Gene annotation
Transcriptome id Sobic.008G059800.1
Synonym Sb08g005040
Functional annotation expressed protein
UniProt C5YT59
Pfam -
Panther DB PTHR32054 PTHR32054:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G58070 : -
RAP-DB (Rice) LOC_Os12g08160.1 : expressed protein
MaizeGDB (Corn) Zm00025a054087
Brachypodium KQJ91988
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
2 Sobic.003G236701 - -
3 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
4 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
5 Sobic.010G199700 STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed -
6 Sobic.007G223600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
7 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
8 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
9 Sobic.006G066500 expressed protein -
10 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
11 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
12 Sobic.003G112200 Cupin domain containing protein, expressed -
13 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
14 Sobic.006G209300 transferase family domain containing protein, expressed -
15 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
16 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
17 Sobic.002G003200 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.004G344200 HEAT repeat family protein, putative, expressed K16578: CLIP-associating protein 1/2
19 Sobic.003G231500 pectinesterase, putative, expressed K01051: pectinesterase
20 Sobic.005G087200 plant-specific domain TIGR01627 family protein, expressed K18801: glucuronoxylan 4-O-methyltransferase


Gene co-expression network
sample Sobic008G059800 Sobic008G059800 Sobic002G164600 Sobic002G164600 Sobic008G059800--Sobic002G164600 Sobic003G236701 Sobic003G236701 Sobic008G059800--Sobic003G236701 Sobic009G241600 Sobic009G241600 Sobic008G059800--Sobic009G241600 Sobic009G153800 Sobic009G153800 Sobic008G059800--Sobic009G153800 Sobic010G199700 Sobic010G199700 Sobic008G059800--Sobic010G199700 Sobic007G223600 Sobic007G223600 Sobic008G059800--Sobic007G223600 Sobic008G112200 Sobic008G112200 Sobic008G059800--Sobic008G112200 Sobic009G226900 Sobic009G226900 Sobic008G059800--Sobic009G226900 Sobic006G066500 Sobic006G066500 Sobic008G059800--Sobic006G066500 Sobic002G164600--Sobic003G236701 Sobic002G164600--Sobic007G223600 Sobic002G164600--Sobic008G059800 Sobic006G226200 Sobic006G226200 Sobic002G164600--Sobic006G226200 Sobic003G112200 Sobic003G112200 Sobic002G164600--Sobic003G112200 Sobic002G164600--Sobic006G066500 Sobic006G209300 Sobic006G209300 Sobic002G164600--Sobic006G209300 Sobic002G164600--Sobic009G241600 Sobic005G229100 Sobic005G229100 Sobic002G164600--Sobic005G229100 Sobic003G236701--Sobic006G066500 Sobic003G236701--Sobic002G164600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic003G236701--Sobic007G223600 Sobic003G236701--Sobic008G059800 Sobic003G231500 Sobic003G231500 Sobic003G236701--Sobic003G231500 Sobic001G238600 Sobic001G238600 Sobic003G236701--Sobic001G238600 Sobic009G241600--Sobic003G236701 Sobic007G027200 Sobic007G027200 Sobic009G241600--Sobic007G027200 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic009G241600--Sobic008G112200 Sobic009G241600--Sobic003G112200 Sobic006G166800 Sobic006G166800 Sobic009G241600--Sobic006G166800 Sobic009G153800--Sobic008G059800 Sobic002G003200 Sobic002G003200 Sobic009G153800--Sobic002G003200 Sobic004G344200 Sobic004G344200 Sobic009G153800--Sobic004G344200 Sobic009G153800--Sobic010G199700 Sobic003G352800 Sobic003G352800 Sobic009G153800--Sobic003G352800 Sobic009G153800--Sobic008G112200 Sobic009G153800--Sobic002G164600 Sobic009G153800--Sobic009G241600 Sobic009G153800--Sobic003G236701 Sobic010G199700--Sobic009G241600 Sobic010G199700--Sobic008G112200 Sobic010G199700--Sobic007G027200 Sobic010G199700--Sobic008G059800 Sobic003G153400 Sobic003G153400 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic010G199700--Sobic003G236701 Sobic010G199700--Sobic006G166800 Sobic010G199700--Sobic009G153800 Sobic007G223600--Sobic002G164600 Sobic002G205500 Sobic002G205500 Sobic007G223600--Sobic002G205500 Sobic007G223600--Sobic006G226200 Sobic007G223600--Sobic003G236701 Sobic003G296400 Sobic003G296400 Sobic007G223600--Sobic003G296400 Sobic007G223600--Sobic005G229100 Sobic007G223600--Sobic006G066500 Sobic001G224300 Sobic001G224300 Sobic007G223600--Sobic001G224300 Sobic007G223600--Sobic008G059800 Sobic008G112200--Sobic010G199700 Sobic008G112200--Sobic009G241600 Sobic008G112200--Sobic008G059800 Sobic001G066900 Sobic001G066900 Sobic008G112200--Sobic001G066900 Sobic008G112200--Sobic003G236701 Sobic008G112200--Sobic009G153800 Sobic008G112200--Sobic001G468300 Sobic008G112200--Sobic002G164600 Sobic008G112200--Sobic009G226900 Sobic003G062000 Sobic003G062000 Sobic009G226900--Sobic003G062000 Sobic009G226900--Sobic001G224300 Sobic009G226900--Sobic003G296400 Sobic009G226900--Sobic002G205500 Sobic003G387500 Sobic003G387500 Sobic009G226900--Sobic003G387500 Sobic006G036400 Sobic006G036400 Sobic009G226900--Sobic006G036400 Sobic001G406700 Sobic001G406700 Sobic009G226900--Sobic001G406700 Sobic005G087200 Sobic005G087200 Sobic009G226900--Sobic005G087200 Sobic006G075000 Sobic006G075000 Sobic009G226900--Sobic006G075000 Sobic006G066500--Sobic003G236701 Sobic001G422300 Sobic001G422300 Sobic006G066500--Sobic001G422300 Sobic006G066500--Sobic006G226200 Sobic006G066500--Sobic003G112200 Sobic004G125400 Sobic004G125400 Sobic006G066500--Sobic004G125400 Sobic006G066500--Sobic001G238600 Sobic006G066500--Sobic003G231500 Sobic003G220000 Sobic003G220000 Sobic006G066500--Sobic003G220000 Sobic008G010400 Sobic008G010400 Sobic006G066500--Sobic008G010400
Octagon: transcription factors


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