Gene annotation
Transcriptome id Sobic.010G199700.2,Sobic.010G199700.1
Synonym SRF8, Sb10g024830
Functional annotation STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed
UniProt A0A194YKE7 , A0A194YKC1
Pfam PF08263 PF00560 PF00069
Panther DB PTHR27001 PTHR27001:SF94
NCBI CDD KOG1187; Serine/threonine protein kinase KOG0581Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT4G22130 : STRUBBELIG-receptor family 8
RAP-DB (Rice) LOC_Os02g09740.1 : STRUBBELIG-RECEPTOR FAMILY 7 precursor, putative, expressed
MaizeGDB (Corn) Zm00025a042089 , Zm00025a051449
Brachypodium KQK17582 , PNT76586 , PNT76585
Barley HORVU7Hr1G092330.14 , HORVU7Hr1G092330.12 , HORVU7Hr1G092330.13 , HORVU7Hr1G092330.10 , HORVU7Hr1G092330.11 , HORVU7Hr1G092330.4 , HORVU7Hr1G092330.5 , HORVU7Hr1G092330.6 , HORVU7Hr1G092330.7 , HORVU7Hr1G092330.1 , HORVU7Hr1G092330.2 , HORVU7Hr1G092330.3 , HORVU7Hr1G092330.8 , HORVU7Hr1G092330.9 , HORVU5Hr1G070610.1 , HORVU6Hr1G034990.11 , HORVU6Hr1G034990.10 , HORVU6Hr1G034990.13 , HORVU6Hr1G034990.12 , HORVU6Hr1G034990.9 , HORVU6Hr1G034990.8 , HORVU6Hr1G034990.1 , HORVU6Hr1G034990.3 , HORVU6Hr1G034990.2 , HORVU6Hr1G034990.5 , HORVU6Hr1G034990.4 , HORVU6Hr1G034990.7 , HORVU6Hr1G034990.6
Wheat TraesCS6D02G161000 , TraesCS7A02G390300 , TraesCS6B02G199500 , TraesCS6A02G171300 , TraesCS7B02G291900 , TraesCS7B02G291900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G241600 Expressed in older stem(PubMedID : 28649278)@zinc finger C-x8-C-x5-C-x3-H type family protein, expressed K18753: butyrate response factor
2 Sobic.008G112200 Expressed in middle stem(PubMedID : 28649278)@myb-like DNA-binding domain containing protein, putative, expressed K09422: transcription factor MYB, plant
3 Sobic.007G027200 anthocyanidin 3-O-glucosyltransferase, putative, expressed -
4 Sobic.008G059800 expressed protein -
5 Sobic.003G153400 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.001G468300 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
7 Sobic.003G236701 - -
8 Sobic.006G166800 plastocyanin-like domain containing protein, putative, expressed -
9 Sobic.009G153800 protein kinase, putative, expressed K08857: NIMA (never in mitosis gene a)-related kinase 1/4/5
10 Sobic.002G164600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@microtubule-associated protein, putative, expressed -
11 Sobic.003G352800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Protein L-ascorbate oxidase precursor (Os)(PubMedID : 27208977)@laccase precursor protein, putative, expressed K05909: laccase
12 Sobic.009G048000 villin, putative, expressed K08017: advillin
13 Sobic.001G510200 estradiol 17-beta-dehydrogenase 12, putative, expressed K10251: HSD17B12, KAR, 17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase
14 Sobic.003G112200 Cupin domain containing protein, expressed -
15 Sobic.006G066500 expressed protein -
16 Sobic.002G332300 expressed protein -
17 Sobic.009G226900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@auxin-responsive protein, putative, expressed -
18 Sobic.001G066900 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@OsMan06 - Endo-Beta-Mannanase, expressed K19355: mannan endo-1,4-beta-mannosidase
19 Sobic.006G226200 kinesin motor domain containing protein, putative, expressed K10405: kinesin family member C1
