Gene annotation
Transcriptome id Sobic.010G086800.2,Sobic.010G086800.3
Synonym UCC3, Sb10g007520
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
plastocyanin-like domain containing protein, putative, expressed
UniProt C5Z6W2
Pfam PF02298
Panther DB PTHR33021 PTHR33021:SF64
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009055; electron transfer activity


Orthologs (automatic annotation)
TAIR AT2G32300 : uclacyanin 1
RAP-DB (Rice) LOC_Os06g11490.1 : plastocyanin-like domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a042532
Brachypodium -
Barley HORVU7Hr1G036390.1
Wheat -
Populus -


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cDNA sequences
Sobic.010G086800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G062000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -
2 Sobic.004G168700 harpin-induced protein 1 domain containing protein, expressed -
3 Sobic.009G032600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
6 Sobic.003G427900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Cupin domain containing protein, expressed -
7 Sobic.002G072200 expressed protein -
8 Sobic.001G107100 "SRS5(Ortholog in rice:Segami, 2012)"(PubMedID : 31659833)@tubulin/FtsZ domain containing protein, putative, expressed K07374: tubulin alpha
9 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase
10 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
11 Sobic.008G164900 membrane associated DUF588 domain containing protein, putative, expressed -
12 Sobic.003G386200 zinc finger, C3HC4 type domain containing protein, expressed -
13 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
14 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.001G038300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
16 Sobic.006G075000 Late embryogenesis abundant hydroxyproline-rich glycoprotein("PubMedID : 26759170,PubMedID : 24597475")@harpin-induced protein 1 domain containing protein, expressed -
17 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
18 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
19 Sobic.006G001000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@cytochrome P450 93A2, putative, expressed -
20 Sobic.009G232200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@fasciclin domain containing protein, expressed -


Gene co-expression network
sample Sobic010G086800 Sobic010G086800 Sobic003G062000 Sobic003G062000 Sobic010G086800--Sobic003G062000 Sobic004G168700 Sobic004G168700 Sobic010G086800--Sobic004G168700 Sobic009G032600 Sobic009G032600 Sobic010G086800--Sobic009G032600 Sobic006G036400 Sobic006G036400 Sobic010G086800--Sobic006G036400 Sobic009G226900 Sobic009G226900 Sobic010G086800--Sobic009G226900 Sobic003G427900 Sobic003G427900 Sobic010G086800--Sobic003G427900 Sobic002G072200 Sobic002G072200 Sobic010G086800--Sobic002G072200 Sobic001G107100 Sobic001G107100 Sobic010G086800--Sobic001G107100 Sobic009G162500 Sobic009G162500 Sobic010G086800--Sobic009G162500 Sobic003G062000--Sobic009G226900 Sobic003G062000--Sobic006G036400 Sobic003G062000--Sobic010G086800 Sobic001G224300 Sobic001G224300 Sobic003G062000--Sobic001G224300 Sobic003G296400 Sobic003G296400 Sobic003G062000--Sobic003G296400 Sobic003G062000--Sobic002G072200 Sobic006G075000 Sobic006G075000 Sobic003G062000--Sobic006G075000 Sobic003G062000--Sobic009G032600 Sobic003G386200 Sobic003G386200 Sobic003G062000--Sobic003G386200 Sobic004G168700--Sobic010G086800 Sobic004G168700--Sobic009G032600 Sobic009G232200 Sobic009G232200 Sobic004G168700--Sobic009G232200 Sobic008G082400 Sobic008G082400 Sobic004G168700--Sobic008G082400 Sobic009G211800 Sobic009G211800 Sobic004G168700--Sobic009G211800 Sobic004G168700--Sobic002G072200 Sobic004G243800 Sobic004G243800 Sobic004G168700--Sobic004G243800 Sobic004G168700--Sobic009G226900 Sobic003G108000 Sobic003G108000 Sobic004G168700--Sobic003G108000 Sobic009G032600--Sobic002G072200 Sobic009G032600--Sobic010G086800 Sobic009G032600--Sobic004G168700 Sobic009G032600--Sobic003G062000 Sobic009G032600--Sobic009G232200 Sobic009G032600--Sobic009G226900 Sobic009G032600--Sobic006G075000 Sobic004G319600 Sobic004G319600 Sobic009G032600--Sobic004G319600 Sobic009G032600--Sobic006G036400 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic006G036400--Sobic003G062000 Sobic002G205500 Sobic002G205500 Sobic006G036400--Sobic002G205500 Sobic001G409100 Sobic001G409100 Sobic006G036400--Sobic001G409100 Sobic009G034300 Sobic009G034300 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic001G360800 Sobic001G360800 Sobic006G036400--Sobic001G360800 Sobic004G221300 Sobic004G221300 Sobic006G036400--Sobic004G221300 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic009G226900--Sobic006G075000 Sobic003G352800 Sobic003G352800 Sobic003G427900--Sobic003G352800 Sobic003G427900--Sobic010G086800 Sobic003G427900--Sobic003G296400 Sobic006G066500 Sobic006G066500 Sobic003G427900--Sobic006G066500 Sobic003G427900--Sobic009G226900 Sobic001G468300 Sobic001G468300 Sobic003G427900--Sobic001G468300 Sobic003G427900--Sobic006G036400 Sobic003G427900--Sobic003G386200 Sobic003G427900--Sobic003G062000 Sobic002G072200--Sobic009G032600 Sobic002G072200--Sobic006G075000 Sobic002G072200--Sobic003G062000 Sobic002G072200--Sobic009G226900 Sobic002G072200--Sobic009G232200 Sobic002G072200--Sobic006G036400 Sobic002G072200--Sobic010G086800 Sobic001G208600 Sobic001G208600 Sobic002G072200--Sobic001G208600 Sobic003G099166 Sobic003G099166 Sobic002G072200--Sobic003G099166 Sobic001G038300 Sobic001G038300 Sobic001G107100--Sobic001G038300 Sobic003G250700 Sobic003G250700 Sobic001G107100--Sobic003G250700 Sobic002G396400 Sobic002G396400 Sobic001G107100--Sobic002G396400 Sobic001G107200 Sobic001G107200 Sobic001G107100--Sobic001G107200 Sobic002G333800 Sobic002G333800 Sobic001G107100--Sobic002G333800 Sobic002G252000 Sobic002G252000 Sobic001G107100--Sobic002G252000 Sobic006G278100 Sobic006G278100 Sobic001G107100--Sobic006G278100 Sobic001G156500 Sobic001G156500 Sobic001G107100--Sobic001G156500 Sobic007G090436 Sobic007G090436 Sobic001G107100--Sobic007G090436 Sobic009G162500--Sobic003G296400 Sobic009G162500--Sobic002G205500 Sobic009G162500--Sobic003G062000 Sobic003G151300 Sobic003G151300 Sobic009G162500--Sobic003G151300 Sobic002G003200 Sobic002G003200 Sobic009G162500--Sobic002G003200 Sobic003G366300 Sobic003G366300 Sobic009G162500--Sobic003G366300 Sobic001G535400 Sobic001G535400 Sobic009G162500--Sobic001G535400 Sobic009G153800 Sobic009G153800 Sobic009G162500--Sobic009G153800 Sobic009G162500--Sobic009G032600
Octagon: transcription factors


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