobic009G215000 Sobic002G053900--Sobic009G215000 Sobic002G053900--Sobic003G239100 Sobic002G030800--Sobic005G127200 Sobic002G030800--Sobic010G093300 Sobic002G030800--Sobic001G068500 Sobic002G030800--Sobic001G471800 Sobic002G030800--Sobic001G413700 Sobic001G250100 Sobic001G250100 Sobic002G030800--Sobic001G250100 Sobic002G030800--Sobic003G239100 Sobic002G030800--Sobic001G059600 Sobic006G224500 Sobic006G224500 Sobic002G030800--Sobic006G224500 Sobic005G052500 Sobic005G052500 Sobic001G484000--Sobic005G052500 Sobic001G484000--Sobic001G046800 Sobic001G484000--Sobic003G352700 Sobic001G484000--Sobic002G053900 Sobic003G269100 Sobic003G269100 Sobic001G484000--Sobic003G269100 Sobic001G484000--Sobic003G082700 Sobic002G094600 Sobic002G094600 Sobic001G484000--Sobic002G094600 Sobic001G484000--Sobic009G008800 Sobic001G484000--Sobic003G239100
Octagon: transcription factors


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