20 Sobic.002G363200 saccharopine dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic010G199700 Sobic010G199700 Sobic009G241600 Sobic009G241600 Sobic010G199700--Sobic009G241600 Sobic008G112200 Sobic008G112200 Sobic010G199700--Sobic008G112200 Sobic007G027200 Sobic007G027200 Sobic010G199700--Sobic007G027200 Sobic008G059800 Sobic008G059800 Sobic010G199700--Sobic008G059800 Sobic003G153400 Sobic003G153400 Sobic010G199700--Sobic003G153400 Sobic001G468300 Sobic001G468300 Sobic010G199700--Sobic001G468300 Sobic003G236701 Sobic003G236701 Sobic010G199700--Sobic003G236701 Sobic006G166800 Sobic006G166800 Sobic010G199700--Sobic006G166800 Sobic009G153800 Sobic009G153800 Sobic010G199700--Sobic009G153800 Sobic009G241600--Sobic003G236701 Sobic009G241600--Sobic007G027200 Sobic006G066500 Sobic006G066500 Sobic009G241600--Sobic006G066500 Sobic009G241600--Sobic008G059800 Sobic002G164600 Sobic002G164600 Sobic009G241600--Sobic002G164600 Sobic009G241600--Sobic010G199700 Sobic009G241600--Sobic008G112200 Sobic003G112200 Sobic003G112200 Sobic009G241600--Sobic003G112200 Sobic009G241600--Sobic006G166800 Sobic008G112200--Sobic010G199700 Sobic008G112200--Sobic009G241600 Sobic008G112200--Sobic008G059800 Sobic001G066900 Sobic001G066900 Sobic008G112200--Sobic001G066900 Sobic008G112200--Sobic003G236701 Sobic008G112200--Sobic009G153800 Sobic008G112200--Sobic001G468300 Sobic008G112200--Sobic002G164600 Sobic009G226900 Sobic009G226900 Sobic008G112200--Sobic009G226900 Sobic007G027200--Sobic006G166800 Sobic001G510200 Sobic001G510200 Sobic007G027200--Sobic001G510200 Sobic007G027200--Sobic009G241600 Sobic002G394700 Sobic002G394700 Sobic007G027200--Sobic002G394700 Sobic007G027200--Sobic003G153400 Sobic007G027200--Sobic010G199700 Sobic003G352800 Sobic003G352800 Sobic007G027200--Sobic003G352800 Sobic009G162800 Sobic009G162800 Sobic007G027200--Sobic009G162800 Sobic007G043800 Sobic007G043800 Sobic007G027200--Sobic007G043800 Sobic008G059800--Sobic002G164600 Sobic008G059800--Sobic003G236701 Sobic008G059800--Sobic009G241600 Sobic008G059800--Sobic009G153800 Sobic008G059800--Sobic010G199700 Sobic007G223600 Sobic007G223600 Sobic008G059800--Sobic007G223600 Sobic008G059800--Sobic008G112200 Sobic008G059800--Sobic009G226900 Sobic008G059800--Sobic006G066500 Sobic003G153400--Sobic006G166800 Sobic003G153400--Sobic007G027200 Sobic008G173200 Sobic008G173200 Sobic003G153400--Sobic008G173200 Sobic003G153400--Sobic010G199700 Sobic009G151000 Sobic009G151000 Sobic003G153400--Sobic009G151000 Sobic010G196400 Sobic010G196400 Sobic003G153400--Sobic010G196400 Sobic003G153400--Sobic009G162800 Sobic003G153400--Sobic007G043800 Sobic010G112800 Sobic010G112800 Sobic003G153400--Sobic010G112800 Sobic001G468300--Sobic003G236701 Sobic009G048000 Sobic009G048000 Sobic001G468300--Sobic009G048000 Sobic001G468300--Sobic006G066500 Sobic001G468300--Sobic010G199700 Sobic001G468300--Sobic009G241600 Sobic002G332300 Sobic002G332300 Sobic001G468300--Sobic002G332300 Sobic001G468300--Sobic003G112200 Sobic006G226200 Sobic006G226200 Sobic001G468300--Sobic006G226200 Sobic001G468300--Sobic008G059800 Sobic003G236701--Sobic006G066500 Sobic003G236701--Sobic002G164600 Sobic003G236701--Sobic009G241600 Sobic003G236701--Sobic006G226200 Sobic003G236701--Sobic003G112200 Sobic003G236701--Sobic007G223600 Sobic003G236701--Sobic008G059800 Sobic003G231500 Sobic003G231500 Sobic003G236701--Sobic003G231500 Sobic001G238600 Sobic001G238600 Sobic003G236701--Sobic001G238600 Sobic006G166800--Sobic007G027200 Sobic006G166800--Sobic009G162800 Sobic006G166800--Sobic001G510200 Sobic006G166800--Sobic003G352800 Sobic006G166800--Sobic003G153400 Sobic006G166800--Sobic002G394700 Sobic006G166800--Sobic010G196400 Sobic006G166800--Sobic007G043800 Sobic006G166800--Sobic009G241600 Sobic009G153800--Sobic008G059800 Sobic002G003200 Sobic002G003200 Sobic009G153800--Sobic002G003200 Sobic004G344200 Sobic004G344200 Sobic009G153800--Sobic004G344200 Sobic009G153800--Sobic010G199700 Sobic009G153800--Sobic003G352800 Sobic009G153800--Sobic008G112200 Sobic009G153800--Sobic002G164600 Sobic009G153800--Sobic009G241600 Sobic009G153800--Sobic003G236701
Octagon: transcription factors


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