Gene annotation
Transcriptome id Sobic.002G205500.1
Synonym MUR10, Sb02g025020, ATCESA7, IRX3, CESA7
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
CESA9 - cellulose synthase, expressed
UniProt C5XCX3
Pfam PF13632 PF14569
Panther DB PTHR13301 PTHR13301:SF28
NCBI CDD -
KEGG Orthology K10999; cellulose synthase A
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G17420 : Cellulose synthase family protein
RAP-DB (Rice) LOC_Os09g25490.1 : CESA9 - cellulose synthase, expressed
MaizeGDB (Corn) Zm00025a045374 , Zm00025a032075 , Zm00025a057237 , Zm00025a045530 , Zm00025a009576 , Zm00025a042252 , Zm00025a006680 , Zm00025a013935 , Zm00025a047054 , Zm00025a013593 , Zm00025a008673 , Zm00025a013415 , Zm00025a003543 , Zm00025a013618 , Zm00025a045761 , Zm00025a042242
Brachypodium PNT73945 , PNT73946 , KQK20392 , KQK12260 , KQK12261 , KQK12572 , KQK12573 , KQK12571 , PNT75244 , KQJ97023 , PNT64610 , KQK16504 , KQK16503 , KQK16502 , KQK16501 , PNT75245 , PNT75246 , KQJ86377
Barley HORVU1Hr1G039250.10 , HORVU1Hr1G039250.11 , HORVU1Hr1G039250.12 , HORVU1Hr1G039250.13 , HORVU1Hr1G039250.14 , HORVU1Hr1G039250.15 , HORVU1Hr1G039250.16 , HORVU1Hr1G039250.17 , HORVU1Hr1G039250.18 , HORVU1Hr1G039250.19 , HORVU5Hr1G064230.8 , HORVU5Hr1G064230.9 , HORVU5Hr1G064230.2 , HORVU5Hr1G064230.3 , HORVU5Hr1G064230.1 , HORVU5Hr1G064230.6 , HORVU5Hr1G064230.7 , HORVU5Hr1G064230.4 , HORVU5Hr1G064230.5 , HORVU1Hr1G039250.2 , HORVU1Hr1G039250.3 , HORVU1Hr1G039250.1 , HORVU1Hr1G039250.6 , HORVU1Hr1G039250.7 , HORVU1Hr1G039250.4 , HORVU1Hr1G039250.5 , HORVU1Hr1G039250.8 , HORVU1Hr1G039250.9 , HORVU6Hr1G050750.1 , HORVU6Hr1G050750.3 , HORVU6Hr1G050750.2 , HORVU6Hr1G050750.5 , HORVU6Hr1G050750.4 , HORVU6Hr1G050750.7 , HORVU6Hr1G050750.6 , HORVU6Hr1G050750.9 , HORVU6Hr1G050750.8 , HORVU6Hr1G050750.20 , HORVU6Hr1G050750.21 , HORVU6Hr1G050750.22 , HORVU5Hr1G064230.18 , HORVU5Hr1G064230.19 , HORVU5Hr1G064230.10 , HORVU5Hr1G064230.11 , HORVU5Hr1G064230.12 , HORVU5Hr1G064230.13 , HORVU5Hr1G064230.14 , HORVU5Hr1G064230.15 , HORVU5Hr1G064230.16 , HORVU5Hr1G064230.17 , HORVU7Hr1G081850.1 , HORVU7Hr1G081850.3 , HORVU7Hr1G081850.5 , HORVU7Hr1G081850.4 , HORVU7Hr1G081850.7 , HORVU7Hr1G081850.6 , HORVU1Hr1G039250.25 , HORVU1Hr1G039250.24 , HORVU1Hr1G039250.27 , HORVU1Hr1G039250.26 , HORVU1Hr1G039250.21 , HORVU1Hr1G039250.20 , HORVU1Hr1G039250.23 , HORVU1Hr1G039250.22 , HORVU1Hr1G039250.29 , HORVU1Hr1G039250.28 , HORVU3Hr1G071770.22 , HORVU3Hr1G071770.23 , HORVU3Hr1G071770.20 , HORVU3Hr1G071770.21 , HORVU6Hr1G050750.15 , HORVU6Hr1G050750.14 , HORVU6Hr1G050750.17 , HORVU6Hr1G050750.16 , HORVU6Hr1G050750.11 , HORVU6Hr1G050750.10 , HORVU6Hr1G050750.13 , HORVU6Hr1G050750.12 , HORVU6Hr1G050750.19 , HORVU6Hr1G050750.18 , HORVU3Hr1G071770.19 , HORVU3Hr1G071770.18 , HORVU3Hr1G071770.17 , HORVU3Hr1G071770.16 , HORVU3Hr1G071770.15 , HORVU3Hr1G071770.14 , HORVU3Hr1G071770.13 , HORVU3Hr1G071770.12 , HORVU3Hr1G071770.11 , HORVU3Hr1G071770.10 , HORVU5Hr1G064230.21 , HORVU5Hr1G064230.20 , HORVU5Hr1G064230.22 , HORVU1Hr1G039250.30 , HORVU1Hr1G039250.31 , HORVU3Hr1G071770.7 , HORVU3Hr1G071770.6 , HORVU3Hr1G071770.5 , HORVU3Hr1G071770.4 , HORVU3Hr1G071770.3 , HORVU3Hr1G071770.2 , HORVU3Hr1G071770.1 , HORVU3Hr1G071770.9 , HORVU3Hr1G071770.8
Wheat TraesCS2A02G102600 , TraesCS3B02G324500 , TraesCS2D02G102100 , TraesCS2D02G102100 , TraesCS2D02G102100 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS5B02G221600 , TraesCS7A02G033100 , TraesCS2B02G119700 , TraesCS2B02G119700 , TraesCS2B02G119700 , TraesCS4A02G456300 , TraesCS1A02G149300 , TraesCS1B02G167200 , TraesCS5A02G222500 , TraesCS1D02G146600 , TraesCS1D02G146600 , TraesCS7D02G029700 , TraesCS5D02G230300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
2 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
3 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
4 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
5 Sobic.005G229100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@leaf senescence related protein, putative, expressed -
6 Sobic.003G387500 IQ calmodulin-binding motif domain containing protein, expressed -
7 Sobic.009G048000 villin, putative, expressed K08017: advillin
8 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
9 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
10 Sobic.003G236701 - -
11 Sobic.001G406700 expressed protein -
12 Sobic.006G144600 ARPC2B, putative, expressed K05758: actin related protein 2/3 complex, subunit 2
13 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
14 Sobic.010G232500 peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.006G066500 expressed protein -
16 Sobic.003G112200 Cupin domain containing protein, expressed -
17 Sobic.001G336700 "Involved in secondary cell wall formation. Reduced mechanical strength in culms and leaves, thinner cell walls, reduced cellulose content, increased lignin content, in the mutant. The highest gene expression level in culms. The highest expression levels in vascular bundles and in sub-epidermal regions, where developing sclerenchyma cells are located."(PubMedID : 30590744)@COBRA-like protein precursor, putative, expressed -
18 Sobic.008G059800 expressed protein -
19 Sobic.001G399200 kinesin motor domain containing protein, expressed K10406: kinesin family member C2/C3
20 Sobic.009G162500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed K05280: flavonoid 3'-monooxygenase


Gene co-expression network
sample Sobic002G205500 Sobic002G205500 Sobic003G296400 Sobic003G296400 Sobic002G205500--Sobic003G296400 Sobic001G224300 Sobic001G224300 Sobic002G205500--Sobic001G224300 Sobic007G223600 Sobic007G223600 Sobic002G205500--Sobic007G223600 Sobic006G226200 Sobic006G226200 Sobic002G205500--Sobic006G226200 Sobic005G229100 Sobic005G229100 Sobic002G205500--Sobic005G229100 Sobic003G387500 Sobic003G387500 Sobic002G205500--Sobic003G387500 Sobic009G048000 Sobic009G048000 Sobic002G205500--Sobic009G048000 Sobic006G036400 Sobic006G036400 Sobic002G205500--Sobic006G036400 Sobic009G226900 Sobic009G226900 Sobic002G205500--Sobic009G226900 Sobic003G296400--Sobic002G205500 Sobic003G296400--Sobic001G224300 Sobic003G296400--Sobic006G036400 Sobic003G296400--Sobic007G223600 Sobic003G296400--Sobic006G226200 Sobic003G296400--Sobic009G226900 Sobic003G296400--Sobic009G048000 Sobic004G221300 Sobic004G221300 Sobic003G296400--Sobic004G221300 Sobic003G236701 Sobic003G236701 Sobic003G296400--Sobic003G236701 Sobic001G224300--Sobic003G296400 Sobic001G224300--Sobic002G205500 Sobic001G224300--Sobic006G036400 Sobic001G224300--Sobic003G387500 Sobic001G224300--Sobic009G226900 Sobic001G224300--Sobic007G223600 Sobic009G034300 Sobic009G034300 Sobic001G224300--Sobic009G034300 Sobic001G224300--Sobic004G221300 Sobic001G409100 Sobic001G409100 Sobic001G224300--Sobic001G409100 Sobic002G164600 Sobic002G164600 Sobic007G223600--Sobic002G164600 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic007G223600--Sobic003G236701 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic006G066500 Sobic006G066500 Sobic007G223600--Sobic006G066500 Sobic007G223600--Sobic001G224300 Sobic008G059800 Sobic008G059800 Sobic007G223600--Sobic008G059800 Sobic006G226200--Sobic003G236701 Sobic006G226200--Sobic006G066500 Sobic006G226200--Sobic007G223600 Sobic003G112200 Sobic003G112200 Sobic006G226200--Sobic003G112200 Sobic006G226200--Sobic002G164600 Sobic006G226200--Sobic003G296400 Sobic006G226200--Sobic009G048000 Sobic003G231500 Sobic003G231500 Sobic006G226200--Sobic003G231500 Sobic006G226200--Sobic002G205500 Sobic005G229100--Sobic007G223600 Sobic010G232500 Sobic010G232500 Sobic005G229100--Sobic010G232500 Sobic005G229100--Sobic002G205500 Sobic006G144600 Sobic006G144600 Sobic005G229100--Sobic006G144600 Sobic001G406700 Sobic001G406700 Sobic005G229100--Sobic001G406700 Sobic005G229100--Sobic002G164600 Sobic005G229100--Sobic006G226200 Sobic005G229100--Sobic003G387500 Sobic001G399200 Sobic001G399200 Sobic005G229100--Sobic001G399200 Sobic003G387500--Sobic001G406700 Sobic003G387500--Sobic006G144600 Sobic003G387500--Sobic001G224300 Sobic003G387500--Sobic010G232500 Sobic002G167600 Sobic002G167600 Sobic003G387500--Sobic002G167600 Sobic009G170500 Sobic009G170500 Sobic003G387500--Sobic009G170500 Sobic009G162700 Sobic009G162700 Sobic003G387500--Sobic009G162700 Sobic003G387500--Sobic002G205500 Sobic003G387500--Sobic009G226900 Sobic009G048000--Sobic006G226200 Sobic009G048000--Sobic003G296400 Sobic009G048000--Sobic002G205500 Sobic009G048000--Sobic003G236701 Sobic001G468300 Sobic001G468300 Sobic009G048000--Sobic001G468300 Sobic009G048000--Sobic009G226900 Sobic009G048000--Sobic001G224300 Sobic009G048000--Sobic003G112200 Sobic009G048000--Sobic007G223600 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic003G062000 Sobic003G062000 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic006G036400--Sobic001G409100 Sobic006G036400--Sobic009G034300 Sobic006G036400--Sobic009G226900 Sobic001G360800 Sobic001G360800 Sobic006G036400--Sobic001G360800 Sobic006G036400--Sobic004G221300 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic009G226900--Sobic002G205500 Sobic009G226900--Sobic003G387500 Sobic009G226900--Sobic006G036400 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000
Octagon: transcription factors


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